RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PPM1HQ9ULR3 514 aa8.26□□□□□ -1.09
HMGB1P46-201ENST00000520062 DCDC2BA2VCK2 349 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 GFRA3O60609 400 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 KIF4AO95239 1232 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 PSAPP07602 524 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 TARSP26639 723 aaKnown RBP8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 RACK1P63244 317 aaKnown RBP8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 ZNF394Q53GI3 561 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 PEAR1Q5VY43 1037 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 C3orf58Q8NDZ4 430 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 ARMC5Q96C12 935 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 TLR7Q9NYK1 1049 aaKnown RBP8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 MARK1Q9P0L2 795 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 ZFATQ9P243 1243 aa8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P46-201ENST00000520062 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
HMGB1P46-201ENST00000520062 KRT25Q7Z3Z0 450 aa8.24□□□□□ -1.09
HMGB1P46-201ENST00000520062 KIFC2Q96AC6 838 aa8.24□□□□□ -1.09
HMGB1P46-201ENST00000520062 TANGO6Q9C0B7 1094 aa8.24□□□□□ -1.09
HMGB1P46-201ENST00000520062 ZFYVE1Q9HBF4 777 aa8.24□□□□□ -1.09
HMGB1P46-201ENST00000520062 AAASQ9NRG9 546 aa8.24□□□□□ -1.09
HMGB1P46-201ENST00000520062 KANSL3Q9P2N6 904 aa8.24□□□□□ -1.09
HMGB1P46-201ENST00000520062 INPP5FQ9Y2H2 1132 aa8.24□□□□□ -1.09
HMGB1P46-201ENST00000520062 BNIP3LO60238 219 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 NFKB1P19838 968 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 PLAURQ03405 335 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 HYAL2Q12891 473 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 DBN1Q16643 649 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 FAM182BQ5T319 152 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 CCDC155Q8N6L0 562 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 SENP2Q9HC62 589 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 STRN4Q9NRL3 753 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 LATS2Q9NRM7 1088 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 ATXN7L1Q9ULK2 861 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 PCDHGB7Q9Y5F8 929 aa8.23□□□□□ -1.09
HMGB1P46-201ENST00000520062 NEUROD1Q13562 356 aa8.22□□□□□ -1.09
HMGB1P46-201ENST00000520062 PWP1Q13610 501 aa8.22□□□□□ -1.09
HMGB1P46-201ENST00000520062 RSRP1Q9BUV0 290 aa8.22□□□□□ -1.09
HMGB1P46-201ENST00000520062 LIN7BQ9HAP6 207 aa8.22□□□□□ -1.09
HMGB1P46-201ENST00000520062 ABCB6Q9NP58 842 aa8.22□□□□□ -1.09
HMGB1P46-201ENST00000520062 PRKAG2Q9UGJ0 569 aa8.22□□□□□ -1.09
HMGB1P46-201ENST00000520062 TTF2Q9UNY4 1162 aaKnown RBP8.22□□□□□ -1.09
HMGB1P46-201ENST00000520062 TMEM238LA0A1B0GVL6 79 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 RLBP1P12271 317 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 GJA8P48165 433 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 TNNI2P48788 182 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 NRLP54845 237 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 NCAPG2Q86XI2 1143 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 CCNJLQ8IV13 435 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 TCF12Q99081 682 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 OXCT2Q9BYC2 517 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 PPP1R1BQ9UD71 204 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
HMGB1P46-201ENST00000520062 SOBPA7XYQ1 873 aa8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 FCGRTP55899 365 aa8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 ARID5AQ03989 594 aa8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 DHX32Q7L7V1 743 aaKnown RBP8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 VPS37DQ86XT2 251 aa8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 ZNF837Q96EG3 531 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 ABHD17AQ96GS6 310 aa8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 ZKSCAN3Q9BRR0 538 aa8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 HCN2Q9UL51 889 aa8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P46-201ENST00000520062 ST8SIA5O15466 376 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 ATP2B1P20020 1258 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 ITGA6P23229 1130 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 CCDC85BQ15834 202 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 DTHD1Q6ZMT9 781 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 SV2BQ7L1I2 683 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 CEP120Q8N960 986 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 BHMTQ93088 406 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 CNTNAP3BQ96NU0 1288 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 OSMRQ99650 979 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 SLC30A3Q99726 388 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 CNTNAP3Q9BZ76 1288 aa8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 CUEDC1Q9NWM3 386 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P46-201ENST00000520062 CD33P20138 364 aa8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 GPLD1P80108 840 aa8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 GRIN2CQ14957 1233 aa8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 COL13A1Q5TAT6 717 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 SPACA7Q96KW9 195 aa8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 BHLHE41Q9C0J9 482 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 DZANK1Q9NVP4 752 aa8.18□□□□□ -1.1
HMGB1P46-201ENST00000520062 FGFR3P22607 806 aa8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 ITPKAP23677 461 aa8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 DNAJA1P31689 397 aaKnown RBP8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 PCSK7Q16549 785 aa8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 RASGRP4Q8TDF6 673 aa8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 SPATA32Q96LK8 384 aa8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 CEP44Q9C0F1 390 aa8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 COPRSQ9NQ92 184 aa8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 KBTBD4Q9NVX7 518 aa8.17□□□□□ -1.1
HMGB1P46-201ENST00000520062 MAP3K10Q02779 954 aa8.16□□□□□ -1.1
HMGB1P46-201ENST00000520062 RPS26P11Q5JNZ5 115 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms