RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	FKBP1B	P68106	108 aa		10.66	□□□□□ -0.7
PTK2-223	ENST00000520828	HSP90AB3P	Q58FF7	597 aa		10.66	□□□□□ -0.7
PTK2-223	ENST00000520828	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.66	□□□□□ -0.7
PTK2-223	ENST00000520828	DUOX1	Q9NRD9	1551 aa		10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	SH3TC1	Q8TE82	1336 aa		10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	NEFM	P07197	916 aa		10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	MKRN4P	Q13434	485 aa	Predicted RBP	10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	NOM1	Q5C9Z4	860 aa	Known RBP	10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	NLRP10	Q86W26	655 aa		10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	EYA3	Q99504	573 aa		10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	THUMPD2	Q9BTF0	503 aa	Known RBP	10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	TRMT112	Q9UI30	125 aa	Known RBP	10.65	□□□□□ -0.7
PTK2-223	ENST00000520828	RTL9	Q8NET4	1388 aa		10.65	□□□□□ -0.71
PTK2-223	ENST00000520828	ASTN2	O75129	1339 aa	Predicted RBP	10.64	□□□□□ -0.71
PTK2-223	ENST00000520828	GPR25	O00155	361 aa		10.64	□□□□□ -0.71
PTK2-223	ENST00000520828	DOK7	Q18PE1	504 aa		10.64	□□□□□ -0.71
PTK2-223	ENST00000520828	ANGEL2	Q5VTE6	544 aa	Known RBP	10.64	□□□□□ -0.71
PTK2-223	ENST00000520828	KCNQ5	Q9NR82	932 aa		10.64	□□□□□ -0.71
PTK2-223	ENST00000520828	KDM3B	Q7LBC6	1761 aa		10.64	□□□□□ -0.71
PTK2-223	ENST00000520828	ANKRD36C	Q5JPF3	1778 aa		10.63	□□□□□ -0.71
PTK2-223	ENST00000520828		G3V3G9	751 aa		10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	FKTN	O75072	461 aa		10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	VIL1	P09327	827 aa	Known RBP	10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	EIF2S2	P20042	333 aa	Known RBP	10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	FXR2	P51116	673 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	SCARF1	Q14162	830 aa		10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	DCAF8	Q5TAQ9	597 aa		10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	LRP10	Q7Z4F1	713 aa		10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	POLL	Q9UGP5	575 aa		10.63	□□□□□ -0.71
PTK2-223	ENST00000520828	LAMB2	P55268	1798 aa		10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	PAPPA2	Q9BXP8	1791 aa		10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	LRRC37A	A6NMS7	1700 aa		10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	UBE2Q2L	H0YL09	131 aa		10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	TM4SF4	P48230	202 aa		10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	GPSM2	P81274	684 aa		10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	SREBF2	Q12772	1141 aa		10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	TCIRG1	Q13488	830 aa		10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.62	□□□□□ -0.71
PTK2-223	ENST00000520828	PITPNM2	Q9BZ72	1349 aa		10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	ANXA1	P04083	346 aa		10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	ZNF280A	P59817	542 aa	Predicted RBP	10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	AIMP1	Q12904	312 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	TTLL12	Q14166	644 aa	Predicted RBP	10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	PDIA6	Q15084	440 aa		10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	PROSER3	Q2NL68	480 aa		10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	INTS3	Q68E01	1043 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	MOB2	Q70IA6	237 aa		10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	COPS6	Q7L5N1	327 aa		10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	AGBL3	Q8NEM8	1001 aa		10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	TBC1D16	Q8TBP0	767 aa		10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	CELF1	Q92879	486 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	POLR2A	P24928	1970 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	DDX60	Q8IY21	1712 aa	Known RBP	10.61	□□□□□ -0.71
PTK2-223	ENST00000520828	PPP2R1A	P30153	589 aa		10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	FXR1	P51114	621 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	MKRN3	Q13064	507 aa	Known RBP	10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	SF3B3	Q15393	1217 aa	Known RBP	10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	XAGE3	Q8WTP9	111 aa		10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	NECTIN2	Q92692	538 aa		10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	CFHR5	Q9BXR6	569 aa		10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	MYOZ2	Q9NPC6	264 aa		10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	TSPYL4	Q9UJ04	414 aa		10.6	□□□□□ -0.71
PTK2-223	ENST00000520828	ZNF609	O15014	1411 aa		10.59	□□□□□ -0.71
PTK2-223	ENST00000520828	USP17L8	P0C7I0	530 aa		10.59	□□□□□ -0.71
PTK2-223	ENST00000520828	NF2	P35240	595 aa		10.59	□□□□□ -0.71
PTK2-223	ENST00000520828	NFE2L2	Q16236	605 aa		10.59	□□□□□ -0.71
PTK2-223	ENST00000520828	ZNF428	Q96B54	188 aa		10.59	□□□□□ -0.71
PTK2-223	ENST00000520828	POTEF	A5A3E0	1075 aa		10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	UFL1	O94874	794 aa		10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	ALDH1A1	P00352	501 aa		10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	RPS8	P62241	208 aa	Known RBP	10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	PRAMEF18	Q5VWM3	479 aa		10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	FAM89A	Q96GI7	184 aa		10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	PODXL2	Q9NZ53	605 aa		10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	ANKIB1	Q9P2G1	1089 aa		10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	SCAF8	Q9UPN6	1271 aa	Known RBP	10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	TRIM17	Q9Y577	477 aa		10.58	□□□□□ -0.72
PTK2-223	ENST00000520828	TAF1	P21675	1872 aa		10.57	□□□□□ -0.72
PTK2-223	ENST00000520828	SP7	Q8TDD2	431 aa	Predicted RBP	10.57	□□□□□ -0.72
PTK2-223	ENST00000520828	R3HDML	Q9H3Y0	253 aa		10.57	□□□□□ -0.72
PTK2-223	ENST00000520828	GGA1	Q9UJY5	639 aa		10.57	□□□□□ -0.72
PTK2-223	ENST00000520828	USP17L3	A6NCW0	530 aa		10.56	□□□□□ -0.72
PTK2-223	ENST00000520828	USP17L4	A6NCW7	530 aa		10.56	□□□□□ -0.72
PTK2-223	ENST00000520828	OTOP1	Q7RTM1	612 aa		10.56	□□□□□ -0.72
PTK2-223	ENST00000520828	USP17L1	Q7RTZ2	530 aa		10.56	□□□□□ -0.72
PTK2-223	ENST00000520828	ARMC9	Q7Z3E5	817 aa		10.56	□□□□□ -0.72
PTK2-223	ENST00000520828	GML	Q99445	158 aa		10.56	□□□□□ -0.72
PTK2-223	ENST00000520828	MAPK8IP3	Q9UPT6	1336 aa		10.56	□□□□□ -0.72
PTK2-223	ENST00000520828	IRS4	O14654	1257 aa	Predicted RBP	10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	PTPN12	Q05209	780 aa	Known RBP	10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	NBPF9	Q3BBW0	867 aa		10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	RTL5	Q5HYW3	569 aa	Predicted RBP	10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	SPRYD7	Q5W111	196 aa		10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	PODN	Q7Z5L7	613 aa		10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	PLEKHF1	Q96S99	279 aa		10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	ISCA1	Q9BUE6	129 aa		10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	PNN	Q9H307	717 aa	Known RBP	10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	BABAM1	Q9NWV8	329 aa		10.55	□□□□□ -0.72
PTK2-223	ENST00000520828	SSUH2	Q9Y2M2	353 aa		10.55	□□□□□ -0.72

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