RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 SPEF2Q9C093 1822 aa16.61■□□□□ 0.25
CDK7-213ENST00000515391 WTIPA6NIX2 430 aaPredicted RBP16.61■□□□□ 0.25
CDK7-213ENST00000515391 FAM161AQ3B820 660 aa16.61■□□□□ 0.25
CDK7-213ENST00000515391 CIAPIN1Q6FI81 312 aa16.61■□□□□ 0.25
CDK7-213ENST00000515391 SSH1Q8WYL5 1049 aa16.61■□□□□ 0.25
CDK7-213ENST00000515391 CDC5LQ99459 802 aaKnown RBP16.61■□□□□ 0.25
CDK7-213ENST00000515391 PLA2G12BQ9BX93 195 aa16.61■□□□□ 0.25
CDK7-213ENST00000515391 ANKIB1Q9P2G1 1089 aa16.61■□□□□ 0.25
CDK7-213ENST00000515391 UFL1O94874 794 aa16.6■□□□□ 0.25
CDK7-213ENST00000515391 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
CDK7-213ENST00000515391 LDHDQ86WU2 507 aa16.6■□□□□ 0.25
CDK7-213ENST00000515391 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
CDK7-213ENST00000515391 DNAJC5GQ8N7S2 189 aa16.6■□□□□ 0.25
CDK7-213ENST00000515391 KCNQ5Q9NR82 932 aa16.6■□□□□ 0.25
CDK7-213ENST00000515391 PODXL2Q9NZ53 605 aa16.6■□□□□ 0.25
CDK7-213ENST00000515391 CSF1RP07333 972 aa16.59■□□□□ 0.25
CDK7-213ENST00000515391 ITGA6P23229 1130 aa16.59■□□□□ 0.25
CDK7-213ENST00000515391 GMPSP49915 693 aaPredicted RBP16.59■□□□□ 0.25
CDK7-213ENST00000515391 FOXO4P98177 505 aa16.59■□□□□ 0.25
CDK7-213ENST00000515391 EPHA10Q5JZY3 1008 aa16.59■□□□□ 0.25
CDK7-213ENST00000515391 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
CDK7-213ENST00000515391 GGA1Q9UJY5 639 aa16.59■□□□□ 0.25
CDK7-213ENST00000515391 SHTN1A0MZ66 631 aa16.58■□□□□ 0.24
CDK7-213ENST00000515391 ECE2O60344 883 aa16.58■□□□□ 0.24
CDK7-213ENST00000515391 MAP1SQ66K74 1059 aaPredicted RBP16.58■□□□□ 0.24
CDK7-213ENST00000515391 EYA3Q99504 573 aa16.58■□□□□ 0.24
CDK7-213ENST00000515391 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.24
CDK7-213ENST00000515391 MINPP1Q9UNW1 487 aa16.58■□□□□ 0.24
CDK7-213ENST00000515391 RTL9Q8NET4 1388 aa16.58■□□□□ 0.24
CDK7-213ENST00000515391 ADAMTSL1Q8N6G6 1762 aa16.57■□□□□ 0.24
CDK7-213ENST00000515391 XDHP47989 1333 aa16.57■□□□□ 0.24
CDK7-213ENST00000515391 GRM8O00222 908 aa16.57■□□□□ 0.24
CDK7-213ENST00000515391 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
CDK7-213ENST00000515391 SRCIN1Q9C0H9 1055 aa16.57■□□□□ 0.24
CDK7-213ENST00000515391 BSDC1Q9NW68 430 aaPredicted RBP16.57■□□□□ 0.24
CDK7-213ENST00000515391 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
CDK7-213ENST00000515391 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
CDK7-213ENST00000515391 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
CDK7-213ENST00000515391 CHMP3Q9Y3E7 222 aa16.57■□□□□ 0.24
CDK7-213ENST00000515391 PSMD14O00487 310 aa16.56■□□□□ 0.24
CDK7-213ENST00000515391 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
CDK7-213ENST00000515391 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
CDK7-213ENST00000515391 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
CDK7-213ENST00000515391 TNIP1Q15025 636 aa16.56■□□□□ 0.24
CDK7-213ENST00000515391 G3V3G9 751 aa16.55■□□□□ 0.24
CDK7-213ENST00000515391 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
CDK7-213ENST00000515391 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
CDK7-213ENST00000515391 LMBR1LQ6UX01 489 aa16.55■□□□□ 0.24
CDK7-213ENST00000515391 CNTROBQ8N137 903 aa16.55■□□□□ 0.24
CDK7-213ENST00000515391 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
CDK7-213ENST00000515391 SCN9AQ15858 1988 aa16.55■□□□□ 0.24
CDK7-213ENST00000515391 PASKQ96RG2 1323 aa16.54■□□□□ 0.24
CDK7-213ENST00000515391 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
CDK7-213ENST00000515391 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
CDK7-213ENST00000515391 CCT4P50991 539 aaKnown RBP16.54■□□□□ 0.24
CDK7-213ENST00000515391 FMR1Q06787 632 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDK7-213ENST00000515391 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
CDK7-213ENST00000515391 SUCLG2Q96I99 432 aa16.54■□□□□ 0.24
CDK7-213ENST00000515391 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
CDK7-213ENST00000515391 MPHOSPH8Q99549 860 aa16.54■□□□□ 0.24
CDK7-213ENST00000515391 CNOT7Q9UIV1 285 aaKnown RBP16.54■□□□□ 0.24
CDK7-213ENST00000515391 PTPRCP08575 1304 aa16.53■□□□□ 0.24
CDK7-213ENST00000515391 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
CDK7-213ENST00000515391 USP50Q70EL3 339 aaPredicted RBP16.53■□□□□ 0.24
CDK7-213ENST00000515391 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
CDK7-213ENST00000515391 TRPM4Q8TD43 1214 aa16.53■□□□□ 0.24
CDK7-213ENST00000515391 KAZALD1Q96I82 304 aa16.53■□□□□ 0.24
CDK7-213ENST00000515391 ADARB2Q9NS39 739 aaKnown RBP16.53■□□□□ 0.24
CDK7-213ENST00000515391 SNAP23O00161 211 aa16.52■□□□□ 0.24
CDK7-213ENST00000515391 HIRAP54198 1017 aaPredicted RBP16.52■□□□□ 0.24
CDK7-213ENST00000515391 IFIT5Q13325 482 aaKnown RBP16.52■□□□□ 0.24
CDK7-213ENST00000515391 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
CDK7-213ENST00000515391 MICALL2Q8IY33 904 aa16.52■□□□□ 0.24
CDK7-213ENST00000515391 TAF5LO75529 589 aa16.51■□□□□ 0.23
CDK7-213ENST00000515391 KLRK1P26718 216 aa16.51■□□□□ 0.23
CDK7-213ENST00000515391 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDK7-213ENST00000515391 CHRNDQ07001 517 aa16.51■□□□□ 0.23
CDK7-213ENST00000515391 SAMD7Q7Z3H4 446 aa16.51■□□□□ 0.23
CDK7-213ENST00000515391 NOB1Q9ULX3 412 aaKnown RBP16.51■□□□□ 0.23
CDK7-213ENST00000515391 H7C1D1 291 aa16.5■□□□□ 0.23
CDK7-213ENST00000515391 RBM26Q5T8P6 1007 aaKnown RBP16.5■□□□□ 0.23
CDK7-213ENST00000515391 LEMD3Q9Y2U8 911 aa16.5■□□□□ 0.23
CDK7-213ENST00000515391 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
CDK7-213ENST00000515391 ZNF804BA4D1E1 1349 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 UTYO14607 1347 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 TRAF5O00463 557 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 EGFRP00533 1210 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
CDK7-213ENST00000515391 CCDC57Q2TAC2 916 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 TBC1D10BQ4KMP7 808 aaPredicted RBP16.49■□□□□ 0.23
CDK7-213ENST00000515391 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 DPF2Q92785 391 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 ANKRD2Q9GZV1 360 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
CDK7-213ENST00000515391 CREBZFQ9NS37 354 aa16.49■□□□□ 0.23
CDK7-213ENST00000515391 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
CDK7-213ENST00000515391 PLIN1O60240 522 aa16.48■□□□□ 0.23
CDK7-213ENST00000515391 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
CDK7-213ENST00000515391 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
CDK7-213ENST00000515391 MXD3Q9BW11 206 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms