RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 APLP1P51693 650 aa14.72□□□□□ -0.05
SH3RF1-205ENST00000511421 EPHA10Q5JZY3 1008 aa14.72□□□□□ -0.05
SH3RF1-205ENST00000511421 EYA3Q99504 573 aa14.72□□□□□ -0.05
SH3RF1-205ENST00000511421 GGA1Q9UJY5 639 aa14.72□□□□□ -0.05
SH3RF1-205ENST00000511421 MINPP1Q9UNW1 487 aa14.72□□□□□ -0.05
SH3RF1-205ENST00000511421 XDHP47989 1333 aa14.72□□□□□ -0.05
SH3RF1-205ENST00000511421 UFL1O94874 794 aa14.71□□□□□ -0.05
SH3RF1-205ENST00000511421 CIAPIN1Q6FI81 312 aa14.71□□□□□ -0.05
SH3RF1-205ENST00000511421 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
SH3RF1-205ENST00000511421 SMC4Q9NTJ3 1288 aa14.71□□□□□ -0.05
SH3RF1-205ENST00000511421 C9orf78Q9NZ63 289 aaPredicted RBP14.71□□□□□ -0.05
SH3RF1-205ENST00000511421 UTYO14607 1347 aa14.71□□□□□ -0.05
SH3RF1-205ENST00000511421 RAD17O75943 681 aa14.71□□□□□ -0.06
SH3RF1-205ENST00000511421 EPS15P42566 896 aa14.71□□□□□ -0.06
SH3RF1-205ENST00000511421 BRPF1P55201 1214 aaPredicted RBP14.71□□□□□ -0.06
SH3RF1-205ENST00000511421 LDHDQ86WU2 507 aa14.71□□□□□ -0.06
SH3RF1-205ENST00000511421 DBNDD1Q9H9R9 158 aa14.71□□□□□ -0.06
SH3RF1-205ENST00000511421 WTIPA6NIX2 430 aaPredicted RBP14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 NBPF7P0C2Y1 421 aaPredicted RBP14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 ATP2B4P23634 1241 aa14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 IGHMBP2P38935 993 aaKnown RBP14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 HNRNPUQ00839 825 aaKnown RBP eCLIP14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 DOK7Q18PE1 504 aa14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 EAPPQ56P03 285 aaPredicted RBP14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 LMBR1LQ6UX01 489 aa14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 KAZALD1Q96I82 304 aa14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 ZC3H12CQ9C0D7 883 aaKnown RBP14.7□□□□□ -0.06
SH3RF1-205ENST00000511421 ANKRD18BA2A2Z9 1011 aa14.69□□□□□ -0.06
SH3RF1-205ENST00000511421 ECE2O60344 883 aa14.69□□□□□ -0.06
SH3RF1-205ENST00000511421 LMOD1P29536 600 aaPredicted RBP14.69□□□□□ -0.06
SH3RF1-205ENST00000511421 GMPSP49915 693 aaPredicted RBP14.69□□□□□ -0.06
SH3RF1-205ENST00000511421 TNIP1Q15025 636 aa14.69□□□□□ -0.06
SH3RF1-205ENST00000511421 PNMA8AQ86V59 439 aaPredicted RBP14.69□□□□□ -0.06
SH3RF1-205ENST00000511421 KCNQ5Q9NR82 932 aa14.69□□□□□ -0.06
SH3RF1-205ENST00000511421 GPRC5DQ9NZD1 345 aa14.69□□□□□ -0.06
SH3RF1-205ENST00000511421 RARSP54136 660 aaKnown RBP14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 SUCLG2Q96I99 432 aa14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 PSMD14O00487 310 aa14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 CCT4P50991 539 aaKnown RBP14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 HTRA3P83110 453 aa14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 IFIT5Q13325 482 aaKnown RBP14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 DNAJC5GQ8N7S2 189 aa14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 MPHOSPH8Q99549 860 aa14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 NOB1Q9ULX3 412 aaKnown RBP14.68□□□□□ -0.06
SH3RF1-205ENST00000511421 ADAMTSL1Q8N6G6 1762 aa14.67□□□□□ -0.06
SH3RF1-205ENST00000511421 USP44Q9H0E7 712 aa14.67□□□□□ -0.06
SH3RF1-205ENST00000511421 CHMP3Q9Y3E7 222 aa14.67□□□□□ -0.06
SH3RF1-205ENST00000511421 ITGBL1O95965 494 aaPredicted RBP14.66□□□□□ -0.06
SH3RF1-205ENST00000511421 USP50Q70EL3 339 aaPredicted RBP14.66□□□□□ -0.06
SH3RF1-205ENST00000511421 ANKRD2Q9GZV1 360 aa14.66□□□□□ -0.06
SH3RF1-205ENST00000511421 ADARB2Q9NS39 739 aaKnown RBP14.66□□□□□ -0.06
SH3RF1-205ENST00000511421 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
SH3RF1-205ENST00000511421 LEMD3Q9Y2U8 911 aa14.66□□□□□ -0.06
SH3RF1-205ENST00000511421 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
SH3RF1-205ENST00000511421 MED23Q9ULK4 1368 aa14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 CHRNDQ07001 517 aa14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 CCDC57Q2TAC2 916 aa14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 RABL6Q3YEC7 729 aaPredicted RBP14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 ZNF594Q96JF6 807 aaPredicted RBP14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 SPEF2Q9C093 1822 aa14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 SHTN1A0MZ66 631 aa14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 VIL1P09327 827 aaKnown RBP14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 MAP1SQ66K74 1059 aaPredicted RBP14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 TXNRD3Q86VQ6 643 aa14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 ANKRD44Q8N8A2 993 aa14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 DPF2Q92785 391 aa14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 BICC1Q9H694 974 aaKnown RBP14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 CNOT7Q9UIV1 285 aaKnown RBP14.65□□□□□ -0.06
SH3RF1-205ENST00000511421 ZNF804BA4D1E1 1349 aa14.64□□□□□ -0.07
SH3RF1-205ENST00000511421 SCN9AQ15858 1988 aa14.64□□□□□ -0.07
SH3RF1-205ENST00000511421 G3V3G9 751 aa14.64□□□□□ -0.07
SH3RF1-205ENST00000511421 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
SH3RF1-205ENST00000511421 PODNQ7Z5L7 613 aa14.64□□□□□ -0.07
SH3RF1-205ENST00000511421 CNTROBQ8N137 903 aa14.64□□□□□ -0.07
SH3RF1-205ENST00000511421 API5Q9BZZ5 524 aaKnown RBP14.64□□□□□ -0.07
SH3RF1-205ENST00000511421 RPS12P25398 132 aaKnown RBP14.63□□□□□ -0.07
SH3RF1-205ENST00000511421 KLRK1P26718 216 aa14.63□□□□□ -0.07
SH3RF1-205ENST00000511421 HIRAP54198 1017 aaPredicted RBP14.63□□□□□ -0.07
SH3RF1-205ENST00000511421 MICALL2Q8IY33 904 aa14.63□□□□□ -0.07
SH3RF1-205ENST00000511421 HELBQ8NG08 1087 aaPredicted RBP14.63□□□□□ -0.07
SH3RF1-205ENST00000511421 ARHGAP45Q92619 1136 aa14.63□□□□□ -0.07
SH3RF1-205ENST00000511421 SNAP23O00161 211 aa14.62□□□□□ -0.07
SH3RF1-205ENST00000511421 TAF5LO75529 589 aa14.62□□□□□ -0.07
SH3RF1-205ENST00000511421 TAF7LQ5H9L4 462 aa14.62□□□□□ -0.07
SH3RF1-205ENST00000511421 LDHAL6AQ6ZMR3 332 aa14.62□□□□□ -0.07
SH3RF1-205ENST00000511421 TRPM4Q8TD43 1214 aa14.62□□□□□ -0.07
SH3RF1-205ENST00000511421 ZBED9Q6R2W3 1325 aa14.62□□□□□ -0.07
SH3RF1-205ENST00000511421 KIF16BQ96L93 1317 aa14.62□□□□□ -0.07
SH3RF1-205ENST00000511421 IRS2Q9Y4H2 1338 aa14.62□□□□□ -0.07
SH3RF1-205ENST00000511421 H7C1D1 291 aa14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 BCAR3O75815 825 aa14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 PUS3Q9BZE2 481 aaKnown RBP14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 COA1Q9GZY4 146 aa14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 PGAP2Q9UHJ9 254 aa14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 RSBN1LQ6PCB5 846 aaPredicted RBP14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 C15orf52Q6ZUT6 534 aaKnown RBP14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 KLRG1Q96E93 195 aa14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 GMLQ99445 158 aa14.61□□□□□ -0.07
SH3RF1-205ENST00000511421 CNNM1Q9NRU3 951 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms