RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 BRCA2P51587 3418 aa6.66□□□□□ -1.34
SDCBP-207ENST00000520168 RBBP6Q7Z6E9 1792 aaKnown RBP6.65□□□□□ -1.34
SDCBP-207ENST00000520168 NUP98P52948 1817 aa6.65□□□□□ -1.34
SDCBP-207ENST00000520168 RNMTO43148 476 aaKnown RBP6.65□□□□□ -1.34
SDCBP-207ENST00000520168 AOC2O75106 756 aa6.65□□□□□ -1.34
SDCBP-207ENST00000520168 SCNN1DP51172 638 aa6.65□□□□□ -1.34
SDCBP-207ENST00000520168 SLC39A6Q13433 755 aa6.65□□□□□ -1.34
SDCBP-207ENST00000520168 SULT6B1Q6IMI4 303 aa6.65□□□□□ -1.34
SDCBP-207ENST00000520168 TPTE2Q6XPS3 522 aa6.65□□□□□ -1.34
SDCBP-207ENST00000520168 NBPF5PQ86XG9 351 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-207ENST00000520168 SYNE4Q8N205 404 aa6.65□□□□□ -1.34
SDCBP-207ENST00000520168 ZC3H15Q8WU90 426 aaKnown RBP6.65□□□□□ -1.34
SDCBP-207ENST00000520168 VPS33BQ9H267 617 aa6.65□□□□□ -1.34
SDCBP-207ENST00000520168 ADARB2Q9NS39 739 aaKnown RBP6.65□□□□□ -1.34
SDCBP-207ENST00000520168 HEG1Q9ULI3 1381 aa6.65□□□□□ -1.35
SDCBP-207ENST00000520168 DDX60Q8IY21 1712 aaKnown RBP6.64□□□□□ -1.35
SDCBP-207ENST00000520168 LAMB4A4D0S4 1761 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 CELF2O95319 508 aaKnown RBP6.64□□□□□ -1.35
SDCBP-207ENST00000520168 TNNT2P45379 298 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-207ENST00000520168 SOX10P56693 466 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 CAMK2BQ13554 666 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 PKN2Q16513 984 aaKnown RBP6.64□□□□□ -1.35
SDCBP-207ENST00000520168 C6orf132Q5T0Z8 1188 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 CIAPIN1Q6FI81 312 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 AEBP1Q8IUX7 1158 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 TSHZ2Q9NRE2 1034 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 TBC1D2BQ9UPU7 963 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 GJA3Q9Y6H8 435 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 RIC1Q4ADV7 1423 aa6.64□□□□□ -1.35
SDCBP-207ENST00000520168 CAMTA2O94983 1202 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 COL4A5P29400 1685 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 EPS15P42566 896 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 HTTP42858 3142 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 KCNC4Q03721 635 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 CTU1Q7Z7A3 348 aaKnown RBP6.63□□□□□ -1.35
SDCBP-207ENST00000520168 CCDC24Q8N4L8 307 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 CCDC102AQ96A19 550 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 LGR6Q9HBX8 967 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 GPRC5DQ9NZD1 345 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 PGAP2Q9UHJ9 254 aa6.63□□□□□ -1.35
SDCBP-207ENST00000520168 ZNF330Q9Y3S2 320 aaPredicted RBP6.63□□□□□ -1.35
SDCBP-207ENST00000520168 POLR2AP24928 1970 aaKnown RBP6.62□□□□□ -1.35
SDCBP-207ENST00000520168 KIF7Q2M1P5 1343 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 TRIM6-TRIM34B2RNG4 842 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 TRAF5O00463 557 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 ZNF790Q6PG37 636 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 CDC37L1Q7L3B6 337 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 DZIP3Q86Y13 1208 aaKnown RBP6.62□□□□□ -1.35
SDCBP-207ENST00000520168 NIM1KQ8IY84 436 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 LARGE2Q8N3Y3 721 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 FMNL2Q96PY5 1086 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 NYXQ9GZU5 481 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 TMX4Q9H1E5 349 aaPredicted RBP6.62□□□□□ -1.35
SDCBP-207ENST00000520168 SZT2Q5T011 3432 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 ANKRD36CQ5JPF3 1778 aa6.62□□□□□ -1.35
SDCBP-207ENST00000520168 GTF2E1P29083 439 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-207ENST00000520168 IL13P35225 146 aa6.61□□□□□ -1.35
SDCBP-207ENST00000520168 HUNKP57058 714 aa6.61□□□□□ -1.35
SDCBP-207ENST00000520168 TEFQ10587 303 aa6.61□□□□□ -1.35
SDCBP-207ENST00000520168 CRY2Q49AN0 593 aa6.61□□□□□ -1.35
SDCBP-207ENST00000520168 ZNF496Q96IT1 587 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-207ENST00000520168 SEPT9Q9UHD8 586 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-207ENST00000520168 IBTKQ9P2D0 1353 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-207ENST00000520168 DPYSL4O14531 572 aa6.6□□□□□ -1.35
SDCBP-207ENST00000520168 FMR1Q06787 632 aaKnown RBP eCLIP6.6□□□□□ -1.35
SDCBP-207ENST00000520168 HABP4Q5JVS0 413 aaKnown RBP6.6□□□□□ -1.35
SDCBP-207ENST00000520168 RGMBQ6NW40 437 aa6.6□□□□□ -1.35
SDCBP-207ENST00000520168 SUPT20HQ8NEM7 779 aa6.6□□□□□ -1.35
SDCBP-207ENST00000520168 RPGRQ92834 1020 aaKnown RBP6.6□□□□□ -1.35
SDCBP-207ENST00000520168 ZNF408Q9H9D4 720 aa6.6□□□□□ -1.35
SDCBP-207ENST00000520168 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-207ENST00000520168 TSR3Q9UJK0 312 aaKnown RBP6.6□□□□□ -1.35
SDCBP-207ENST00000520168 NIP7Q9Y221 180 aaKnown RBP eCLIP6.6□□□□□ -1.35
SDCBP-207ENST00000520168 LAMB2P55268 1798 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 NPC1L1Q9UHC9 1359 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 FAM155AB1AL88 458 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-207ENST00000520168 PPIP5K2O43314 1243 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 A1BGP04217 495 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 HOXA10P31260 410 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-207ENST00000520168 TNIP1Q15025 636 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 MTHFSDQ2M296 383 aaKnown RBP6.59□□□□□ -1.35
SDCBP-207ENST00000520168 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
SDCBP-207ENST00000520168 OLFM4Q6UX06 510 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 MORC1Q86VD1 984 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 C2orf69Q8N8R5 385 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 LRCH3Q96II8 777 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 GLIS2Q9BZE0 524 aaPredicted RBP6.59□□□□□ -1.35
SDCBP-207ENST00000520168 RNF186Q9NXI6 227 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 HPS5Q9UPZ3 1129 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 LAMB1P07942 1786 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 PAPPA2Q9BXP8 1791 aa6.59□□□□□ -1.35
SDCBP-207ENST00000520168 COL6A3P12111 3177 aa6.59□□□□□ -1.36
SDCBP-207ENST00000520168 LRRC37AA6NMS7 1700 aa6.59□□□□□ -1.36
SDCBP-207ENST00000520168 A0A0C4DFX4 3053 aa6.58□□□□□ -1.36
SDCBP-207ENST00000520168 GNAT3A8MTJ3 354 aa6.58□□□□□ -1.36
SDCBP-207ENST00000520168 H7C1D1 291 aa6.58□□□□□ -1.36
SDCBP-207ENST00000520168 PPEF1O14829 653 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-207ENST00000520168 TRPA1O75762 1119 aa6.58□□□□□ -1.36
SDCBP-207ENST00000520168 ZNF157P51786 506 aaPredicted RBP6.58□□□□□ -1.36
SDCBP-207ENST00000520168 GAS2L2Q8NHY3 880 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms