RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 TRAF5O00463 557 aa22.94■■□□□ 1.26
VEGFA-222ENST00000520948 ZKSCAN2Q63HK3 967 aa22.94■■□□□ 1.26
VEGFA-222ENST00000520948 WBP1LQ9NX94 342 aa22.94■■□□□ 1.26
VEGFA-222ENST00000520948 WDR33Q9C0J8 1336 aaKnown RBP22.93■■□□□ 1.26
VEGFA-222ENST00000520948 RTL5Q5HYW3 569 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-222ENST00000520948 DPP8Q6V1X1 898 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-222ENST00000520948 USP50Q70EL3 339 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-222ENST00000520948 JARID2Q92833 1246 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-222ENST00000520948 PRDM10Q9NQV6 1147 aa22.93■■□□□ 1.26
VEGFA-222ENST00000520948 IRS4O14654 1257 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-222ENST00000520948 LBX1P52954 281 aa22.92■■□□□ 1.26
VEGFA-222ENST00000520948 CXCL9Q07325 125 aa22.92■■□□□ 1.26
VEGFA-222ENST00000520948 INTS3Q68E01 1043 aaKnown RBP22.92■■□□□ 1.26
VEGFA-222ENST00000520948 PAXIP1Q6ZW49 1069 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-222ENST00000520948 SUPT20HQ8NEM7 779 aa22.92■■□□□ 1.26
VEGFA-222ENST00000520948 GPRC5DQ9NZD1 345 aa22.92■■□□□ 1.26
VEGFA-222ENST00000520948 ZNRF3Q9ULT6 936 aa22.92■■□□□ 1.26
VEGFA-222ENST00000520948 UTYO14607 1347 aa22.91■■□□□ 1.26
VEGFA-222ENST00000520948 CCT4P50991 539 aaKnown RBP22.91■■□□□ 1.26
VEGFA-222ENST00000520948 GRM1Q13255 1194 aa22.91■■□□□ 1.26
VEGFA-222ENST00000520948 MPNDQ8N594 471 aa22.91■■□□□ 1.26
VEGFA-222ENST00000520948 RTFDC1Q9BY42 306 aaPredicted RBP22.91■■□□□ 1.26
VEGFA-222ENST00000520948 THSD7BQ9C0I4 1608 aa22.9■■□□□ 1.26
VEGFA-222ENST00000520948 GRM8O00222 908 aa22.9■■□□□ 1.26
VEGFA-222ENST00000520948 BBOX1O75936 387 aa22.9■■□□□ 1.26
VEGFA-222ENST00000520948 GMPSP49915 693 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-222ENST00000520948 SF3B3Q15393 1217 aaKnown RBP22.9■■□□□ 1.26
VEGFA-222ENST00000520948 DDX46Q7L014 1031 aaKnown RBP22.9■■□□□ 1.26
VEGFA-222ENST00000520948 UBE3BQ7Z3V4 1068 aa22.9■■□□□ 1.26
VEGFA-222ENST00000520948 SP8Q8IXZ3 490 aa22.9■■□□□ 1.26
VEGFA-222ENST00000520948 PLA2G12BQ9BX93 195 aa22.9■■□□□ 1.26
VEGFA-222ENST00000520948 VPS33BQ9H267 617 aa22.9■■□□□ 1.26
VEGFA-222ENST00000520948 ADARB2Q9NS39 739 aaKnown RBP22.9■■□□□ 1.26
VEGFA-222ENST00000520948 DUOX1Q9NRD9 1551 aa22.89■■□□□ 1.26
VEGFA-222ENST00000520948 LRRC37AA6NMS7 1700 aa22.89■■□□□ 1.26
VEGFA-222ENST00000520948 PDE8AO60658 829 aa22.89■■□□□ 1.25
VEGFA-222ENST00000520948 GRAPQ13588 217 aa22.89■■□□□ 1.25
VEGFA-222ENST00000520948 GRAPLQ8TC17 118 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-222ENST00000520948 USP44Q9H0E7 712 aa22.89■■□□□ 1.25
VEGFA-222ENST00000520948 RAD17O75943 681 aa22.88■■□□□ 1.25
VEGFA-222ENST00000520948 HSPA8P11142 646 aaKnown RBP22.88■■□□□ 1.25
VEGFA-222ENST00000520948 HSP90B1P14625 803 aaKnown RBP22.88■■□□□ 1.25
VEGFA-222ENST00000520948 CST9Q5W186 159 aa22.88■■□□□ 1.25
VEGFA-222ENST00000520948 CAPNS2Q96L46 248 aa22.88■■□□□ 1.25
VEGFA-222ENST00000520948 NBPF7P0C2Y1 421 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-222ENST00000520948 KIAA2012Q0VF49 1180 aa22.87■■□□□ 1.25
VEGFA-222ENST00000520948 CIAPIN1Q6FI81 312 aa22.87■■□□□ 1.25
VEGFA-222ENST00000520948 CYP4F22Q6NT55 531 aa22.87■■□□□ 1.25
VEGFA-222ENST00000520948 CLUAP1Q96AJ1 413 aa22.87■■□□□ 1.25
VEGFA-222ENST00000520948 C9orf78Q9NZ63 289 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-222ENST00000520948 MAP2K1Q02750 393 aaPredicted RBP22.86■■□□□ 1.25
VEGFA-222ENST00000520948 COL4A1P02462 1669 aa22.86■■□□□ 1.25
VEGFA-222ENST00000520948 MYH3P11055 1940 aa22.85■■□□□ 1.25
VEGFA-222ENST00000520948 RLBP1P12271 317 aa22.85■■□□□ 1.25
VEGFA-222ENST00000520948 DZIP1LQ8IYY4 767 aaKnown RBP22.85■■□□□ 1.25
VEGFA-222ENST00000520948 PLIN1O60240 522 aa22.84■■□□□ 1.25
VEGFA-222ENST00000520948 CSF1RP07333 972 aa22.84■■□□□ 1.25
VEGFA-222ENST00000520948 ECE1P42892 770 aa22.84■■□□□ 1.25
VEGFA-222ENST00000520948 FOXO4P98177 505 aa22.84■■□□□ 1.25
VEGFA-222ENST00000520948 TMEM57Q8N5G2 664 aa22.84■■□□□ 1.25
VEGFA-222ENST00000520948 TTLL11Q8NHH1 800 aa22.84■■□□□ 1.25
VEGFA-222ENST00000520948 KAZALD1Q96I82 304 aa22.84■■□□□ 1.25
VEGFA-222ENST00000520948 GLIS2Q9BZE0 524 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-222ENST00000520948 SHTN1A0MZ66 631 aa22.83■■□□□ 1.25
VEGFA-222ENST00000520948 YDJCA8MPS7 323 aa22.83■■□□□ 1.25
VEGFA-222ENST00000520948 TRPM4Q8TD43 1214 aa22.83■■□□□ 1.25
VEGFA-222ENST00000520948 TLL2Q9Y6L7 1015 aa22.83■■□□□ 1.25
VEGFA-222ENST00000520948 CELF2O95319 508 aaKnown RBP22.82■■□□□ 1.24
VEGFA-222ENST00000520948 CTSWP56202 376 aa22.82■■□□□ 1.24
VEGFA-222ENST00000520948 TNIP1Q15025 636 aa22.82■■□□□ 1.24
VEGFA-222ENST00000520948 EPHA10Q5JZY3 1008 aa22.82■■□□□ 1.24
VEGFA-222ENST00000520948 CELF1Q92879 486 aaKnown RBP22.82■■□□□ 1.24
VEGFA-222ENST00000520948 GPR101Q96P66 508 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-222ENST00000520948 MS4A1P11836 297 aa22.81■■□□□ 1.24
VEGFA-222ENST00000520948 HIRAP54198 1017 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-222ENST00000520948 SUCLG2Q96I99 432 aa22.81■■□□□ 1.24
VEGFA-222ENST00000520948 ZNF408Q9H9D4 720 aa22.81■■□□□ 1.24
VEGFA-222ENST00000520948 AOC2O75106 756 aa22.8■■□□□ 1.24
VEGFA-222ENST00000520948 TMC4Q7Z404 712 aa22.8■■□□□ 1.24
VEGFA-222ENST00000520948 PANK1Q8TE04 598 aa22.8■■□□□ 1.24
VEGFA-222ENST00000520948 CNOT7Q9UIV1 285 aaKnown RBP22.8■■□□□ 1.24
VEGFA-222ENST00000520948 NSFL1CQ9UNZ2 370 aaKnown RBP22.8■■□□□ 1.24
VEGFA-222ENST00000520948 ZBTB12Q9Y330 459 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-222ENST00000520948 RTL9Q8NET4 1388 aa22.79■■□□□ 1.24
VEGFA-222ENST00000520948 RIMBP2O15034 1052 aa22.79■■□□□ 1.24
VEGFA-222ENST00000520948 PDE3AQ14432 1141 aa22.79■■□□□ 1.24
VEGFA-222ENST00000520948 CCDC152Q4G0S7 254 aa22.79■■□□□ 1.24
VEGFA-222ENST00000520948 FTSJ3Q8IY81 847 aaKnown RBP22.79■■□□□ 1.24
VEGFA-222ENST00000520948 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-222ENST00000520948 MEIS3Q99687 375 aa22.79■■□□□ 1.24
VEGFA-222ENST00000520948 BEGAINQ9BUH8 593 aa22.79■■□□□ 1.24
VEGFA-222ENST00000520948 DBNDD1Q9H9R9 158 aa22.79■■□□□ 1.24
VEGFA-222ENST00000520948 TSKSQ9UJT2 592 aa22.79■■□□□ 1.24
VEGFA-222ENST00000520948 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
VEGFA-222ENST00000520948 SAPCD2Q86UD0 394 aa22.78■■□□□ 1.24
VEGFA-222ENST00000520948 MICALL2Q8IY33 904 aa22.78■■□□□ 1.24
VEGFA-222ENST00000520948 SEC31BQ9NQW1 1179 aa22.78■■□□□ 1.24
VEGFA-222ENST00000520948 PGAP2Q9UHJ9 254 aa22.78■■□□□ 1.24
VEGFA-222ENST00000520948 C6orf229H3BNL8 230 aa22.77■■□□□ 1.24
VEGFA-222ENST00000520948 ZBTB7BO15156 539 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms