RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 NEURL1BA8MQ27 555 aa26.67■■□□□ 1.86
CLDND1-216ENST00000507944 H7C1D1 291 aa26.67■■□□□ 1.86
CLDND1-216ENST00000507944 ECE2O60344 883 aa26.67■■□□□ 1.86
CLDND1-216ENST00000507944 CTSWP56202 376 aa26.67■■□□□ 1.86
CLDND1-216ENST00000507944 FLIIQ13045 1269 aa26.67■■□□□ 1.86
CLDND1-216ENST00000507944 DPF2Q92785 391 aa26.67■■□□□ 1.86
CLDND1-216ENST00000507944 PGAP2Q9UHJ9 254 aa26.67■■□□□ 1.86
CLDND1-216ENST00000507944 ZBTB12Q9Y330 459 aaPredicted RBP26.67■■□□□ 1.86
CLDND1-216ENST00000507944 TRPM7Q96QT4 1865 aa26.66■■□□□ 1.86
CLDND1-216ENST00000507944 VAMP4O75379 141 aa26.66■■□□□ 1.86
CLDND1-216ENST00000507944 UFL1O94874 794 aa26.66■■□□□ 1.86
CLDND1-216ENST00000507944 HIRAP54198 1017 aaPredicted RBP26.66■■□□□ 1.86
CLDND1-216ENST00000507944 ZC3H15Q8WU90 426 aaKnown RBP26.66■■□□□ 1.86
CLDND1-216ENST00000507944 KCNQ5Q9NR82 932 aa26.66■■□□□ 1.86
CLDND1-216ENST00000507944 GGA1Q9UJY5 639 aa26.66■■□□□ 1.86
CLDND1-216ENST00000507944 SHTN1A0MZ66 631 aa26.65■■□□□ 1.86
CLDND1-216ENST00000507944 EXOSC9Q06265 439 aaKnown RBP26.65■■□□□ 1.86
CLDND1-216ENST00000507944 MICALL2Q8IY33 904 aa26.65■■□□□ 1.86
CLDND1-216ENST00000507944 FAM9BQ8IZU0 186 aa26.65■■□□□ 1.86
CLDND1-216ENST00000507944 TTLL11Q8NHH1 800 aa26.65■■□□□ 1.86
CLDND1-216ENST00000507944 TRPM4Q8TD43 1214 aa26.65■■□□□ 1.86
CLDND1-216ENST00000507944 H7C1W4 665 aa26.64■■□□□ 1.86
CLDND1-216ENST00000507944 FKBP5Q13451 457 aaPredicted RBP26.64■■□□□ 1.86
CLDND1-216ENST00000507944 CST9Q5W186 159 aa26.64■■□□□ 1.86
CLDND1-216ENST00000507944 CDC5LQ99459 802 aaKnown RBP26.64■■□□□ 1.86
CLDND1-216ENST00000507944 MYH3P11055 1940 aa26.64■■□□□ 1.86
CLDND1-216ENST00000507944 G3V3G9 751 aa26.63■■□□□ 1.85
CLDND1-216ENST00000507944 DCAF8Q5TAQ9 597 aa26.63■■□□□ 1.85
CLDND1-216ENST00000507944 XDHP47989 1333 aa26.63■■□□□ 1.85
CLDND1-216ENST00000507944 RTL9Q8NET4 1388 aa26.62■■□□□ 1.85
CLDND1-216ENST00000507944 RPS12P25398 132 aaKnown RBP26.62■■□□□ 1.85
CLDND1-216ENST00000507944 UBE3BQ7Z3V4 1068 aa26.62■■□□□ 1.85
CLDND1-216ENST00000507944 DNAAF4Q8WXU2 420 aa26.62■■□□□ 1.85
CLDND1-216ENST00000507944 GLIS2Q9BZE0 524 aaPredicted RBP26.62■■□□□ 1.85
CLDND1-216ENST00000507944 GREM2Q9H772 168 aa26.62■■□□□ 1.85
CLDND1-216ENST00000507944 GCKRQ14397 625 aa26.61■■□□□ 1.85
CLDND1-216ENST00000507944 SPINK5Q9NQ38 1064 aaPredicted RBP26.61■■□□□ 1.85
CLDND1-216ENST00000507944 WDR33Q9C0J8 1336 aaKnown RBP26.61■■□□□ 1.85
CLDND1-216ENST00000507944 SCN9AQ15858 1988 aa26.6■■□□□ 1.85
CLDND1-216ENST00000507944 ATP2B4P23634 1241 aa26.6■■□□□ 1.85
CLDND1-216ENST00000507944 CDC37L1Q7L3B6 337 aa26.6■■□□□ 1.85
CLDND1-216ENST00000507944 SAMD7Q7Z3H4 446 aa26.6■■□□□ 1.85
CLDND1-216ENST00000507944 TNS4Q8IZW8 715 aa26.6■■□□□ 1.85
CLDND1-216ENST00000507944 BSDC1Q9NW68 430 aaPredicted RBP26.6■■□□□ 1.85
CLDND1-216ENST00000507944 FOXN1O15353 648 aa26.59■■□□□ 1.85
CLDND1-216ENST00000507944 VIL1P09327 827 aaKnown RBP26.59■■□□□ 1.85
CLDND1-216ENST00000507944 LINS1Q8NG48 757 aa26.59■■□□□ 1.85
CLDND1-216ENST00000507944 MYH16Q9H6N6 1097 aa26.59■■□□□ 1.85
CLDND1-216ENST00000507944 POLR2AP24928 1970 aaKnown RBP26.58■■□□□ 1.85
CLDND1-216ENST00000507944 CELF2O95319 508 aaKnown RBP26.58■■□□□ 1.85
CLDND1-216ENST00000507944 TBC1D10BQ4KMP7 808 aaPredicted RBP26.58■■□□□ 1.85
CLDND1-216ENST00000507944 AIDAQ96BJ3 306 aa26.58■■□□□ 1.85
CLDND1-216ENST00000507944 PLA2G12BQ9BX93 195 aa26.58■■□□□ 1.85
CLDND1-216ENST00000507944 WBP1LQ9NX94 342 aa26.58■■□□□ 1.85
CLDND1-216ENST00000507944 MINPP1Q9UNW1 487 aa26.58■■□□□ 1.85
CLDND1-216ENST00000507944 TLL2Q9Y6L7 1015 aa26.58■■□□□ 1.85
CLDND1-216ENST00000507944 PAXIP1Q6ZW49 1069 aaPredicted RBP26.57■■□□□ 1.84
CLDND1-216ENST00000507944 CASP7P55210 303 aa26.56■■□□□ 1.84
CLDND1-216ENST00000507944 RBM26Q5T8P6 1007 aaKnown RBP26.56■■□□□ 1.84
CLDND1-216ENST00000507944 CAPNS2Q96L46 248 aa26.56■■□□□ 1.84
CLDND1-216ENST00000507944 EGFRP00533 1210 aa26.55■■□□□ 1.84
CLDND1-216ENST00000507944 ECE1P42892 770 aa26.55■■□□□ 1.84
CLDND1-216ENST00000507944 USP48Q86UV5 1035 aa26.55■■□□□ 1.84
CLDND1-216ENST00000507944 SPEF2Q9C093 1822 aa26.54■■□□□ 1.84
CLDND1-216ENST00000507944 WTIPA6NIX2 430 aaPredicted RBP26.54■■□□□ 1.84
CLDND1-216ENST00000507944 IGHMBP2P38935 993 aaKnown RBP26.54■■□□□ 1.84
CLDND1-216ENST00000507944 CYP4F22Q6NT55 531 aa26.54■■□□□ 1.84
CLDND1-216ENST00000507944 ZNF408Q9H9D4 720 aa26.54■■□□□ 1.84
CLDND1-216ENST00000507944 CSF1RP07333 972 aa26.53■■□□□ 1.84
CLDND1-216ENST00000507944 ITGA6P23229 1130 aa26.53■■□□□ 1.84
CLDND1-216ENST00000507944 CTCFP49711 727 aaPredicted RBP26.53■■□□□ 1.84
CLDND1-216ENST00000507944 MAP2K1Q02750 393 aaPredicted RBP26.53■■□□□ 1.84
CLDND1-216ENST00000507944 GRM1Q13255 1194 aa26.53■■□□□ 1.84
CLDND1-216ENST00000507944 SAPCD2Q86UD0 394 aa26.53■■□□□ 1.84
CLDND1-216ENST00000507944 F6X3S4 739 aa26.52■■□□□ 1.84
CLDND1-216ENST00000507944 CCT4P50991 539 aaKnown RBP26.52■■□□□ 1.84
CLDND1-216ENST00000507944 RSBN1LQ6PCB5 846 aaPredicted RBP26.52■■□□□ 1.84
CLDND1-216ENST00000507944 PODNQ7Z5L7 613 aa26.52■■□□□ 1.84
CLDND1-216ENST00000507944 AGBL3Q8NEM8 1001 aa26.52■■□□□ 1.84
CLDND1-216ENST00000507944 KIF4BQ2VIQ3 1234 aa26.51■■□□□ 1.83
CLDND1-216ENST00000507944 FAM161AQ3B820 660 aa26.51■■□□□ 1.83
CLDND1-216ENST00000507944 DCPSQ96C86 337 aaKnown RBP26.51■■□□□ 1.83
CLDND1-216ENST00000507944 MED23Q9ULK4 1368 aa26.5■■□□□ 1.83
CLDND1-216ENST00000507944 BEND3Q5T5X7 828 aa26.5■■□□□ 1.83
CLDND1-216ENST00000507944 KRT26Q7Z3Y9 468 aa26.5■■□□□ 1.83
CLDND1-216ENST00000507944 PRDM10Q9NQV6 1147 aa26.5■■□□□ 1.83
CLDND1-216ENST00000507944 PSME4Q14997 1843 aa26.5■■□□□ 1.83
CLDND1-216ENST00000507944 USP17L3A6NCW0 530 aa26.49■■□□□ 1.83
CLDND1-216ENST00000507944 USP17L4A6NCW7 530 aa26.49■■□□□ 1.83
CLDND1-216ENST00000507944 DLK2Q6UY11 383 aa26.49■■□□□ 1.83
CLDND1-216ENST00000507944 USP17L1Q7RTZ2 530 aa26.49■■□□□ 1.83
CLDND1-216ENST00000507944 MPHOSPH8Q99549 860 aa26.49■■□□□ 1.83
CLDND1-216ENST00000507944 LEMD3Q9Y2U8 911 aa26.49■■□□□ 1.83
CLDND1-216ENST00000507944 ZNF280AP59817 542 aaPredicted RBP26.48■■□□□ 1.83
CLDND1-216ENST00000507944 HHIPL1Q96JK4 782 aa26.48■■□□□ 1.83
CLDND1-216ENST00000507944 GMLQ99445 158 aa26.48■■□□□ 1.83
CLDND1-216ENST00000507944 ANKRD2Q9GZV1 360 aa26.48■■□□□ 1.83
CLDND1-216ENST00000507944 ZNF609O15014 1411 aa26.48■■□□□ 1.83
CLDND1-216ENST00000507944 ZNF521Q96K83 1311 aa26.46■■□□□ 1.83
CLDND1-216ENST00000507944 ANKRD18BA2A2Z9 1011 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms