RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 RUNDC1Q96C34 613 aa20.87■□□□□ 0.93
PDLIM7-213ENST00000505074 BABAM1Q9NWV8 329 aa20.87■□□□□ 0.93
PDLIM7-213ENST00000505074 ECE2O60344 883 aa20.86■□□□□ 0.93
PDLIM7-213ENST00000505074 AIMP1Q12904 312 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-213ENST00000505074 PDIA6Q15084 440 aa20.86■□□□□ 0.93
PDLIM7-213ENST00000505074 EYA3Q99504 573 aa20.86■□□□□ 0.93
PDLIM7-213ENST00000505074 PAPPA2Q9BXP8 1791 aa20.85■□□□□ 0.93
PDLIM7-213ENST00000505074 FKBP1BP68106 108 aa20.85■□□□□ 0.93
PDLIM7-213ENST00000505074 PROSER3Q2NL68 480 aa20.85■□□□□ 0.93
PDLIM7-213ENST00000505074 ZNF296Q8WUU4 475 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-213ENST00000505074 KCNQ5Q9NR82 932 aa20.85■□□□□ 0.93
PDLIM7-213ENST00000505074 RTL9Q8NET4 1388 aa20.85■□□□□ 0.93
PDLIM7-213ENST00000505074 DOK7Q18PE1 504 aa20.84■□□□□ 0.93
PDLIM7-213ENST00000505074 SCN9AQ15858 1988 aa20.83■□□□□ 0.93
PDLIM7-213ENST00000505074 TBC1D8O95759 1140 aa20.83■□□□□ 0.93
PDLIM7-213ENST00000505074 TCIRG1Q13488 830 aa20.83■□□□□ 0.93
PDLIM7-213ENST00000505074 COPS6Q7L5N1 327 aa20.83■□□□□ 0.93
PDLIM7-213ENST00000505074 POLLQ9UGP5 575 aa20.83■□□□□ 0.93
PDLIM7-213ENST00000505074 ADAMTS8Q9UP79 889 aa20.83■□□□□ 0.93
PDLIM7-213ENST00000505074 ASTN2O75129 1339 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-213ENST00000505074 VIL1P09327 827 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-213ENST00000505074 GPSM2P81274 684 aa20.82■□□□□ 0.92
PDLIM7-213ENST00000505074 KRT24Q2M2I5 525 aa20.82■□□□□ 0.92
PDLIM7-213ENST00000505074 FBXO46Q6PJ61 603 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-213ENST00000505074 XAGE3Q8WTP9 111 aa20.82■□□□□ 0.92
PDLIM7-213ENST00000505074 G3V3G9 751 aa20.81■□□□□ 0.92
PDLIM7-213ENST00000505074 DCAF8Q5TAQ9 597 aa20.81■□□□□ 0.92
PDLIM7-213ENST00000505074 ANGEL2Q5VTE6 544 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-213ENST00000505074 CELF1Q92879 486 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-213ENST00000505074 ZC3H12CQ9C0D7 883 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-213ENST00000505074 TRIM35Q9UPQ4 493 aa20.81■□□□□ 0.92
PDLIM7-213ENST00000505074 SCARF1Q14162 830 aa20.8■□□□□ 0.92
PDLIM7-213ENST00000505074 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-213ENST00000505074 PSME4Q14997 1843 aa20.79■□□□□ 0.92
PDLIM7-213ENST00000505074 GPR25O00155 361 aa20.79■□□□□ 0.92
PDLIM7-213ENST00000505074 CHL1O00533 1208 aa20.79■□□□□ 0.92
PDLIM7-213ENST00000505074 HABP4Q5JVS0 413 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-213ENST00000505074 HDGFL1Q5TGJ6 251 aa20.79■□□□□ 0.92
PDLIM7-213ENST00000505074 TBC1D16Q8TBP0 767 aa20.79■□□□□ 0.92
PDLIM7-213ENST00000505074 PRKRIP1Q9H875 184 aaPredicted RBP20.79■□□□□ 0.92
PDLIM7-213ENST00000505074 CHPF2Q9P2E5 772 aa20.79■□□□□ 0.92
PDLIM7-213ENST00000505074 ZNF280AP59817 542 aaPredicted RBP20.78■□□□□ 0.92
PDLIM7-213ENST00000505074 SF3B3Q15393 1217 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-213ENST00000505074 TM4SF4P48230 202 aa20.77■□□□□ 0.92
PDLIM7-213ENST00000505074 AGBL3Q8NEM8 1001 aa20.77■□□□□ 0.92
PDLIM7-213ENST00000505074 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
PDLIM7-213ENST00000505074 PITPNM2Q9BZ72 1349 aa20.77■□□□□ 0.91
PDLIM7-213ENST00000505074 UBE2Q2LH0YL09 131 aa20.76■□□□□ 0.91
PDLIM7-213ENST00000505074 MOB2Q70IA6 237 aa20.76■□□□□ 0.91
PDLIM7-213ENST00000505074 ZNF609O15014 1411 aa20.76■□□□□ 0.91
PDLIM7-213ENST00000505074 FKTNO75072 461 aa20.75■□□□□ 0.91
PDLIM7-213ENST00000505074 RSBN1LQ6PCB5 846 aaPredicted RBP20.75■□□□□ 0.91
PDLIM7-213ENST00000505074 FAM89AQ96GI7 184 aa20.75■□□□□ 0.91
PDLIM7-213ENST00000505074 COL4A1P02462 1669 aa20.74■□□□□ 0.91
PDLIM7-213ENST00000505074 RPS8P62241 208 aaKnown RBP20.74■□□□□ 0.91
PDLIM7-213ENST00000505074 SREBF2Q12772 1141 aa20.74■□□□□ 0.91
PDLIM7-213ENST00000505074 TTLL12Q14166 644 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-213ENST00000505074 MYOZ2Q9NPC6 264 aa20.74■□□□□ 0.91
PDLIM7-213ENST00000505074 USP17L8P0C7I0 530 aa20.73■□□□□ 0.91
PDLIM7-213ENST00000505074 PODXL2Q9NZ53 605 aa20.73■□□□□ 0.91
PDLIM7-213ENST00000505074 APAF1O14727 1248 aa20.72■□□□□ 0.91
PDLIM7-213ENST00000505074 UFL1O94874 794 aa20.72■□□□□ 0.91
PDLIM7-213ENST00000505074 HOXB7P09629 217 aa20.72■□□□□ 0.91
PDLIM7-213ENST00000505074 DUSP27Q5VZP5 1158 aa20.72■□□□□ 0.91
PDLIM7-213ENST00000505074 CFHR5Q9BXR6 569 aa20.72■□□□□ 0.91
PDLIM7-213ENST00000505074 MBIPQ9NS73 344 aa20.72■□□□□ 0.91
PDLIM7-213ENST00000505074 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
PDLIM7-213ENST00000505074 DBF4Q9UBU7 674 aaPredicted RBP20.72■□□□□ 0.91
PDLIM7-213ENST00000505074 NF2P35240 595 aa20.71■□□□□ 0.91
PDLIM7-213ENST00000505074 PLBD2Q8NHP8 589 aa20.71■□□□□ 0.91
PDLIM7-213ENST00000505074 GGA1Q9UJY5 639 aa20.71■□□□□ 0.91
PDLIM7-213ENST00000505074 SCAF8Q9UPN6 1271 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-213ENST00000505074 CALD1Q05682 793 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-213ENST00000505074 MKRN3Q13064 507 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-213ENST00000505074 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
PDLIM7-213ENST00000505074 INTS3Q68E01 1043 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-213ENST00000505074 ANKRD13DQ6ZTN6 518 aa20.7■□□□□ 0.9
PDLIM7-213ENST00000505074 ISCA1Q9BUE6 129 aa20.7■□□□□ 0.9
PDLIM7-213ENST00000505074 HYPKQ9NX55 129 aa20.7■□□□□ 0.9
PDLIM7-213ENST00000505074 RBBP6Q7Z6E9 1792 aaKnown RBP20.69■□□□□ 0.9
PDLIM7-213ENST00000505074 ATP5J2-PTCD1G3V325 749 aa20.69■□□□□ 0.9
PDLIM7-213ENST00000505074 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
PDLIM7-213ENST00000505074 PRAMEF18Q5VWM3 479 aa20.69■□□□□ 0.9
PDLIM7-213ENST00000505074 GMLQ99445 158 aa20.69■□□□□ 0.9
PDLIM7-213ENST00000505074 ELL2O00472 640 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-213ENST00000505074 GNAI1P63096 354 aa20.68■□□□□ 0.9
PDLIM7-213ENST00000505074 USP17L3A6NCW0 530 aa20.67■□□□□ 0.9
PDLIM7-213ENST00000505074 USP17L4A6NCW7 530 aa20.67■□□□□ 0.9
PDLIM7-213ENST00000505074 ALDH1A1P00352 501 aa20.67■□□□□ 0.9
PDLIM7-213ENST00000505074 USP17L1Q7RTZ2 530 aa20.67■□□□□ 0.9
PDLIM7-213ENST00000505074 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
PDLIM7-213ENST00000505074 POTEFA5A3E0 1075 aa20.66■□□□□ 0.9
PDLIM7-213ENST00000505074 GOLGA2Q08379 1002 aa20.66■□□□□ 0.9
PDLIM7-213ENST00000505074 NBPF9Q3BBW0 867 aa20.66■□□□□ 0.9
PDLIM7-213ENST00000505074 ARMC9Q7Z3E5 817 aa20.66■□□□□ 0.9
PDLIM7-213ENST00000505074 RIC3Q7Z5B4 369 aa20.66■□□□□ 0.9
PDLIM7-213ENST00000505074 R3HDMLQ9H3Y0 253 aa20.66■□□□□ 0.9
PDLIM7-213ENST00000505074 TRIM17Q9Y577 477 aa20.66■□□□□ 0.9
PDLIM7-213ENST00000505074 HSP90B1P14625 803 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-213ENST00000505074 PODNQ7Z5L7 613 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms