RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 WASHC4Q2M389 1173 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 LMBR1LQ6UX01 489 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 GPC2Q8N158 579 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-219ENST00000518824 CDC5LQ99459 802 aaKnown RBP16.86■□□□□ 0.29
VEGFA-219ENST00000518824 TAF1DQ9H5J8 278 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-219ENST00000518824 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 ANKIB1Q9P2G1 1089 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 ZNRF3Q9ULT6 936 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 SCN9AQ15858 1988 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 BCAR3O75815 825 aa16.85■□□□□ 0.29
VEGFA-219ENST00000518824 SCNN1DP51172 638 aa16.85■□□□□ 0.29
VEGFA-219ENST00000518824 VPS33BQ9H267 617 aa16.85■□□□□ 0.29
VEGFA-219ENST00000518824 BSDC1Q9NW68 430 aaPredicted RBP16.85■□□□□ 0.29
VEGFA-219ENST00000518824 CHMP3Q9Y3E7 222 aa16.85■□□□□ 0.29
VEGFA-219ENST00000518824 UTYO14607 1347 aa16.85■□□□□ 0.29
VEGFA-219ENST00000518824 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
VEGFA-219ENST00000518824 SHTN1A0MZ66 631 aa16.84■□□□□ 0.29
VEGFA-219ENST00000518824 SNAP23O00161 211 aa16.84■□□□□ 0.29
VEGFA-219ENST00000518824 HSPA6P17066 643 aa16.84■□□□□ 0.29
VEGFA-219ENST00000518824 EPS15P42566 896 aa16.84■□□□□ 0.29
VEGFA-219ENST00000518824 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-219ENST00000518824 HTRA3P83110 453 aa16.84■□□□□ 0.29
VEGFA-219ENST00000518824 USP44Q9H0E7 712 aa16.84■□□□□ 0.29
VEGFA-219ENST00000518824 GGA1Q9UJY5 639 aa16.84■□□□□ 0.29
VEGFA-219ENST00000518824 KLRK1P26718 216 aa16.83■□□□□ 0.28
VEGFA-219ENST00000518824 EPHX2P34913 555 aa16.83■□□□□ 0.28
VEGFA-219ENST00000518824 XDHP47989 1333 aa16.83■□□□□ 0.28
VEGFA-219ENST00000518824 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.28
VEGFA-219ENST00000518824 HACL1Q9UJ83 578 aa16.83■□□□□ 0.28
VEGFA-219ENST00000518824 ZBED9Q6R2W3 1325 aa16.82■□□□□ 0.28
VEGFA-219ENST00000518824 ANKRD18BA2A2Z9 1011 aa16.82■□□□□ 0.28
VEGFA-219ENST00000518824 ECE2O60344 883 aa16.82■□□□□ 0.28
VEGFA-219ENST00000518824 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
VEGFA-219ENST00000518824 EAPPQ56P03 285 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-219ENST00000518824 CIAPIN1Q6FI81 312 aa16.82■□□□□ 0.28
VEGFA-219ENST00000518824 TXNRD3Q86VQ6 643 aa16.82■□□□□ 0.28
VEGFA-219ENST00000518824 ANKRD44Q8N8A2 993 aa16.82■□□□□ 0.28
VEGFA-219ENST00000518824 HELBQ8NG08 1087 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-219ENST00000518824 BICC1Q9H694 974 aaKnown RBP16.82■□□□□ 0.28
VEGFA-219ENST00000518824 ZBTB12Q9Y330 459 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-219ENST00000518824 GMPSP49915 693 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-219ENST00000518824 FSTL1Q12841 308 aa16.81■□□□□ 0.28
VEGFA-219ENST00000518824 IFIT5Q13325 482 aaKnown RBP16.81■□□□□ 0.28
VEGFA-219ENST00000518824 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
VEGFA-219ENST00000518824 EYA3Q99504 573 aa16.81■□□□□ 0.28
VEGFA-219ENST00000518824 IQCA1LA6NCM1 817 aa16.8■□□□□ 0.28
VEGFA-219ENST00000518824 PSMD14O00487 310 aa16.8■□□□□ 0.28
VEGFA-219ENST00000518824 TAF5LO75529 589 aa16.8■□□□□ 0.28
VEGFA-219ENST00000518824 ATP2B4P23634 1241 aa16.8■□□□□ 0.28
VEGFA-219ENST00000518824 CCT4P50991 539 aaKnown RBP16.8■□□□□ 0.28
VEGFA-219ENST00000518824 CHRNDQ07001 517 aa16.8■□□□□ 0.28
VEGFA-219ENST00000518824 MPHOSPH8Q99549 860 aa16.8■□□□□ 0.28
VEGFA-219ENST00000518824 PUS3Q9BZE2 481 aaKnown RBP16.8■□□□□ 0.28
VEGFA-219ENST00000518824 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
VEGFA-219ENST00000518824 RABL6Q3YEC7 729 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-219ENST00000518824 GPRC5DQ9NZD1 345 aa16.79■□□□□ 0.28
VEGFA-219ENST00000518824 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-219ENST00000518824 CHADLQ6NUI6 762 aa16.78■□□□□ 0.28
VEGFA-219ENST00000518824 KLHDC4Q8TBB5 520 aa16.78■□□□□ 0.28
VEGFA-219ENST00000518824 API5Q9BZZ5 524 aaKnown RBP16.78■□□□□ 0.28
VEGFA-219ENST00000518824 IRS2Q9Y4H2 1338 aa16.77■□□□□ 0.28
VEGFA-219ENST00000518824 TRIM27P14373 513 aa16.77■□□□□ 0.28
VEGFA-219ENST00000518824 CCDC57Q2TAC2 916 aa16.77■□□□□ 0.28
VEGFA-219ENST00000518824 LDHDQ86WU2 507 aa16.77■□□□□ 0.28
VEGFA-219ENST00000518824 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-219ENST00000518824 MEIS3Q99687 375 aa16.77■□□□□ 0.28
VEGFA-219ENST00000518824 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
VEGFA-219ENST00000518824 PSME4Q14997 1843 aa16.77■□□□□ 0.27
VEGFA-219ENST00000518824 ZNF804BA4D1E1 1349 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 KIF16BQ96L93 1317 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 PLIN1O60240 522 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-219ENST00000518824 FMR1Q06787 632 aaKnown RBP eCLIP16.76■□□□□ 0.27
VEGFA-219ENST00000518824 TNIP1Q15025 636 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 MAP1SQ66K74 1059 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-219ENST00000518824 LDHAL6AQ6ZMR3 332 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 TRPM4Q8TD43 1214 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 CLUAP1Q96AJ1 413 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 MXD3Q9BW11 206 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 LEMD3Q9Y2U8 911 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
VEGFA-219ENST00000518824 ITGBL1O95965 494 aaPredicted RBP16.75■□□□□ 0.27
VEGFA-219ENST00000518824 EGFRP00533 1210 aa16.75■□□□□ 0.27
VEGFA-219ENST00000518824 HIRAP54198 1017 aaPredicted RBP16.75■□□□□ 0.27
VEGFA-219ENST00000518824 LRRC24Q50LG9 513 aa16.75■□□□□ 0.27
VEGFA-219ENST00000518824 TAF7LQ5H9L4 462 aa16.75■□□□□ 0.27
VEGFA-219ENST00000518824 ARHGAP45Q92619 1136 aa16.75■□□□□ 0.27
VEGFA-219ENST00000518824 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
VEGFA-219ENST00000518824 CNNM1Q9NRU3 951 aa16.75■□□□□ 0.27
VEGFA-219ENST00000518824 CNOT7Q9UIV1 285 aaKnown RBP16.75■□□□□ 0.27
VEGFA-219ENST00000518824 G3V3G9 751 aa16.74■□□□□ 0.27
VEGFA-219ENST00000518824 VIL1P09327 827 aaKnown RBP16.74■□□□□ 0.27
VEGFA-219ENST00000518824 RFX5P48382 616 aaPredicted RBP16.74■□□□□ 0.27
VEGFA-219ENST00000518824 APLP1P51693 650 aa16.74■□□□□ 0.27
VEGFA-219ENST00000518824 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
VEGFA-219ENST00000518824 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
VEGFA-219ENST00000518824 ATF7IPQ6VMQ6 1270 aa16.74■□□□□ 0.27
VEGFA-219ENST00000518824 MICALL2Q8IY33 904 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms