RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PSMD14O00487 310 aa16.18■□□□□ 0.18
KDM3B-206ENST00000509468 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
KDM3B-206ENST00000509468 ECE1P42892 770 aa16.18■□□□□ 0.18
KDM3B-206ENST00000509468 DOK7Q18PE1 504 aa16.18■□□□□ 0.18
KDM3B-206ENST00000509468 CST9Q5W186 159 aa16.18■□□□□ 0.18
KDM3B-206ENST00000509468 CDC37L1Q7L3B6 337 aa16.18■□□□□ 0.18
KDM3B-206ENST00000509468 CDC5LQ99459 802 aaKnown RBP16.18■□□□□ 0.18
KDM3B-206ENST00000509468 TRAF5O00463 557 aa16.17■□□□□ 0.18
KDM3B-206ENST00000509468 ECE2O60344 883 aa16.17■□□□□ 0.18
KDM3B-206ENST00000509468 HIRAP54198 1017 aaPredicted RBP16.17■□□□□ 0.18
KDM3B-206ENST00000509468 MAP2K1Q02750 393 aaPredicted RBP16.17■□□□□ 0.18
KDM3B-206ENST00000509468 MICALL2Q8IY33 904 aa16.17■□□□□ 0.18
KDM3B-206ENST00000509468 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
KDM3B-206ENST00000509468 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
KDM3B-206ENST00000509468 MYH3P11055 1940 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 H7C1W4 665 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 UFL1O94874 794 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 CTCFP49711 727 aaPredicted RBP16.16■□□□□ 0.18
KDM3B-206ENST00000509468 CTSWP56202 376 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 FMR1Q06787 632 aaKnown RBP eCLIP16.16■□□□□ 0.18
KDM3B-206ENST00000509468 G2E3Q7L622 706 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 TTLL11Q8NHH1 800 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 WBP1LQ9NX94 342 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
KDM3B-206ENST00000509468 TLL2Q9Y6L7 1015 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 XDHP47989 1333 aa16.16■□□□□ 0.18
KDM3B-206ENST00000509468 VAMP4O75379 141 aa16.15■□□□□ 0.18
KDM3B-206ENST00000509468 VIL1P09327 827 aaKnown RBP16.15■□□□□ 0.18
KDM3B-206ENST00000509468 ATP2B4P23634 1241 aa16.15■□□□□ 0.18
KDM3B-206ENST00000509468 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
KDM3B-206ENST00000509468 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
KDM3B-206ENST00000509468 KCNQ5Q9NR82 932 aa16.15■□□□□ 0.18
KDM3B-206ENST00000509468 FOXN1O15353 648 aa16.14■□□□□ 0.17
KDM3B-206ENST00000509468 CELF2O95319 508 aaKnown RBP16.14■□□□□ 0.17
KDM3B-206ENST00000509468 FLIIQ13045 1269 aa16.14■□□□□ 0.17
KDM3B-206ENST00000509468 FKBP5Q13451 457 aaPredicted RBP16.14■□□□□ 0.17
KDM3B-206ENST00000509468 PAXIP1Q6ZW49 1069 aaPredicted RBP16.14■□□□□ 0.17
KDM3B-206ENST00000509468 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
KDM3B-206ENST00000509468 GPR101Q96P66 508 aaPredicted RBP16.14■□□□□ 0.17
KDM3B-206ENST00000509468 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.17
KDM3B-206ENST00000509468 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
KDM3B-206ENST00000509468 BSDC1Q9NW68 430 aaPredicted RBP16.14■□□□□ 0.17
KDM3B-206ENST00000509468 COL4A1P02462 1669 aa16.14■□□□□ 0.17
KDM3B-206ENST00000509468 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
KDM3B-206ENST00000509468 GCKRQ14397 625 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 UBE3BQ7Z3V4 1068 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 PODNQ7Z5L7 613 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 USP48Q86UV5 1035 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 TRPM4Q8TD43 1214 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 DCPSQ96C86 337 aaKnown RBP16.13■□□□□ 0.17
KDM3B-206ENST00000509468 HHIPL1Q96JK4 782 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 CAPNS2Q96L46 248 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 BEGAINQ9BUH8 593 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 POLR2AP24928 1970 aaKnown RBP16.13■□□□□ 0.17
KDM3B-206ENST00000509468 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
KDM3B-206ENST00000509468 SHTN1A0MZ66 631 aa16.12■□□□□ 0.17
KDM3B-206ENST00000509468 MAP2K2P36507 400 aa16.12■□□□□ 0.17
KDM3B-206ENST00000509468 EXOSC9Q06265 439 aaKnown RBP16.12■□□□□ 0.17
KDM3B-206ENST00000509468 TBC1D10BQ4KMP7 808 aaPredicted RBP16.12■□□□□ 0.17
KDM3B-206ENST00000509468 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
KDM3B-206ENST00000509468 SAPCD2Q86UD0 394 aa16.12■□□□□ 0.17
KDM3B-206ENST00000509468 LINS1Q8NG48 757 aa16.12■□□□□ 0.17
KDM3B-206ENST00000509468 DNAAF4Q8WXU2 420 aa16.12■□□□□ 0.17
KDM3B-206ENST00000509468 PLA2G12BQ9BX93 195 aa16.12■□□□□ 0.17
KDM3B-206ENST00000509468 GREM2Q9H772 168 aa16.12■□□□□ 0.17
KDM3B-206ENST00000509468 MINPP1Q9UNW1 487 aa16.12■□□□□ 0.17
KDM3B-206ENST00000509468 IGHMBP2P38935 993 aaKnown RBP16.11■□□□□ 0.17
KDM3B-206ENST00000509468 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
KDM3B-206ENST00000509468 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
KDM3B-206ENST00000509468 AGBL3Q8NEM8 1001 aa16.11■□□□□ 0.17
KDM3B-206ENST00000509468 GRM1Q13255 1194 aa16.1■□□□□ 0.17
KDM3B-206ENST00000509468 RSBN1LQ6PCB5 846 aaPredicted RBP16.1■□□□□ 0.17
KDM3B-206ENST00000509468 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
KDM3B-206ENST00000509468 ANKRD2Q9GZV1 360 aa16.1■□□□□ 0.17
KDM3B-206ENST00000509468 ZNF408Q9H9D4 720 aa16.1■□□□□ 0.17
KDM3B-206ENST00000509468 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
KDM3B-206ENST00000509468 SCN9AQ15858 1988 aa16.09■□□□□ 0.17
KDM3B-206ENST00000509468 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
KDM3B-206ENST00000509468 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
KDM3B-206ENST00000509468 CSF1RP07333 972 aa16.09■□□□□ 0.17
KDM3B-206ENST00000509468 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
KDM3B-206ENST00000509468 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
KDM3B-206ENST00000509468 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
KDM3B-206ENST00000509468 PSME4Q14997 1843 aa16.08■□□□□ 0.17
KDM3B-206ENST00000509468 SPEF2Q9C093 1822 aa16.08■□□□□ 0.17
KDM3B-206ENST00000509468 USP17L8P0C7I0 530 aa16.08■□□□□ 0.16
KDM3B-206ENST00000509468 ITGA6P23229 1130 aa16.08■□□□□ 0.16
KDM3B-206ENST00000509468 LBX1P52954 281 aa16.08■□□□□ 0.16
KDM3B-206ENST00000509468 ZNF280AP59817 542 aaPredicted RBP16.08■□□□□ 0.16
KDM3B-206ENST00000509468 KIF4BQ2VIQ3 1234 aa16.08■□□□□ 0.16
KDM3B-206ENST00000509468 SULF1Q8IWU6 871 aa16.08■□□□□ 0.16
KDM3B-206ENST00000509468 C2orf69Q8N8R5 385 aa16.08■□□□□ 0.16
KDM3B-206ENST00000509468 CAPN15O75808 1086 aa16.07■□□□□ 0.16
KDM3B-206ENST00000509468 EGFRP00533 1210 aa16.07■□□□□ 0.16
KDM3B-206ENST00000509468 MMP14P50281 582 aa16.07■□□□□ 0.16
KDM3B-206ENST00000509468 CASP7P55210 303 aa16.07■□□□□ 0.16
KDM3B-206ENST00000509468 COA1Q9GZY4 146 aa16.07■□□□□ 0.16
KDM3B-206ENST00000509468 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
KDM3B-206ENST00000509468 ZNF609O15014 1411 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms