RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 C10orf71Q711Q0 1435 aa13.38□□□□□ -0.27
PFDN1-204ENST00000512707 MROH5Q6ZUA9 1318 aa13.38□□□□□ -0.27
PFDN1-204ENST00000512707 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
PFDN1-204ENST00000512707 ALDH1B1P30837 517 aa13.37□□□□□ -0.27
PFDN1-204ENST00000512707 RPS8P62241 208 aaKnown RBP13.37□□□□□ -0.27
PFDN1-204ENST00000512707 GRAPQ13588 217 aa13.37□□□□□ -0.27
PFDN1-204ENST00000512707 METTL24Q5JXM2 366 aa13.37□□□□□ -0.27
PFDN1-204ENST00000512707 C2CD5Q86YS7 1000 aa13.37□□□□□ -0.27
PFDN1-204ENST00000512707 GRAPLQ8TC17 118 aaPredicted RBP13.37□□□□□ -0.27
PFDN1-204ENST00000512707 ZNF594Q96JF6 807 aaPredicted RBP13.37□□□□□ -0.27
PFDN1-204ENST00000512707 CRAMP1Q96RY5 1269 aa13.37□□□□□ -0.27
PFDN1-204ENST00000512707 SEC31BQ9NQW1 1179 aa13.37□□□□□ -0.27
PFDN1-204ENST00000512707 AKAP2Q9Y2D5 859 aa13.37□□□□□ -0.27
PFDN1-204ENST00000512707 CAPN15O75808 1086 aa13.36□□□□□ -0.27
PFDN1-204ENST00000512707 BBOX1O75936 387 aa13.36□□□□□ -0.27
PFDN1-204ENST00000512707 SRGNP10124 158 aa13.36□□□□□ -0.27
PFDN1-204ENST00000512707 HOXA10P31260 410 aaPredicted RBP13.36□□□□□ -0.27
PFDN1-204ENST00000512707 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
PFDN1-204ENST00000512707 MASTLQ96GX5 879 aa13.36□□□□□ -0.27
PFDN1-204ENST00000512707 GPATCH3Q96I76 525 aa13.36□□□□□ -0.27
PFDN1-204ENST00000512707 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
PFDN1-204ENST00000512707 BCL11AQ9H165 835 aa13.36□□□□□ -0.27
PFDN1-204ENST00000512707 BSDC1Q9NW68 430 aaPredicted RBP13.36□□□□□ -0.27
PFDN1-204ENST00000512707 IFIT2P09913 472 aaKnown RBP13.35□□□□□ -0.27
PFDN1-204ENST00000512707 STYK1Q6J9G0 422 aa13.35□□□□□ -0.27
PFDN1-204ENST00000512707 CNKSR1Q969H4 720 aa13.35□□□□□ -0.27
PFDN1-204ENST00000512707 ANKRD2Q9GZV1 360 aa13.35□□□□□ -0.27
PFDN1-204ENST00000512707 GOLGB1Q14789 3259 aaKnown RBP13.34□□□□□ -0.27
PFDN1-204ENST00000512707 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
PFDN1-204ENST00000512707 TFCP2Q12800 502 aa13.34□□□□□ -0.27
PFDN1-204ENST00000512707 LRRC24Q50LG9 513 aa13.34□□□□□ -0.27
PFDN1-204ENST00000512707 ATG9AQ7Z3C6 839 aa13.34□□□□□ -0.27
PFDN1-204ENST00000512707 CELF1Q92879 486 aaKnown RBP13.34□□□□□ -0.27
PFDN1-204ENST00000512707 ZNF622Q969S3 477 aaKnown RBP eCLIP13.34□□□□□ -0.27
PFDN1-204ENST00000512707 PUS3Q9BZE2 481 aaKnown RBP13.34□□□□□ -0.27
PFDN1-204ENST00000512707 IL1RAPL2Q9NP60 686 aa13.34□□□□□ -0.27
PFDN1-204ENST00000512707 GPR108Q9NPR9 543 aa13.34□□□□□ -0.27
PFDN1-204ENST00000512707 RIPOR2Q9Y4F9 1068 aa13.34□□□□□ -0.27
PFDN1-204ENST00000512707 PPEF1O14829 653 aaPredicted RBP13.33□□□□□ -0.28
PFDN1-204ENST00000512707 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
PFDN1-204ENST00000512707 SASH1O94885 1247 aa13.33□□□□□ -0.28
PFDN1-204ENST00000512707 TGFB2P61812 414 aa13.33□□□□□ -0.28
PFDN1-204ENST00000512707 AACSQ86V21 672 aa13.33□□□□□ -0.28
PFDN1-204ENST00000512707 CD2APQ9Y5K6 639 aa13.33□□□□□ -0.28
PFDN1-204ENST00000512707 ANKRD31Q8N7Z5 1873 aa13.33□□□□□ -0.28
PFDN1-204ENST00000512707 PDE8BO95263 885 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 KCNJ4P48050 445 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 RGS3P49796 1198 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 PUM3Q15397 648 aaKnown RBP13.32□□□□□ -0.28
PFDN1-204ENST00000512707 GPR162Q16538 588 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 ATP2B3Q16720 1220 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 TNNI3KQ59H18 835 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 GORABQ5T7V8 394 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 FPGT-TNNI3KV9GXZ4 949 aa13.32□□□□□ -0.28
PFDN1-204ENST00000512707 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
PFDN1-204ENST00000512707 IFIT1P09914 478 aaKnown RBP13.31□□□□□ -0.28
PFDN1-204ENST00000512707 SLC5A1P13866 664 aa13.31□□□□□ -0.28
PFDN1-204ENST00000512707 CHRNDQ07001 517 aa13.31□□□□□ -0.28
PFDN1-204ENST00000512707 NEUROD6Q96NK8 337 aa13.31□□□□□ -0.28
PFDN1-204ENST00000512707 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
PFDN1-204ENST00000512707 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
PFDN1-204ENST00000512707 ERC2O15083 957 aa13.3□□□□□ -0.28
PFDN1-204ENST00000512707 MX1P20591 662 aa13.3□□□□□ -0.28
PFDN1-204ENST00000512707 CHRNA5P30532 468 aa13.3□□□□□ -0.28
PFDN1-204ENST00000512707 LPIN2Q92539 896 aa13.3□□□□□ -0.28
PFDN1-204ENST00000512707 XDHP47989 1333 aa13.3□□□□□ -0.28
PFDN1-204ENST00000512707 COL11A2P13942 1736 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-204ENST00000512707 ZNF609O15014 1411 aa13.3□□□□□ -0.28
PFDN1-204ENST00000512707 SPEF2Q9C093 1822 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 A0A1B0GUL7 405 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-204ENST00000512707 GRIPAP1Q4V328 841 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 CC2D2BQ6DHV5 1058 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 PRPF40BQ6NWY9 871 aaKnown RBP13.29□□□□□ -0.28
PFDN1-204ENST00000512707 SP8Q8IXZ3 490 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 HELBQ8NG08 1087 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-204ENST00000512707 ATP6V0A2Q9Y487 856 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 AOX1Q06278 1338 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
PFDN1-204ENST00000512707 DPEP1P16444 411 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 UBE4AQ14139 1066 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 CCDC158Q5M9N0 1113 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 SOGA3Q5TF21 947 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 VGLL2Q8N8G2 317 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 EAF2Q96CJ1 260 aaPredicted RBP13.28□□□□□ -0.28
PFDN1-204ENST00000512707 CCDC8Q9H0W5 538 aaPredicted RBP13.28□□□□□ -0.28
PFDN1-204ENST00000512707 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 PIM2Q9P1W9 311 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 LEMD3Q9Y2U8 911 aa13.28□□□□□ -0.28
PFDN1-204ENST00000512707 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 TAF5LO75529 589 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 ATP2B4P23634 1241 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 PDE4AP27815 886 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 CAVIN4Q5BKX8 364 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.29
PFDN1-204ENST00000512707 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms