RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 IGBP1P78318 339 aa8.49□□□□□ -1.05
NIPBL-208ENST00000514335 PKN1Q16512 942 aa8.49□□□□□ -1.05
NIPBL-208ENST00000514335 FAAH2Q6GMR7 532 aa8.49□□□□□ -1.05
NIPBL-208ENST00000514335 MTHFD1LQ6UB35 978 aa8.49□□□□□ -1.05
NIPBL-208ENST00000514335 LMNTD2Q8IXW0 634 aa8.49□□□□□ -1.05
NIPBL-208ENST00000514335 ANKRD20A12PQ8NF67 263 aa8.49□□□□□ -1.05
NIPBL-208ENST00000514335 KCNN1Q92952 543 aa8.49□□□□□ -1.05
NIPBL-208ENST00000514335 FAM81BQ96LP2 452 aa8.49□□□□□ -1.05
NIPBL-208ENST00000514335 A6NJR5 290 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 RPS6KA3P51812 740 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 FAM160A1Q05DH4 1040 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 TOMM20Q15388 145 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 SND1Q7KZF4 910 aaKnown RBP eCLIP8.48□□□□□ -1.05
NIPBL-208ENST00000514335 SUGP1Q8IWZ8 645 aaKnown RBP8.48□□□□□ -1.05
NIPBL-208ENST00000514335 TRIM52Q96A61 297 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 CENPTQ96BT3 561 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 MPP4Q96JB8 637 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 COMMD8Q9NX08 183 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 UBAP1Q9NZ09 502 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 AKAP2Q9Y2D5 859 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-208ENST00000514335 KNDC1Q76NI1 1749 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 CD53P19397 219 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 HOXD10P28358 340 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-208ENST00000514335 TERF2Q15554 542 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 SASS6Q6UVJ0 657 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 CCDC73Q6ZRK6 1079 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 RELL1Q8IUW5 271 aa8.48□□□□□ -1.05
NIPBL-208ENST00000514335 THEMISQ8N1K5 641 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-208ENST00000514335 JARID2Q92833 1246 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-208ENST00000514335 DDX27Q96GQ7 796 aaKnown RBP8.48□□□□□ -1.05
NIPBL-208ENST00000514335 PDGFDQ9GZP0 370 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-208ENST00000514335 PRSS47A8MTI9 375 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 AP1G2O75843 785 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 PYGLP06737 847 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 CYP11B2P19099 503 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 SLC4A3P48751 1232 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 HNRNPH2P55795 449 aaKnown RBP8.47□□□□□ -1.05
NIPBL-208ENST00000514335 DRC7Q8IY82 874 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 TMEM98Q9Y2Y6 226 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 RWDD2BP57060 319 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 CCDC93Q567U6 631 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 LLGL2Q6P1M3 1020 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 DRAXINQ8NBI3 349 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-208ENST00000514335 CEP89Q96ST8 783 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 HOXC10Q9NYD6 342 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 MORC2Q9Y6X9 1032 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-208ENST00000514335 PTCH1Q13635 1447 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 SETD5Q9C0A6 1442 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 ZSCAN9O15535 394 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-208ENST00000514335 SASH1O94885 1247 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 CSPG5O95196 566 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 MRE11P49959 708 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 SLC5A9Q2M3M2 681 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 GJC2Q5T442 439 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-208ENST00000514335 KCNB2Q92953 911 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 NACC2Q96BF6 587 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 ERP27Q96DN0 273 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 MPHOSPH6Q99547 160 aaKnown RBP8.47□□□□□ -1.05
NIPBL-208ENST00000514335 SPATA7Q9P0W8 599 aa8.47□□□□□ -1.05
NIPBL-208ENST00000514335 NEBLO76041 1014 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 U2AF2P26368 475 aaKnown RBP eCLIP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 MAGEA10P43363 369 aaPredicted RBP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 TBC1D8BQ0IIM8 1120 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 SIM2Q14190 667 aaPredicted RBP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 DHX8Q14562 1220 aaKnown RBP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 DDB1Q16531 1140 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 NOM1Q5C9Z4 860 aaKnown RBP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 C10orf67Q8IYJ2 551 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 NELL1Q92832 810 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 HPS3Q969F9 1004 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 CRACR2AQ9BSW2 395 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 CHST12Q9NRB3 414 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 TRIM66O15016 1216 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 BBOX1O75936 387 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 MSNP26038 577 aaKnown RBP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 TPP2P29144 1249 aaPredicted RBP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 GJA8P48165 433 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 SESN3P58005 492 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 PDAP1Q13442 181 aaKnown RBP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 SEPT2Q15019 361 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 COBLL1Q53SF7 1204 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 TSC1Q92574 1164 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 IRX2Q9BZI1 471 aaPredicted RBP8.46□□□□□ -1.06
NIPBL-208ENST00000514335 LNPKQ9C0E8 428 aa8.46□□□□□ -1.06
NIPBL-208ENST00000514335 NOLC1Q14978 699 aaKnown RBP eCLIP8.45□□□□□ -1.06
NIPBL-208ENST00000514335 RBM12BQ8IXT5 1001 aaKnown RBP8.45□□□□□ -1.06
NIPBL-208ENST00000514335 TBC1D5Q92609 795 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 TRIM6Q9C030 488 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-208ENST00000514335 PANK3Q9H999 370 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 CWC15Q9P013 229 aaKnown RBP8.45□□□□□ -1.06
NIPBL-208ENST00000514335 NWD2Q9ULI1 1742 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 KIF1AQ12756 1690 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 FKBP15Q5T1M5 1219 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 OTUD6AQ7L8S5 288 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 ARHGEF25Q86VW2 580 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 SLC39A3Q9BRY0 314 aa8.45□□□□□ -1.06
NIPBL-208ENST00000514335 DHX36Q9H2U1 1008 aaKnown RBP8.45□□□□□ -1.06
NIPBL-208ENST00000514335 OGFRQ9NZT2 677 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms