RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 RTL9Q8NET4 1388 aa20.67■□□□□ 0.9
TRAPPC11-204ENST00000505676 TIMM10P62072 90 aa20.67■□□□□ 0.9
TRAPPC11-204ENST00000505676 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
TRAPPC11-204ENST00000505676 GORABQ5T7V8 394 aa20.67■□□□□ 0.9
TRAPPC11-204ENST00000505676 DSCC1Q9BVC3 393 aa20.67■□□□□ 0.9
TRAPPC11-204ENST00000505676 RIPOR2Q9Y4F9 1068 aa20.67■□□□□ 0.9
TRAPPC11-204ENST00000505676 WDR33Q9C0J8 1336 aaKnown RBP20.67■□□□□ 0.9
TRAPPC11-204ENST00000505676 BCL9LQ86UU0 1499 aa20.67■□□□□ 0.9
TRAPPC11-204ENST00000505676 PUS3Q9BZE2 481 aaKnown RBP20.66■□□□□ 0.9
TRAPPC11-204ENST00000505676 ZMYM1Q5SVZ6 1142 aa20.66■□□□□ 0.9
TRAPPC11-204ENST00000505676 BLOC1S2Q6QNY1 142 aa20.66■□□□□ 0.9
TRAPPC11-204ENST00000505676 CLEC4GQ6UXB4 293 aa20.66■□□□□ 0.9
TRAPPC11-204ENST00000505676 LDHAL6AQ6ZMR3 332 aa20.66■□□□□ 0.9
TRAPPC11-204ENST00000505676 UTP14AQ9BVJ6 771 aaKnown RBP20.66■□□□□ 0.9
TRAPPC11-204ENST00000505676 RIC1Q4ADV7 1423 aa20.66■□□□□ 0.9
TRAPPC11-204ENST00000505676 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC11-204ENST00000505676 KLHL40Q2TBA0 621 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 METTL24Q5JXM2 366 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 ACSBG1Q96GR2 724 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 NGLY1Q96IV0 654 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 MROH5Q6ZUA9 1318 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 GOLIM4O00461 696 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 CAMTA2O94983 1202 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 HMGB1P09429 215 aaKnown RBP20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 ATP2B3Q16720 1220 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 ZNF589Q86UQ0 364 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 XAGE2Q96GT9 111 aa20.65■□□□□ 0.9
TRAPPC11-204ENST00000505676 UBN2Q6ZU65 1347 aa20.64■□□□□ 0.9
TRAPPC11-204ENST00000505676 KAT6BQ8WYB5 2073 aa20.64■□□□□ 0.9
TRAPPC11-204ENST00000505676 RNF113AO15541 343 aaKnown RBP20.64■□□□□ 0.89
TRAPPC11-204ENST00000505676 GREM2Q9H772 168 aa20.64■□□□□ 0.89
TRAPPC11-204ENST00000505676 EDC3Q96F86 508 aaKnown RBP20.63■□□□□ 0.89
TRAPPC11-204ENST00000505676 CNNM1Q9NRU3 951 aa20.63■□□□□ 0.89
TRAPPC11-204ENST00000505676 LAMB2P55268 1798 aa20.63■□□□□ 0.89
TRAPPC11-204ENST00000505676 ZSCAN25Q6NSZ9 544 aa20.63■□□□□ 0.89
TRAPPC11-204ENST00000505676 ZDHHC9Q9Y397 364 aa20.63■□□□□ 0.89
TRAPPC11-204ENST00000505676 CNTNAP4Q9C0A0 1308 aa20.63■□□□□ 0.89
TRAPPC11-204ENST00000505676 RPS6KB1P23443 525 aa20.62■□□□□ 0.89
TRAPPC11-204ENST00000505676 ITPK1Q13572 414 aa20.62■□□□□ 0.89
TRAPPC11-204ENST00000505676 TTF1Q15361 905 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC11-204ENST00000505676 ADCK5Q3MIX3 580 aa20.62■□□□□ 0.89
TRAPPC11-204ENST00000505676 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
TRAPPC11-204ENST00000505676 GOLGA6L3A6NEY3 463 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 UQCRFS1P1P0C7P4 283 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 SMC3Q9UQE7 1217 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 ATP6V1DQ9Y5K8 247 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 PDE8BO95263 885 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 CCDC152Q4G0S7 254 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 NOL8Q76FK4 1167 aaKnown RBP20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 VGLL2Q8N8G2 317 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 CHMP4CQ96CF2 233 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 C8orf37Q96NL8 207 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.61■□□□□ 0.893e-8■■■■■ 43.3
TRAPPC11-204ENST00000505676 THSD7AQ9UPZ6 1657 aa20.61■□□□□ 0.89
TRAPPC11-204ENST00000505676 A0A0G2JS52 829 aa20.6■□□□□ 0.89
TRAPPC11-204ENST00000505676 FSD2A1L4K1 749 aa20.6■□□□□ 0.89
TRAPPC11-204ENST00000505676 FAM98CQ17RN3 349 aaKnown RBP20.6■□□□□ 0.89
TRAPPC11-204ENST00000505676 RC3H1Q5TC82 1133 aaKnown RBP20.6■□□□□ 0.89
TRAPPC11-204ENST00000505676 MCTP1Q6DN14 999 aa20.6■□□□□ 0.89
TRAPPC11-204ENST00000505676 PKP1Q13835 747 aa20.59■□□□□ 0.89
TRAPPC11-204ENST00000505676 PUM3Q15397 648 aaKnown RBP20.59■□□□□ 0.89
TRAPPC11-204ENST00000505676 SUSD4Q5VX71 490 aa20.59■□□□□ 0.89
TRAPPC11-204ENST00000505676 LPIN2Q92539 896 aa20.59■□□□□ 0.89
TRAPPC11-204ENST00000505676 NEK1Q96PY6 1258 aa20.59■□□□□ 0.89
TRAPPC11-204ENST00000505676 CTNNA3Q9UI47 895 aa20.59■□□□□ 0.89
TRAPPC11-204ENST00000505676 ARAP2Q8WZ64 1704 aa20.59■□□□□ 0.89
TRAPPC11-204ENST00000505676 DDX49Q9Y6V7 483 aaKnown RBP20.58■□□□□ 0.89
TRAPPC11-204ENST00000505676 MBD3O95983 291 aa20.58■□□□□ 0.88
TRAPPC11-204ENST00000505676 LMBRD1Q9NUN5 540 aa20.58■□□□□ 0.88
TRAPPC11-204ENST00000505676 PDCP20941 246 aa20.57■□□□□ 0.88
TRAPPC11-204ENST00000505676 APPBP2Q92624 585 aa20.57■□□□□ 0.88
TRAPPC11-204ENST00000505676 NHSQ6T4R5 1651 aa20.57■□□□□ 0.88
TRAPPC11-204ENST00000505676 NTSR2O95665 410 aa20.57■□□□□ 0.88
TRAPPC11-204ENST00000505676 ARID4AP29374 1257 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC11-204ENST00000505676 FKBP4Q02790 459 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRAPPC11-204ENST00000505676 NIP7Q9Y221 180 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRAPPC11-204ENST00000505676 SLC5A1P13866 664 aa20.56■□□□□ 0.88
TRAPPC11-204ENST00000505676 ADORA1P30542 326 aa20.56■□□□□ 0.88
TRAPPC11-204ENST00000505676 SYNE4Q8N205 404 aa20.56■□□□□ 0.88
TRAPPC11-204ENST00000505676 CCDC85AQ96PX6 553 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC11-204ENST00000505676 USP21Q9UK80 565 aa20.56■□□□□ 0.88
TRAPPC11-204ENST00000505676 MYH14Q7Z406 1995 aaKnown RBP20.56■□□□□ 0.88
TRAPPC11-204ENST00000505676 MAST3O60307 1309 aa20.56■□□□□ 0.88
TRAPPC11-204ENST00000505676 ATRNO75882 1429 aa20.55■□□□□ 0.88
TRAPPC11-204ENST00000505676 NDUFB9Q9Y6M9 179 aa20.55■□□□□ 0.88
TRAPPC11-204ENST00000505676 FGFR2P21802 821 aa20.55■□□□□ 0.88
TRAPPC11-204ENST00000505676 IGHMBP2P38935 993 aaKnown RBP20.55■□□□□ 0.88
TRAPPC11-204ENST00000505676 MRE11P49959 708 aa20.55■□□□□ 0.88
TRAPPC11-204ENST00000505676 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
TRAPPC11-204ENST00000505676 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
TRAPPC11-204ENST00000505676 STX6O43752 255 aa20.54■□□□□ 0.88
TRAPPC11-204ENST00000505676 ZSCAN22P10073 491 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC11-204ENST00000505676 DDX60Q8IY21 1712 aaKnown RBP20.54■□□□□ 0.88
TRAPPC11-204ENST00000505676 CYP21A2P08686 494 aa20.54■□□□□ 0.88
TRAPPC11-204ENST00000505676 HSPD1P10809 573 aaKnown RBP20.54■□□□□ 0.88
TRAPPC11-204ENST00000505676 CSPP1Q1MSJ5 1256 aa20.54■□□□□ 0.88
TRAPPC11-204ENST00000505676 SEC62Q99442 399 aaKnown RBP20.54■□□□□ 0.88
TRAPPC11-204ENST00000505676 CDC5LQ99459 802 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms