RNA–Protein interactions for RNA: ENST00000516201.1

SCARNA5-201, small Cajal body-specific RNA 5, humanhuman

BASIC

Gene SCARNA5, Length 276 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA5-201ENST00000516201 LRRC24Q50LG9 513 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 PRPF40BQ6NWY9 871 aaKnown RBP8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 MROH5Q6ZUA9 1318 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 CENPQQ7L2Z9 268 aaPredicted RBP8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 ERC1Q8IUD2 1116 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 SP8Q8IXZ3 490 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 TTLL6Q8N841 843 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 NLGN2Q8NFZ4 835 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 KLHDC4Q8TBB5 520 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 ZNF594Q96JF6 807 aaPredicted RBP8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 CCDC85AQ96PX6 553 aaPredicted RBP8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 SYT17Q9BSW7 474 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 PUS3Q9BZE2 481 aaKnown RBP8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 FHDC1Q9C0D6 1143 aaPredicted RBP8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 AKAP11Q9UKA4 1901 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 MINPP1Q9UNW1 487 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 CHMP3Q9Y3E7 222 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 ATP6V0A2Q9Y487 856 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 IRS2Q9Y4H2 1338 aa8.16□□□□□ -1.1
SCARNA5-201ENST00000516201 ZNF646O15015 1829 aaPredicted RBP8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 A0A0G2JLW4 131 aa8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 PPEF1O14829 653 aaPredicted RBP8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 SURF6O75683 361 aaKnown RBP8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 SASH1O94885 1247 aa8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 FGFR2P21802 821 aa8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 LDHAL6AQ6ZMR3 332 aa8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 C15orf52Q6ZUT6 534 aaKnown RBP8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 KIF1BPQ96EK5 621 aa8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 MPHOSPH8Q99549 860 aa8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 RTFDC1Q9BY42 306 aaPredicted RBP8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 PIM2Q9P1W9 311 aa8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 EXOC6BQ9Y2D4 811 aa8.15□□□□□ -1.1
SCARNA5-201ENST00000516201 MYH13Q9UKX3 1938 aa8.15□□□□□ -1.11
SCARNA5-201ENST00000516201 CCDC88AQ3V6T2 1871 aa8.15□□□□□ -1.11
SCARNA5-201ENST00000516201 XDHP47989 1333 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 SALL3Q9BXA9 1300 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 LTBP3Q9NS15 1303 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 GOLGB1Q14789 3259 aaKnown RBP8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 PDE8BO95263 885 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 NUCB1Q02818 461 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 CHRNDQ07001 517 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 G3BP1Q13283 466 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 DALRD3Q5D0E6 543 aaKnown RBP8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 TAF7LQ5H9L4 462 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 SOGA3Q5TF21 947 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 RHPN1Q8TCX5 695 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 ZNF622Q969S3 477 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 ANKRD2Q9GZV1 360 aa8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.14□□□□□ -1.11
SCARNA5-201ENST00000516201 SCN9AQ15858 1988 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 UBE4AQ14139 1066 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 PUM3Q15397 648 aaKnown RBP8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 PSMD1Q99460 953 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 LRRCC1Q9C099 1032 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 SIL1Q9H173 461 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 CNNM1Q9NRU3 951 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 LEMD3Q9Y2U8 911 aa8.13□□□□□ -1.11
SCARNA5-201ENST00000516201 MED23Q9ULK4 1368 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 ZNF804BA4D1E1 1349 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 ATP2B4P23634 1241 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 GPSM2P81274 684 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 TFCP2Q12800 502 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 CCDC93Q567U6 631 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 TNNI3KQ59H18 835 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 METTL24Q5JXM2 366 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 RTKN2Q8IZC4 609 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 LPIN2Q92539 896 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 CCDC136Q96JN2 1154 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 VPS33BQ9H267 617 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 PPP1R1BQ9UD71 204 aaPredicted RBP8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 FPGT-TNNI3KV9GXZ4 949 aa8.12□□□□□ -1.11
SCARNA5-201ENST00000516201 AOX1Q06278 1338 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 NFKBIEO00221 500 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 ATP2B3Q16720 1220 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 B4GALNT3Q6L9W6 998 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 OLFM4Q6UX06 510 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 CHD1LQ86WJ1 897 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 CLASRPQ8N2M8 674 aaKnown RBP8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 TBC1D16Q8TBP0 767 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 EAF2Q96CJ1 260 aaPredicted RBP8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 ZNF512BQ96KM6 892 aaPredicted RBP8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 STAP2Q9UGK3 403 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 POLLQ9UGP5 575 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 DBNLQ9UJU6 430 aaKnown RBP8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 UTRNP46939 3433 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 MYH7P12883 1935 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 COL4A5P29400 1685 aa8.11□□□□□ -1.11
SCARNA5-201ENST00000516201 DOCK2Q92608 1830 aa8.1□□□□□ -1.11
SCARNA5-201ENST00000516201 PDS5AQ29RF7 1337 aaKnown RBP8.1□□□□□ -1.11
SCARNA5-201ENST00000516201 A0A1B0GUL7 405 aa8.1□□□□□ -1.11
SCARNA5-201ENST00000516201 C21orf2O43822 256 aa8.1□□□□□ -1.11
SCARNA5-201ENST00000516201 SLC5A1P13866 664 aa8.1□□□□□ -1.11
SCARNA5-201ENST00000516201 FKBP4Q02790 459 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCARNA5-201ENST00000516201 KIAA2012Q0VF49 1180 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms