RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 ZBTB38Q8NAP3 1195 aaPredicted RBP13.36□□□□□ -0.27
COPS4-206ENST00000509093 BBXQ8WY36 941 aaPredicted RBP13.36□□□□□ -0.27
COPS4-206ENST00000509093 ZNF594Q96JF6 807 aaPredicted RBP13.36□□□□□ -0.27
COPS4-206ENST00000509093 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
COPS4-206ENST00000509093 COL5A3P25940 1745 aaPredicted RBP13.35□□□□□ -0.27
COPS4-206ENST00000509093 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
COPS4-206ENST00000509093 ZNF830Q96NB3 372 aaPredicted RBP13.35□□□□□ -0.27
COPS4-206ENST00000509093 TTC12Q9H892 705 aaPredicted RBP13.35□□□□□ -0.27
COPS4-206ENST00000509093 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 MAP4K4O95819 1239 aaPredicted RBP13.34□□□□□ -0.27
COPS4-206ENST00000509093 MCM2P49736 904 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 HSP90AB3PQ58FF7 597 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 AMIGO3Q86WK7 504 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 PI4K2BQ8TCG2 481 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 EAF2Q96CJ1 260 aaPredicted RBP13.34□□□□□ -0.27
COPS4-206ENST00000509093 USP25Q9UHP3 1055 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
COPS4-206ENST00000509093 NUP98P52948 1817 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 ADCY5O95622 1261 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 CHAF1AQ13111 956 aaPredicted RBP13.34□□□□□ -0.27
COPS4-206ENST00000509093 CUL4AQ13619 759 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
COPS4-206ENST00000509093 AACSQ86V21 672 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 ERC1Q8IUD2 1116 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
COPS4-206ENST00000509093 FOXD4L4Q8WXT5 416 aaPredicted RBP13.34□□□□□ -0.27
COPS4-206ENST00000509093 TLR7Q9NYK1 1049 aaKnown RBP13.34□□□□□ -0.27
COPS4-206ENST00000509093 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
COPS4-206ENST00000509093 TFCP2Q12800 502 aa13.33□□□□□ -0.28
COPS4-206ENST00000509093 SUSD4Q5VX71 490 aa13.33□□□□□ -0.28
COPS4-206ENST00000509093 KRT27Q7Z3Y8 459 aa13.33□□□□□ -0.28
COPS4-206ENST00000509093 C17orf53Q8N3J3 647 aaPredicted RBP13.33□□□□□ -0.28
COPS4-206ENST00000509093 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
COPS4-206ENST00000509093 FEZ1Q99689 392 aa13.33□□□□□ -0.28
COPS4-206ENST00000509093 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
COPS4-206ENST00000509093 TRMT112Q9UI30 125 aaKnown RBP13.33□□□□□ -0.28
COPS4-206ENST00000509093 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
COPS4-206ENST00000509093 BRWD3Q6RI45 1802 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 CTIFO43310 598 aaKnown RBP13.32□□□□□ -0.28
COPS4-206ENST00000509093 LRRC24Q50LG9 513 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 INTS4Q96HW7 963 aaKnown RBP13.32□□□□□ -0.28
COPS4-206ENST00000509093 PUS3Q9BZE2 481 aaKnown RBP13.32□□□□□ -0.28
COPS4-206ENST00000509093 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
COPS4-206ENST00000509093 ZNF831Q5JPB2 1677 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 ANKRD36CQ5JPF3 1778 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 ERC2O15083 957 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 ATG9AQ7Z3C6 839 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 RILPL2Q969X0 211 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 PLA2G12BQ9BX93 195 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
COPS4-206ENST00000509093 TRIM6-TRIM34B2RNG4 842 aa13.31□□□□□ -0.28
COPS4-206ENST00000509093 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
COPS4-206ENST00000509093 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
COPS4-206ENST00000509093 TRIM37O94972 964 aa13.31□□□□□ -0.28
COPS4-206ENST00000509093 TPM3P06753 285 aa13.31□□□□□ -0.28
COPS4-206ENST00000509093 IFIT2P09913 472 aaKnown RBP13.31□□□□□ -0.28
COPS4-206ENST00000509093 U2AF2P26368 475 aaKnown RBP eCLIP13.31□□□□□ -0.28
COPS4-206ENST00000509093 CCDC183Q5T5S1 534 aa13.31□□□□□ -0.28
COPS4-206ENST00000509093 MPNDQ8N594 471 aa13.31□□□□□ -0.28
COPS4-206ENST00000509093 AOX1Q06278 1338 aa13.31□□□□□ -0.28
COPS4-206ENST00000509093 CDHR2Q9BYE9 1310 aa13.31□□□□□ -0.28
COPS4-206ENST00000509093 USP42Q9H9J4 1324 aaKnown RBP13.31□□□□□ -0.28
COPS4-206ENST00000509093 GNPATO15228 680 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 CSF1RP07333 972 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 PDE4CQ08493 712 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 TMEM87AQ8NBN3 555 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 KIAA1524Q8TCG1 905 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
COPS4-206ENST00000509093 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
COPS4-206ENST00000509093 TUBGCP6Q96RT7 1819 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 HCLS1P14317 486 aaPredicted RBP13.3□□□□□ -0.28
COPS4-206ENST00000509093 RBM6P78332 1123 aaKnown RBP13.3□□□□□ -0.28
COPS4-206ENST00000509093 GABPB1Q06547 395 aaPredicted RBP13.3□□□□□ -0.28
COPS4-206ENST00000509093 ZNF772Q68DY9 489 aaPredicted RBP13.3□□□□□ -0.28
COPS4-206ENST00000509093 FAM196AQ6ZSG2 479 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 TTLL11Q8NHH1 800 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 OGFRQ9NZT2 677 aa13.3□□□□□ -0.28
COPS4-206ENST00000509093 GADD45BO75293 160 aaPredicted RBP13.29□□□□□ -0.28
COPS4-206ENST00000509093 RPS6KA4O75676 772 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 NEK4P51957 841 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
COPS4-206ENST00000509093 GREM2Q9H772 168 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 KDM4AO75164 1064 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 CTSWP56202 376 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 SYCP1Q15431 976 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 TNNI3KQ59H18 835 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 ECHDC1Q9NTX5 307 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 FPGT-TNNI3KV9GXZ4 949 aa13.29□□□□□ -0.28
COPS4-206ENST00000509093 LY75O60449 1722 aa13.28□□□□□ -0.28
COPS4-206ENST00000509093 TTC41PQ6P2S7 1318 aa13.28□□□□□ -0.28
COPS4-206ENST00000509093 EYA2O00167 538 aa13.28□□□□□ -0.28
COPS4-206ENST00000509093 CCDC57Q2TAC2 916 aa13.28□□□□□ -0.28
COPS4-206ENST00000509093 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
COPS4-206ENST00000509093 BICDL1Q6ZP65 573 aa13.28□□□□□ -0.28
COPS4-206ENST00000509093 USP48Q86UV5 1035 aa13.28□□□□□ -0.28
COPS4-206ENST00000509093 UTP14AQ9BVJ6 771 aaKnown RBP13.28□□□□□ -0.28
COPS4-206ENST00000509093 TMEM51Q9NW97 253 aa13.28□□□□□ -0.28
COPS4-206ENST00000509093 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms