RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ZNF589Q86UQ0 364 aaPredicted RBP22.23■■□□□ 1.15
FAM49B-214ENST00000519540 TMX3Q96JJ7 454 aa22.23■■□□□ 1.15
FAM49B-214ENST00000519540 CCNL1Q9UK58 526 aaPredicted RBP22.23■■□□□ 1.15
FAM49B-214ENST00000519540 SBF2Q86WG5 1849 aa22.23■■□□□ 1.15
FAM49B-214ENST00000519540 DDX60Q8IY21 1712 aaKnown RBP22.23■■□□□ 1.15
FAM49B-214ENST00000519540 RAB3GAP1Q15042 981 aa22.22■■□□□ 1.15
FAM49B-214ENST00000519540 TTC39AQ5SRH9 613 aa22.22■■□□□ 1.15
FAM49B-214ENST00000519540 SPEF2Q9C093 1822 aa22.22■■□□□ 1.15
FAM49B-214ENST00000519540 TAF5LO75529 589 aa22.21■■□□□ 1.15
FAM49B-214ENST00000519540 CHGBP05060 677 aa22.21■■□□□ 1.15
FAM49B-214ENST00000519540 QTRT2Q9H974 415 aaKnown RBP22.21■■□□□ 1.15
FAM49B-214ENST00000519540 CWC22Q9HCG8 908 aaKnown RBP22.21■■□□□ 1.15
FAM49B-214ENST00000519540 LRP5O75197 1615 aa22.21■■□□□ 1.15
FAM49B-214ENST00000519540 PDE8BO95263 885 aa22.21■■□□□ 1.15
FAM49B-214ENST00000519540 MCMDC2Q4G0Z9 681 aa22.21■■□□□ 1.15
FAM49B-214ENST00000519540 CREB3L3Q68CJ9 461 aa22.21■■□□□ 1.15
FAM49B-214ENST00000519540 SMIM5Q71RC9 77 aa22.21■■□□□ 1.15
FAM49B-214ENST00000519540 LAMB2P55268 1798 aa22.2■■□□□ 1.14
FAM49B-214ENST00000519540 KCNJ4P48050 445 aa22.2■■□□□ 1.14
FAM49B-214ENST00000519540 CCDC152Q4G0S7 254 aa22.2■■□□□ 1.14
FAM49B-214ENST00000519540 TTC14Q96N46 770 aa22.2■■□□□ 1.14
FAM49B-214ENST00000519540 LY75O60449 1722 aa22.2■■□□□ 1.14
FAM49B-214ENST00000519540 RTL9Q8NET4 1388 aa22.2■■□□□ 1.14
FAM49B-214ENST00000519540 ZKSCAN1P17029 563 aaPredicted RBP22.19■■□□□ 1.14
FAM49B-214ENST00000519540 SEC62Q99442 399 aaKnown RBP22.19■■□□□ 1.14
FAM49B-214ENST00000519540 TM6SF1Q9BZW5 370 aa22.19■■□□□ 1.14
FAM49B-214ENST00000519540 BCL2L12Q9HB09 334 aa22.19■■□□□ 1.14
FAM49B-214ENST00000519540 SEC31BQ9NQW1 1179 aa22.19■■□□□ 1.14
FAM49B-214ENST00000519540 NARFQ9UHQ1 456 aa22.19■■□□□ 1.14
FAM49B-214ENST00000519540 MROH5Q6ZUA9 1318 aa22.19■■□□□ 1.14
FAM49B-214ENST00000519540 MCM4P33991 863 aa22.19■■□□□ 1.14
FAM49B-214ENST00000519540 CUL4AQ13619 759 aa22.19■■□□□ 1.14
FAM49B-214ENST00000519540 ZGPATQ8N5A5 531 aaKnown RBP22.19■■□□□ 1.14
FAM49B-214ENST00000519540 TNPO1Q92973 898 aaKnown RBP22.19■■□□□ 1.14
FAM49B-214ENST00000519540 ABCC12Q96J65 1359 aa22.19■■□□□ 1.14
FAM49B-214ENST00000519540 SLC27A2O14975 620 aa22.18■■□□□ 1.14
FAM49B-214ENST00000519540 GNPATO15228 680 aa22.18■■□□□ 1.14
FAM49B-214ENST00000519540 FKBP4Q02790 459 aaKnown RBP eCLIP22.18■■□□□ 1.14
FAM49B-214ENST00000519540 ADCK5Q3MIX3 580 aa22.18■■□□□ 1.14
FAM49B-214ENST00000519540 HELLSQ9NRZ9 838 aa22.18■■□□□ 1.14
FAM49B-214ENST00000519540 SCN7AQ01118 1682 aa22.18■■□□□ 1.14
FAM49B-214ENST00000519540 CASTP20810 708 aaKnown RBP22.18■■□□□ 1.14
FAM49B-214ENST00000519540 USPL1Q5W0Q7 1092 aa22.18■■□□□ 1.14
FAM49B-214ENST00000519540 ZSWIM6Q9HCJ5 1215 aa22.18■■□□□ 1.14
FAM49B-214ENST00000519540 TAF1LQ8IZX4 1826 aa22.17■■□□□ 1.14
FAM49B-214ENST00000519540 SCARF1Q14162 830 aa22.17■■□□□ 1.14
FAM49B-214ENST00000519540 RNF20Q5VTR2 975 aa22.17■■□□□ 1.14
FAM49B-214ENST00000519540 NOL8Q76FK4 1167 aaKnown RBP22.17■■□□□ 1.14
FAM49B-214ENST00000519540 JAKMIP1Q96N16 626 aaKnown RBP22.17■■□□□ 1.14
FAM49B-214ENST00000519540 RNF113AO15541 343 aaKnown RBP22.16■■□□□ 1.14
FAM49B-214ENST00000519540 ERFEQ4G0M1 354 aa22.16■■□□□ 1.14
FAM49B-214ENST00000519540 ZMYM1Q5SVZ6 1142 aa22.16■■□□□ 1.14
FAM49B-214ENST00000519540 TBC1D9BQ66K14 1250 aa22.16■■□□□ 1.14
FAM49B-214ENST00000519540 CCDC129Q6ZRS4 1044 aa22.16■■□□□ 1.14
FAM49B-214ENST00000519540 ZNF512BQ96KM6 892 aaPredicted RBP22.16■■□□□ 1.14
FAM49B-214ENST00000519540 MPHOSPH8Q99549 860 aa22.16■■□□□ 1.14
FAM49B-214ENST00000519540 BCL11BQ9C0K0 894 aaPredicted RBP22.16■■□□□ 1.14
FAM49B-214ENST00000519540 RTCBQ9Y3I0 505 aaKnown RBP22.16■■□□□ 1.14
FAM49B-214ENST00000519540 FGFR2P21802 821 aa22.16■■□□□ 1.14
FAM49B-214ENST00000519540 SSFA2P28290 1259 aa22.16■■□□□ 1.14
FAM49B-214ENST00000519540 CPA1P15085 419 aa22.15■■□□□ 1.14
FAM49B-214ENST00000519540 PUM3Q15397 648 aaKnown RBP22.15■■□□□ 1.14
FAM49B-214ENST00000519540 SLFNL1Q499Z3 407 aa22.15■■□□□ 1.14
FAM49B-214ENST00000519540 BICDL1Q6ZP65 573 aa22.15■■□□□ 1.14
FAM49B-214ENST00000519540 HELBQ8NG08 1087 aaPredicted RBP22.15■■□□□ 1.14
FAM49B-214ENST00000519540 INTS4Q96HW7 963 aaKnown RBP22.15■■□□□ 1.14
FAM49B-214ENST00000519540 SRP68Q9UHB9 627 aaKnown RBP22.15■■□□□ 1.14
FAM49B-214ENST00000519540 ZPR1O75312 459 aa22.14■■□□□ 1.14
FAM49B-214ENST00000519540 ZAP70P43403 619 aa22.14■■□□□ 1.14
FAM49B-214ENST00000519540 AK2P54819 239 aa22.14■■□□□ 1.14
FAM49B-214ENST00000519540 NUCB2P80303 420 aa22.14■■□□□ 1.14
FAM49B-214ENST00000519540 TSGA10IPQ3SY00 556 aa22.14■■□□□ 1.14
FAM49B-214ENST00000519540 LPIN2Q92539 896 aa22.14■■□□□ 1.14
FAM49B-214ENST00000519540 HMG20BQ9P0W2 317 aa22.14■■□□□ 1.14
FAM49B-214ENST00000519540 CYP46A1Q9Y6A2 500 aa22.14■■□□□ 1.14
FAM49B-214ENST00000519540 IGHMBP2P38935 993 aaKnown RBP22.14■■□□□ 1.13
FAM49B-214ENST00000519540 VPS53Q5VIR6 699 aa22.14■■□□□ 1.13
FAM49B-214ENST00000519540 RUFY3Q7L099 469 aa22.14■■□□□ 1.13
FAM49B-214ENST00000519540 AMIGO3Q86WK7 504 aa22.14■■□□□ 1.13
FAM49B-214ENST00000519540 RPAP1Q9BWH6 1393 aaPredicted RBP22.13■■□□□ 1.13
FAM49B-214ENST00000519540 LRRFIP1Q32MZ4 808 aaKnown RBP22.13■■□□□ 1.13
FAM49B-214ENST00000519540 SLC10A5Q5PT55 438 aa22.13■■□□□ 1.13
FAM49B-214ENST00000519540 ARHGEF1Q92888 912 aaKnown RBP22.13■■□□□ 1.13
FAM49B-214ENST00000519540 U3KPZ7 1027 aaPredicted RBP22.13■■□□□ 1.13
FAM49B-214ENST00000519540 MCAMP43121 646 aa22.13■■□□□ 1.13
FAM49B-214ENST00000519540 SF3B3Q15393 1217 aaKnown RBP22.13■■□□□ 1.13
FAM49B-214ENST00000519540 PDRG1Q9NUG6 133 aa22.13■■□□□ 1.13
FAM49B-214ENST00000519540 AKAP11Q9UKA4 1901 aa22.12■■□□□ 1.13
FAM49B-214ENST00000519540 CYP2E1P05181 493 aaPredicted RBP22.12■■□□□ 1.13
FAM49B-214ENST00000519540 PSMA5P28066 241 aa22.12■■□□□ 1.13
FAM49B-214ENST00000519540 CCDC102BQ68D86 513 aa22.12■■□□□ 1.13
FAM49B-214ENST00000519540 PI16Q6UXB8 463 aa22.12■■□□□ 1.13
FAM49B-214ENST00000519540 SETDB2Q96T68 719 aa22.12■■□□□ 1.13
FAM49B-214ENST00000519540 LIMCH1Q9UPQ0 1083 aa22.12■■□□□ 1.13
FAM49B-214ENST00000519540 C4BP0C0L5 1744 aa22.11■■□□□ 1.13
FAM49B-214ENST00000519540 ZFYP08048 801 aaPredicted RBP22.11■■□□□ 1.13
FAM49B-214ENST00000519540 C3orf67Q6ZVT6 689 aa22.11■■□□□ 1.13
FAM49B-214ENST00000519540 GBP4Q96PP9 640 aa22.11■■□□□ 1.13
FAM49B-214ENST00000519540 TAF6LQ9Y6J9 622 aa22.11■■□□□ 1.13
FAM49B-214ENST00000519540 NYXQ9GZU5 481 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms