RNA–Protein interactions for RNA: ENST00000520655.5

IKBKB-216, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 2

Gene IKBKB, Length 3,777 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-216	ENST00000520655	CAVIN4	Q5BKX8	364 aa		13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	CPA1	P15085	419 aa		13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	RPS8	P62241	208 aa	Known RBP	13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	R3HDM1	Q15032	1099 aa	Known RBP	13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	C3orf67	Q6ZVT6	689 aa		13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	FOXO4	P98177	505 aa		13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	ANTXR1	Q9H6X2	564 aa		13.69	□□□□□ -0.22
IKBKB-216	ENST00000520655	RGS12	O14924	1447 aa		13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	STK3	Q13188	491 aa		13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	RAB11FIP4	Q86YS3	637 aa		13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	GZF1	Q9H116	711 aa	Predicted RBP	13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	ZAP70	P43403	619 aa		13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	PHKA1	P46020	1223 aa		13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	NMI	Q13287	307 aa	Predicted RBP	13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	OLFM4	Q6UX06	510 aa		13.68	□□□□□ -0.22
IKBKB-216	ENST00000520655	SLIT2	O94813	1529 aa		13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	UFL1	O94874	794 aa		13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	NCL	P19338	710 aa	Known RBP	13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	LRRC2	Q9BYS8	371 aa		13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	ERVV-1	B6SEH8	477 aa		13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	ZKSCAN1	P17029	563 aa	Predicted RBP	13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	CHRND	Q07001	517 aa		13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	SLC51A	Q86UW1	340 aa		13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	GNL3L	Q9NVN8	582 aa	Known RBP	13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	SLC9C2	Q5TAH2	1124 aa		13.67	□□□□□ -0.22
IKBKB-216	ENST00000520655	COL23A1	Q86Y22	540 aa	Predicted RBP	13.66	□□□□□ -0.22
IKBKB-216	ENST00000520655	MINDY4B	A8MYZ0	360 aa		13.66	□□□□□ -0.22
IKBKB-216	ENST00000520655	CHRNA5	P30532	468 aa		13.66	□□□□□ -0.22
IKBKB-216	ENST00000520655	ZNF827	Q17R98	1081 aa		13.66	□□□□□ -0.22
IKBKB-216	ENST00000520655	PAG1	Q9NWQ8	432 aa		13.66	□□□□□ -0.22
IKBKB-216	ENST00000520655	POLA2	Q14181	598 aa		13.65	□□□□□ -0.22
IKBKB-216	ENST00000520655	DOK7	Q18PE1	504 aa		13.65	□□□□□ -0.22
IKBKB-216	ENST00000520655	JAKMIP1	Q96N16	626 aa	Known RBP	13.65	□□□□□ -0.22
IKBKB-216	ENST00000520655	COPRS	Q9NQ92	184 aa		13.65	□□□□□ -0.22
IKBKB-216	ENST00000520655	CHST3	Q7LGC8	479 aa		13.65	□□□□□ -0.23
IKBKB-216	ENST00000520655	AIDA	Q96BJ3	306 aa		13.65	□□□□□ -0.23
IKBKB-216	ENST00000520655	CHML	P26374	656 aa		13.64	□□□□□ -0.23
IKBKB-216	ENST00000520655	ZNF34	Q8IZ26	560 aa		13.64	□□□□□ -0.23
IKBKB-216	ENST00000520655	ATP10D	Q9P241	1426 aa		13.64	□□□□□ -0.23
IKBKB-216	ENST00000520655	ST18	O60284	1047 aa		13.64	□□□□□ -0.23
IKBKB-216	ENST00000520655	LRP10	Q7Z4F1	713 aa		13.64	□□□□□ -0.23
IKBKB-216	ENST00000520655	EVI5L	Q96CN4	794 aa		13.64	□□□□□ -0.23
IKBKB-216	ENST00000520655	COL16A1	Q07092	1604 aa	Predicted RBP	13.64	□□□□□ -0.23
IKBKB-216	ENST00000520655	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.64	□□□□□ -0.23
IKBKB-216	ENST00000520655	DZIP1	Q86YF9	867 aa	Known RBP	13.63	□□□□□ -0.23
IKBKB-216	ENST00000520655	C2CD5	Q86YS7	1000 aa		13.63	□□□□□ -0.23
IKBKB-216	ENST00000520655	NLGN1	Q8N2Q7	840 aa		13.63	□□□□□ -0.23
IKBKB-216	ENST00000520655	ESYT1	Q9BSJ8	1104 aa		13.63	□□□□□ -0.23
IKBKB-216	ENST00000520655		A0A0U1RQG5	324 aa	Predicted RBP	13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	TDO2	P48775	406 aa		13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	MAGEB6	Q8N7X4	407 aa		13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	NOL10	Q9BSC4	688 aa	Known RBP	13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	SCARF1	Q14162	830 aa		13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	3e-6	■■■■□ 24.2
IKBKB-216	ENST00000520655	PDE8B	O95263	885 aa		13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	GYS1	P13807	737 aa		13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	CAST	P20810	708 aa	Known RBP	13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	PUM3	Q15397	648 aa	Known RBP	13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	CCDC102B	Q68D86	513 aa		13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	PRR5L	Q6MZQ0	368 aa		13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	COL14A1	Q05707	1796 aa	Known RBP	13.62	□□□□□ -0.23
IKBKB-216	ENST00000520655	NTSR2	O95665	410 aa		13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655	CYP7A1	P22680	504 aa		13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655		A0A0D9SFI3	127 aa		13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655	PROM2	Q8N271	834 aa		13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655	PIBF1	Q8WXW3	757 aa		13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655	BCS1L	Q9Y276	419 aa		13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655	DISP2	A7MBM2	1401 aa		13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655		H0YIN7	160 aa		13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655	RBM26	Q5T8P6	1007 aa	Known RBP	13.61	□□□□□ -0.23
IKBKB-216	ENST00000520655	ATG9A	Q7Z3C6	839 aa		13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	RGS17	Q9UGC6	210 aa	Predicted RBP	13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	RGPD1	P0DJD0	1748 aa		13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	USP42	Q9H9J4	1324 aa	Known RBP	13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	MAP3K12	Q12852	859 aa		13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	CLEC4G	Q6UXB4	293 aa		13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	RALYL	Q86SE5	291 aa	Known RBP	13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	BCL2L12	Q9HB09	334 aa		13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	NHSL1	Q5SYE7	1610 aa		13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	SLC27A3	Q5K4L6	730 aa		13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655	CCDC82	Q8N4S0	544 aa		13.6	□□□□□ -0.23
IKBKB-216	ENST00000520655		A0A0G2JLW4	131 aa		13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	POLD1	P28340	1107 aa		13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	ATP2B2	Q01814	1243 aa		13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	RBM17	Q96I25	401 aa	Known RBP	13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	MARF1	Q9Y4F3	1742 aa	Known RBP	13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	KLRK1	P26718	216 aa		13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	RNF20	Q5VTR2	975 aa		13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	HIBADH	P31937	336 aa	Known RBP	13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	TRDN	Q13061	729 aa		13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	NFXL1	Q6ZNB6	911 aa		13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	LPIN2	Q92539	896 aa		13.59	□□□□□ -0.23
IKBKB-216	ENST00000520655	DBNDD1	Q9H9R9	158 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms