RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 ZNF589Q86UQ0 364 aaPredicted RBP23.04■■□□□ 1.28
APBB3-219ENST00000511896 TICAM2Q86XR7 235 aa23.04■■□□□ 1.28
APBB3-219ENST00000511896 KCNB2Q92953 911 aa23.04■■□□□ 1.28
APBB3-219ENST00000511896 DDX60Q8IY21 1712 aaKnown RBP23.04■■□□□ 1.28
APBB3-219ENST00000511896 GNPATO15228 680 aa23.04■■□□□ 1.28
APBB3-219ENST00000511896 NARFQ9UHQ1 456 aa23.04■■□□□ 1.28
APBB3-219ENST00000511896 PDE8BO95263 885 aa23.03■■□□□ 1.28
APBB3-219ENST00000511896 CHGBP05060 677 aa23.03■■□□□ 1.28
APBB3-219ENST00000511896 CCDC152Q4G0S7 254 aa23.03■■□□□ 1.28
APBB3-219ENST00000511896 PRPF40BQ6NWY9 871 aaKnown RBP23.03■■□□□ 1.28
APBB3-219ENST00000511896 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
APBB3-219ENST00000511896 RBM8AQ9Y5S9 174 aaKnown RBP23.03■■□□□ 1.28
APBB3-219ENST00000511896 LY75O60449 1722 aa23.03■■□□□ 1.28
APBB3-219ENST00000511896 TTC39AQ5SRH9 613 aa23.03■■□□□ 1.28
APBB3-219ENST00000511896 BCL11BQ9C0K0 894 aaPredicted RBP23.03■■□□□ 1.28
APBB3-219ENST00000511896 LRP5O75197 1615 aa23.02■■□□□ 1.28
APBB3-219ENST00000511896 SEC31BQ9NQW1 1179 aa23.02■■□□□ 1.28
APBB3-219ENST00000511896 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 EP400Q96L91 3159 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 TAF5LO75529 589 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 USPL1Q5W0Q7 1092 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 TMX3Q96JJ7 454 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 RTCBQ9Y3I0 505 aaKnown RBP23.01■■□□□ 1.27
APBB3-219ENST00000511896 TBC1D9BQ66K14 1250 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 SPEF2Q9C093 1822 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 SCN7AQ01118 1682 aa23.01■■□□□ 1.27
APBB3-219ENST00000511896 MROH5Q6ZUA9 1318 aa23■■□□□ 1.27
APBB3-219ENST00000511896 LAMB2P55268 1798 aa23■■□□□ 1.27
APBB3-219ENST00000511896 KCNJ4P48050 445 aa23■■□□□ 1.27
APBB3-219ENST00000511896 MCMDC2Q4G0Z9 681 aa23■■□□□ 1.27
APBB3-219ENST00000511896 AMIGO3Q86WK7 504 aa23■■□□□ 1.27
APBB3-219ENST00000511896 SRP68Q9UHB9 627 aaKnown RBP23■■□□□ 1.27
APBB3-219ENST00000511896 ABCC12Q96J65 1359 aa23■■□□□ 1.27
APBB3-219ENST00000511896 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
APBB3-219ENST00000511896 CREB3L3Q68CJ9 461 aa22.99■■□□□ 1.27
APBB3-219ENST00000511896 BICDL1Q6ZP65 573 aa22.99■■□□□ 1.27
APBB3-219ENST00000511896 SEC62Q99442 399 aaKnown RBP22.99■■□□□ 1.27
APBB3-219ENST00000511896 MPHOSPH8Q99549 860 aa22.99■■□□□ 1.27
APBB3-219ENST00000511896 ZPR1O75312 459 aa22.99■■□□□ 1.27
APBB3-219ENST00000511896 ZKSCAN1P17029 563 aaPredicted RBP22.99■■□□□ 1.27
APBB3-219ENST00000511896 SCARF1Q14162 830 aa22.99■■□□□ 1.27
APBB3-219ENST00000511896 ERFEQ4G0M1 354 aa22.99■■□□□ 1.27
APBB3-219ENST00000511896 ARHGEF1Q92888 912 aaKnown RBP22.98■■□□□ 1.27
APBB3-219ENST00000511896 TTC14Q96N46 770 aa22.98■■□□□ 1.27
APBB3-219ENST00000511896 RAB3GAP1Q15042 981 aa22.98■■□□□ 1.27
APBB3-219ENST00000511896 PUM3Q15397 648 aaKnown RBP22.98■■□□□ 1.27
APBB3-219ENST00000511896 ADCK5Q3MIX3 580 aa22.98■■□□□ 1.27
APBB3-219ENST00000511896 HELBQ8NG08 1087 aaPredicted RBP22.98■■□□□ 1.27
APBB3-219ENST00000511896 TM6SF1Q9BZW5 370 aa22.98■■□□□ 1.27
APBB3-219ENST00000511896 SLC27A2O14975 620 aa22.97■■□□□ 1.27
APBB3-219ENST00000511896 CASTP20810 708 aaKnown RBP22.97■■□□□ 1.27
APBB3-219ENST00000511896 FGFR2P21802 821 aa22.97■■□□□ 1.27
APBB3-219ENST00000511896 ZNF512BQ96KM6 892 aaPredicted RBP22.97■■□□□ 1.27
APBB3-219ENST00000511896 CWC22Q9HCG8 908 aaKnown RBP22.97■■□□□ 1.27
APBB3-219ENST00000511896 HELLSQ9NRZ9 838 aa22.97■■□□□ 1.27
APBB3-219ENST00000511896 SLFNL1Q499Z3 407 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 ZMYM1Q5SVZ6 1142 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 CCDC129Q6ZRS4 1044 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 FAM196AQ6ZSG2 479 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 ZGPATQ8N5A5 531 aaKnown RBP22.96■■□□□ 1.27
APBB3-219ENST00000511896 LPIN2Q92539 896 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 LRRC4BQ9NT99 713 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 IGHMBP2P38935 993 aaKnown RBP22.96■■□□□ 1.27
APBB3-219ENST00000511896 CUL4AQ13619 759 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 SF3B3Q15393 1217 aaKnown RBP22.96■■□□□ 1.27
APBB3-219ENST00000511896 RNF20Q5VTR2 975 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 JAKMIP1Q96N16 626 aaKnown RBP22.96■■□□□ 1.27
APBB3-219ENST00000511896 SETDB2Q96T68 719 aa22.96■■□□□ 1.27
APBB3-219ENST00000511896 C4BP0C0L5 1744 aa22.95■■□□□ 1.26
APBB3-219ENST00000511896 RNF113AO15541 343 aaKnown RBP22.95■■□□□ 1.26
APBB3-219ENST00000511896 ZAP70P43403 619 aa22.95■■□□□ 1.26
APBB3-219ENST00000511896 SLC10A5Q5PT55 438 aa22.95■■□□□ 1.26
APBB3-219ENST00000511896 NOL8Q76FK4 1167 aaKnown RBP22.95■■□□□ 1.26
APBB3-219ENST00000511896 KRT27Q7Z3Y8 459 aa22.95■■□□□ 1.26
APBB3-219ENST00000511896 ZSWIM6Q9HCJ5 1215 aa22.95■■□□□ 1.26
APBB3-219ENST00000511896 SSFA2P28290 1259 aa22.94■■□□□ 1.26
APBB3-219ENST00000511896 MCAMP43121 646 aa22.94■■□□□ 1.26
APBB3-219ENST00000511896 PI16Q6UXB8 463 aa22.94■■□□□ 1.26
APBB3-219ENST00000511896 C3orf67Q6ZVT6 689 aa22.94■■□□□ 1.26
APBB3-219ENST00000511896 TNPO1Q92973 898 aaKnown RBP22.94■■□□□ 1.26
APBB3-219ENST00000511896 GTF2E1P29083 439 aaPredicted RBP22.94■■□□□ 1.26
APBB3-219ENST00000511896 NYXQ9GZU5 481 aa22.94■■□□□ 1.26
APBB3-219ENST00000511896 HMG20BQ9P0W2 317 aa22.94■■□□□ 1.26
APBB3-219ENST00000511896 AKAP11Q9UKA4 1901 aa22.93■■□□□ 1.26
APBB3-219ENST00000511896 CPA1P15085 419 aa22.93■■□□□ 1.26
APBB3-219ENST00000511896 MCM4P33991 863 aa22.93■■□□□ 1.26
APBB3-219ENST00000511896 TSGA10IPQ3SY00 556 aa22.93■■□□□ 1.26
APBB3-219ENST00000511896 CCDC102BQ68D86 513 aa22.93■■□□□ 1.26
APBB3-219ENST00000511896 CDC5LQ99459 802 aaKnown RBP22.93■■□□□ 1.26
APBB3-219ENST00000511896 AK2P54819 239 aa22.92■■□□□ 1.26
APBB3-219ENST00000511896 LRRFIP1Q32MZ4 808 aaKnown RBP22.92■■□□□ 1.26
APBB3-219ENST00000511896 TRAPPC3LQ5T215 181 aa22.92■■□□□ 1.26
APBB3-219ENST00000511896 CYP46A1Q9Y6A2 500 aa22.92■■□□□ 1.26
APBB3-219ENST00000511896 BRWD3Q6RI45 1802 aa22.92■■□□□ 1.26
APBB3-219ENST00000511896 RFC4P35249 363 aa22.92■■□□□ 1.26
APBB3-219ENST00000511896 PHKA1P46020 1223 aa22.92■■□□□ 1.26
APBB3-219ENST00000511896 RUFY3Q7L099 469 aa22.92■■□□□ 1.26
APBB3-219ENST00000511896 INTS4Q96HW7 963 aaKnown RBP22.92■■□□□ 1.26
APBB3-219ENST00000511896 U3KPZ7 1027 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms