RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 DDX60Q8IY21 1712 aaKnown RBP14.13□□□□□ -0.15
UBE2D3-232ENST00000514755 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
UBE2D3-232ENST00000514755 FLIIQ13045 1269 aa14.13□□□□□ -0.15
UBE2D3-232ENST00000514755 C9orf131Q5VYM1 1079 aa14.13□□□□□ -0.15
UBE2D3-232ENST00000514755 KSR2Q6VAB6 950 aa14.13□□□□□ -0.15
UBE2D3-232ENST00000514755 JARID2Q92833 1246 aaPredicted RBP14.13□□□□□ -0.15
UBE2D3-232ENST00000514755 SH3TC1Q8TE82 1336 aa14.13□□□□□ -0.15
UBE2D3-232ENST00000514755 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
UBE2D3-232ENST00000514755 E9PSI1 815 aa14.12□□□□□ -0.15
UBE2D3-232ENST00000514755 IGKV5-2P06315 115 aa14.12□□□□□ -0.15
UBE2D3-232ENST00000514755 TRIM28Q13263 835 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-232ENST00000514755 NLRP3Q96P20 1036 aa14.12□□□□□ -0.15
UBE2D3-232ENST00000514755 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
UBE2D3-232ENST00000514755 RNF123Q5XPI4 1314 aa14.12□□□□□ -0.15
UBE2D3-232ENST00000514755 DDX58O95786 925 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 HOXA10P31260 410 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 MAP3K9P80192 1104 aa14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 CWF19L2Q2TBE0 894 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 CCDC88AQ3V6T2 1871 aa14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 ZNF526Q8TF50 670 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 RPGRQ92834 1020 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 RNF181Q9P0P0 153 aa14.11□□□□□ -0.15
UBE2D3-232ENST00000514755 COL4A1P02462 1669 aa14.1□□□□□ -0.15
UBE2D3-232ENST00000514755 TAF1P21675 1872 aa14.1□□□□□ -0.15
UBE2D3-232ENST00000514755 ALDH1B1P30837 517 aa14.1□□□□□ -0.15
UBE2D3-232ENST00000514755 FKBP5Q13451 457 aaPredicted RBP14.1□□□□□ -0.15
UBE2D3-232ENST00000514755 TRMT2AQ8IZ69 625 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-232ENST00000514755 ABCC4O15439 1325 aa14.1□□□□□ -0.15
UBE2D3-232ENST00000514755 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 SNED1Q8TER0 1413 aa14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 TESPA1A2RU30 521 aaPredicted RBP14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 F6X3S4 739 aa14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 SEMA3EO15041 775 aa14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 TBC1D12O60347 775 aa14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 ZBTB38Q8NAP3 1195 aaPredicted RBP14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 CCDC191Q8NCU4 936 aa14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
UBE2D3-232ENST00000514755 NEURL1BA8MQ27 555 aa14.08□□□□□ -0.16
UBE2D3-232ENST00000514755 IRS4O14654 1257 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-232ENST00000514755 LMNB1P20700 586 aa14.08□□□□□ -0.16
UBE2D3-232ENST00000514755 CCDC93Q567U6 631 aa14.08□□□□□ -0.16
UBE2D3-232ENST00000514755 CRAMP1Q96RY5 1269 aa14.08□□□□□ -0.16
UBE2D3-232ENST00000514755 CWC25Q9NXE8 425 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-232ENST00000514755 PCDHGA4Q9Y5G9 962 aa14.08□□□□□ -0.16
UBE2D3-232ENST00000514755 PCCAP05165 728 aaPredicted RBP14.07□□□□□ -0.16
UBE2D3-232ENST00000514755 MRPL50Q8N5N7 158 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-232ENST00000514755 DNAAF4Q8WXU2 420 aa14.07□□□□□ -0.16
UBE2D3-232ENST00000514755 BCL2L13Q9BXK5 485 aa14.07□□□□□ -0.16
UBE2D3-232ENST00000514755 TAOK3Q9H2K8 898 aa14.07□□□□□ -0.16
UBE2D3-232ENST00000514755 ZSWIM6Q9HCJ5 1215 aa14.07□□□□□ -0.16
UBE2D3-232ENST00000514755 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
UBE2D3-232ENST00000514755 SNPHO15079 494 aa14.06□□□□□ -0.16
UBE2D3-232ENST00000514755 HNRNPUQ00839 825 aaKnown RBP eCLIP14.06□□□□□ -0.16
UBE2D3-232ENST00000514755 SF3B3Q15393 1217 aaKnown RBP14.06□□□□□ -0.16
UBE2D3-232ENST00000514755 SSH1Q8WYL5 1049 aa14.06□□□□□ -0.16
UBE2D3-232ENST00000514755 LTBP3Q9NS15 1303 aa14.06□□□□□ -0.16
UBE2D3-232ENST00000514755 TIAM2Q8IVF5 1701 aa14.06□□□□□ -0.16
UBE2D3-232ENST00000514755 RIMBP2O15034 1052 aa14.05□□□□□ -0.16
UBE2D3-232ENST00000514755 NEXNQ0ZGT2 675 aa14.05□□□□□ -0.16
UBE2D3-232ENST00000514755 SOGA3Q5TF21 947 aa14.05□□□□□ -0.16
UBE2D3-232ENST00000514755 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-232ENST00000514755 CCDC85AQ96PX6 553 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-232ENST00000514755 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-232ENST00000514755 ZNF277Q9NRM2 450 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-232ENST00000514755 DICER1Q9UPY3 1922 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 H7C1W4 665 aa14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 FKBP4Q02790 459 aaKnown RBP eCLIP14.04□□□□□ -0.162e-9■■□□□ 12.2
UBE2D3-232ENST00000514755 GRAPQ13588 217 aa14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 GCKRQ14397 625 aa14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 BEND3Q5T5X7 828 aa14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 DDX46Q7L014 1031 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 GRAPLQ8TC17 118 aaPredicted RBP14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 SEC31BQ9NQW1 1179 aa14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 CDHR2Q9BYE9 1310 aa14.04□□□□□ -0.16
UBE2D3-232ENST00000514755 EVI5O60447 810 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 PDE8AO60658 829 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 CASP7P55210 303 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 UBE3BQ7Z3V4 1068 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 RTKN2Q8IZC4 609 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 LINS1Q8NG48 757 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 NMRK2Q9NPI5 230 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 ATP6V0A2Q9Y487 856 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 COL4A5P29400 1685 aa14.03□□□□□ -0.16
UBE2D3-232ENST00000514755 BBOX1O75936 387 aa14.01□□□□□ -0.17
UBE2D3-232ENST00000514755 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
UBE2D3-232ENST00000514755 SLC4A10Q6U841 1118 aa14.01□□□□□ -0.17
UBE2D3-232ENST00000514755 SP8Q8IXZ3 490 aa14.01□□□□□ -0.17
UBE2D3-232ENST00000514755 PSMD1Q99460 953 aa14.01□□□□□ -0.17
UBE2D3-232ENST00000514755 CTSWP56202 376 aa14□□□□□ -0.17
UBE2D3-232ENST00000514755 CC2D2BQ6DHV5 1058 aa14□□□□□ -0.17
UBE2D3-232ENST00000514755 GPR153Q6NV75 609 aa14□□□□□ -0.17
UBE2D3-232ENST00000514755 TTLL11Q8NHH1 800 aa14□□□□□ -0.17
UBE2D3-232ENST00000514755 LRRC37AA6NMS7 1700 aa14□□□□□ -0.17
UBE2D3-232ENST00000514755 DUOX1Q9NRD9 1551 aa14□□□□□ -0.17
UBE2D3-232ENST00000514755 MYH3P11055 1940 aa14□□□□□ -0.17
UBE2D3-232ENST00000514755 ZC3H4Q9UPT8 1303 aaKnown RBP13.99□□□□□ -0.17
UBE2D3-232ENST00000514755 GLTPD2A6NH11 291 aa13.99□□□□□ -0.17
UBE2D3-232ENST00000514755 ALDH1L2Q3SY69 923 aa13.99□□□□□ -0.17
UBE2D3-232ENST00000514755 ZNF710Q8N1W2 664 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms