RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	HDLBP	Q00341	1268 aa	Known RBP	5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	PLAUR	Q03405	335 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	TBC1D8B	Q0IIM8	1120 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	HYAL2	Q12891	473 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	GRM2	Q14416	872 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	COL13A1	Q5TAT6	717 aa	Predicted RBP	5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	DHX32	Q7L7V1	743 aa	Known RBP	5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	CRELD1	Q96HD1	420 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	NSUN5	Q96P11	429 aa	Known RBP	5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	EHD4	Q9H223	541 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	SUV39H2	Q9H5I1	410 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	EFCC1	Q9HA90	598 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	SALL4	Q9UJQ4	1053 aa		5.05	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	USP17L7	P0C7H9	530 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	BMP4	P12644	408 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	ACPP	P15309	386 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	ZNF76	P36508	570 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	MLLT1	Q03111	559 aa	Predicted RBP	5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	FAM182B	Q5T319	152 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	KIAA0319	Q5VV43	1072 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	PEAR1	Q5VY43	1037 aa	Predicted RBP	5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	HFE2	Q6ZVN8	426 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	SYT9	Q86SS6	491 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	PPP4R2	Q9NY27	417 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	FAM8A1	Q9UBU6	413 aa		5.04	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	C2CD2L	O14523	706 aa		5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	TRPA1	O75762	1119 aa		5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	ERCC5	P28715	1186 aa	Predicted RBP	5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	SOX18	P35713	384 aa		5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	FANCC	Q00597	558 aa		5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	MEI1	Q5TIA1	1274 aa		5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	NANOS1	Q8WY41	292 aa	Known RBP	5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	RNF34	Q969K3	372 aa		5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	SPACA7	Q96KW9	195 aa		5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	OSMR	Q99650	979 aa		5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	UBE2O	Q9C0C9	1292 aa	Known RBP	5.03	□□□□□ -1.6
CALCOCO2-216	ENST00000509784	LOC102724428	A0A0B4J2F2	783 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	ZBTB42	B2RXF5	422 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784		J3QW42	95 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	KIF4A	O95239	1232 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	MX2	P20592	715 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	NRL	P54845	237 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	FCGRT	P55899	365 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	SIK1	P57059	783 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	PCBP4	P57723	403 aa	Known RBP	5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	TAF1C	Q15572	869 aa	Predicted RBP	5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	ZNF468	Q5VIY5	522 aa	Predicted RBP	5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	NT5DC4	Q86YG4	428 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	CEP120	Q8N960	986 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	GLIS3	Q8NEA6	775 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	ZKSCAN3	Q9BRR0	538 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	SRCIN1	Q9C0H9	1055 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	LIN7B	Q9HAP6	207 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	METTL5	Q9NRN9	209 aa	Known RBP	5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	DNAJB12	Q9NXW2	375 aa	Known RBP	5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	TRAK1	Q9UPV9	953 aa		5.02	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	GSTT1	P30711	240 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	GPLD1	P80108	840 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	DTHD1	Q6ZMT9	781 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	METTL16	Q86W50	562 aa	Known RBP	5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	TRPM4	Q8TD43	1214 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	CNTNAP3B	Q96NU0	1288 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	HHIP	Q96QV1	700 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	CNTNAP3	Q9BZ76	1288 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	DZANK1	Q9NVP4	752 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	NXF1	Q9UBU9	619 aa	Known RBP	5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	AKAP2	Q9Y2D5	859 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	USP31	Q70CQ4	1352 aa		5.01	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	TMEM238L	A0A1B0GVL6	79 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	GHRH	P01286	108 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	HOXD8	P13378	290 aa	Predicted RBP	5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	EIF2AK2	P19525	551 aa	Known RBP	5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	ATP11A	P98196	1134 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	GAS6	Q14393	721 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	PCSK7	Q16549	785 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	CCNJL	Q8IV13	435 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	GPR161	Q8N6U8	529 aa	Known RBP	5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	ASAP3	Q8TDY4	903 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	TCF12	Q99081	682 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	OXCT2	Q9BYC2	517 aa	Predicted RBP	5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	RASSF4	Q9H2L5	321 aa		5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	TTF2	Q9UNY4	1162 aa	Known RBP	5	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	METTL12	A8MUP2	240 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784		H3BM21	787 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	PDE2A	O00408	941 aa	Predicted RBP	4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	SIN3B	O75182	1162 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	CPB1	P15086	417 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	GRIA4	P48058	902 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	ZC3H6	P61129	1189 aa	Known RBP	4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	RAD51AP2	Q09MP3	1159 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	SPRED3	Q2MJR0	410 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	PRPF40B	Q6NWY9	871 aa	Known RBP	4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	HS2ST1	Q7LGA3	356 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	FAM35A	Q86V20	835 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	MICALL1	Q8N3F8	863 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	C3orf58	Q8NDZ4	430 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	PBX4	Q9BYU1	374 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	RBSN	Q9H1K0	784 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	ABCB6	Q9NP58	842 aa		4.99	□□□□□ -1.61
CALCOCO2-216	ENST00000509784	KLF15	Q9UIH9	416 aa		4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms