RNA–Protein interactions for RNA: ENST00000518506.4

TVP23C-CDRT4-202, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 5

Gene TVP23C-CDRT4, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-202ENST00000518506 SMG9Q9H0W8 520 aaKnown RBP3.22□□□□□ -1.89
TVP23C-CDRT4-202ENST00000518506 TLR7Q9NYK1 1049 aaKnown RBP3.22□□□□□ -1.89
TVP23C-CDRT4-202ENST00000518506 SALL4Q9UJQ4 1053 aa3.22□□□□□ -1.89
TVP23C-CDRT4-202ENST00000518506 SLC6A14Q9UN76 642 aa3.22□□□□□ -1.89
TVP23C-CDRT4-202ENST00000518506 LOC102724428A0A0B4J2F2 783 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 A0A1W2PP55 124 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 EGFRP00533 1210 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 EPB42P16452 691 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 HOXB4P17483 251 aaPredicted RBP3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 AMPD1P23109 780 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 SIK1P57059 783 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 FMR1Q06787 632 aaKnown RBP eCLIP3.21□□□□□ -1.92e-6■■■■□ 22.7
TVP23C-CDRT4-202ENST00000518506 LBRQ14739 615 aaKnown RBP3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 HIF1AQ16665 826 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 C9orf131Q5VYM1 1079 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 NXPE4Q6UWF7 544 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 SVOPQ8N4V2 548 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 TTC16Q8NEE8 873 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 OR13H1Q8NG92 308 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ASAP3Q8TDY4 903 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 EDARADDQ8WWZ3 215 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CCDC74AQ96AQ1 378 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 POP1Q99575 1024 aaKnown RBP3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 LPIN3Q9BQK8 851 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 SUV39H2Q9H5I1 410 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 RRAGCQ9HB90 399 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 PARP2Q9UGN5 583 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 PHF24Q9UPV7 400 aa3.21□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CNTNAP5Q8WYK1 1306 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 PHF20L1A8MW92 1017 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 M0R082 166 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 NFKBIEO00221 500 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GADD45BO75293 160 aaPredicted RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 PSAPP07602 524 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 EPXP11678 715 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 PCSK2P16519 638 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ZNF16P17020 682 aaPredicted RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GRIA4P48058 902 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 FCGRTP55899 365 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 SRSF11Q05519 484 aaKnown RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ENOX2Q16206 610 aaKnown RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CEP135Q66GS9 1140 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CHSY3Q70JA7 882 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CEP120Q8N960 986 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GLIS3Q8NEA6 775 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ZNF417Q8TAU3 575 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 SNX29Q8TEQ0 813 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 PLD4Q96BZ4 506 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 BTBD6Q96KE9 485 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ZNF587Q96SQ5 575 aaPredicted RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 OSMRQ99650 979 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 MDFIQ99750 246 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 TRIM56Q9BRZ2 755 aaKnown RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CARD10Q9BWT7 1032 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 MUC3BQ9H195 1237 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 JPH1Q9HDC5 661 aaPredicted RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 KIAA1522Q9P206 1035 aaPredicted RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 FNDC3AQ9Y2H6 1198 aaKnown RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 AMOTL2Q9Y2J4 779 aa3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GPC6Q9Y625 555 aaPredicted RBP3.2□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 DDX3YO15523 660 aaKnown RBP3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 OIP5O43482 229 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CPNE3O75131 537 aaKnown RBP3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ECEL1O95672 775 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CTSHP09668 335 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 BCRP11274 1271 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 EPHA1P21709 976 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ADH6P28332 368 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 COL9A3Q14050 684 aaPredicted RBP3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GRM2Q14416 872 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GRIK5Q16478 980 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 EAPPQ56P03 285 aaPredicted RBP3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 FAM182BQ5T319 152 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 MEI1Q5TIA1 1274 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 PDE12Q6L8Q7 609 aaKnown RBP3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ELMSAN1Q6PJG2 1045 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 XKR5Q6UX68 686 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 MPRIPQ6WCQ1 1025 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ZSCAN29Q8IWY8 852 aaPredicted RBP3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 DMRTC2Q8IXT2 367 aaPredicted RBP3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 NEDD1Q8NHV4 660 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GMCL1Q96IK5 515 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 TCF12Q99081 682 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 BCO2Q9BYV7 579 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 EHD4Q9H223 541 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 DZANK1Q9NVP4 752 aa3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 CCDC9Q9Y3X0 531 aaKnown RBP3.19□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ELOA3CA0A087WX78 387 aaPredicted RBP3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ELOA3DA6NLF2 546 aaPredicted RBP3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 PATL2C9JE40 543 aaKnown RBP3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 LINC01387J3KSC0 135 aa3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 DLL1O00548 723 aa3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 SIN3BO75182 1162 aa3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GHRHP01286 108 aa3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 SLURP2P0DP57 97 aa3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 ARAFP10398 606 aa3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 BAG6P46379 1132 aa3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 AFF1P51825 1210 aaKnown RBP3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 GPLD1P80108 840 aa3.18□□□□□ -1.9
TVP23C-CDRT4-202ENST00000518506 FAAP100Q0VG06 881 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms