RNA–Protein interactions for RNA: ENST00000504411.1

TGFBI-204, Transcript of transforming growth factor beta induced, humanhuman

TSL 2

Gene TGFBI, Length 1,033 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBI-204ENST00000504411 SLC10A5Q5PT55 438 aa11.3□□□□□ -0.6
TGFBI-204ENST00000504411 CWC27Q6UX04 472 aaKnown RBP11.3□□□□□ -0.6
TGFBI-204ENST00000504411 VGLL2Q8N8G2 317 aa11.3□□□□□ -0.6
TGFBI-204ENST00000504411 SETDB2Q96T68 719 aa11.3□□□□□ -0.6
TGFBI-204ENST00000504411 CDC5LQ99459 802 aaKnown RBP11.3□□□□□ -0.6
TGFBI-204ENST00000504411 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 ST18O60284 1047 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 SSFA2P28290 1259 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 RFC4P35249 363 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
TGFBI-204ENST00000504411 SF3B3Q15393 1217 aaKnown RBP11.29□□□□□ -0.6
TGFBI-204ENST00000504411 LRRFIP1Q32MZ4 808 aaKnown RBP11.29□□□□□ -0.6
TGFBI-204ENST00000504411 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 TBC1D9BQ66K14 1250 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
TGFBI-204ENST00000504411 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 ZNF512BQ96KM6 892 aaPredicted RBP11.29□□□□□ -0.6
TGFBI-204ENST00000504411 DNAJC2Q99543 621 aaKnown RBP11.29□□□□□ -0.6
TGFBI-204ENST00000504411 LSG1Q9H089 658 aaKnown RBP11.29□□□□□ -0.6
TGFBI-204ENST00000504411 SRP68Q9UHB9 627 aaKnown RBP11.29□□□□□ -0.6
TGFBI-204ENST00000504411 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
TGFBI-204ENST00000504411 COL4A1P02462 1669 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 TRIM37O94972 964 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 PDE8BO95263 885 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 IFIT1P09914 478 aaKnown RBP11.28□□□□□ -0.6
TGFBI-204ENST00000504411 HSPA4P34932 840 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 TIMM10P62072 90 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 NMIQ13287 307 aaPredicted RBP11.28□□□□□ -0.6
TGFBI-204ENST00000504411 PUM3Q15397 648 aaKnown RBP11.28□□□□□ -0.6
TGFBI-204ENST00000504411 ERFEQ4G0M1 354 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 TTC39AQ5SRH9 613 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 NBPF5PQ86XG9 351 aaPredicted RBP11.28□□□□□ -0.6
TGFBI-204ENST00000504411 KBTBD3Q8NAB2 608 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 IL25Q9H293 177 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 PAG1Q9NWQ8 432 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 CHD4Q14839 1912 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
TGFBI-204ENST00000504411 MAST2Q6P0Q8 1798 aa11.27□□□□□ -0.61
TGFBI-204ENST00000504411 K7ELQ4 463 aaPredicted RBP11.27□□□□□ -0.61
TGFBI-204ENST00000504411 SLC5A1P13866 664 aa11.27□□□□□ -0.61
TGFBI-204ENST00000504411 RXRBP28702 533 aa11.27□□□□□ -0.61
TGFBI-204ENST00000504411 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
TGFBI-204ENST00000504411 MCM2P49736 904 aa11.27□□□□□ -0.61
TGFBI-204ENST00000504411 TPTE2Q6XPS3 522 aa11.27□□□□□ -0.61
TGFBI-204ENST00000504411 LPIN2Q92539 896 aa11.27□□□□□ -0.61
TGFBI-204ENST00000504411 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
TGFBI-204ENST00000504411 CCDC88AQ3V6T2 1871 aa11.27□□□□□ -0.61
TGFBI-204ENST00000504411 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 ANKRD31Q8N7Z5 1873 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 A0A0D9SFI3 127 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 PHF14O94880 888 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 UQCRFS1P1P0C7P4 283 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 FGFR2P21802 821 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 ADORA1P30542 326 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 BICDL1Q6ZP65 573 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 FAM227BQ96M60 508 aa11.26□□□□□ -0.61
TGFBI-204ENST00000504411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
TGFBI-204ENST00000504411 GOLIM4O00461 696 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 PLSCR1O15162 318 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 ARID4AP29374 1257 aaPredicted RBP11.25□□□□□ -0.61
TGFBI-204ENST00000504411 TXNRD1Q16881 649 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
TGFBI-204ENST00000504411 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 KCNB2Q92953 911 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 NLRP3Q96P20 1036 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 SEC31BQ9NQW1 1179 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 HELLSQ9NRZ9 838 aa11.25□□□□□ -0.61
TGFBI-204ENST00000504411 ZFYP08048 801 aaPredicted RBP11.24□□□□□ -0.61
TGFBI-204ENST00000504411 KCNA4P22459 653 aa11.24□□□□□ -0.61
TGFBI-204ENST00000504411 TTF1Q15361 905 aaPredicted RBP11.24□□□□□ -0.61
TGFBI-204ENST00000504411 MCMDC2Q4G0Z9 681 aa11.24□□□□□ -0.61
TGFBI-204ENST00000504411 EDC3Q96F86 508 aaKnown RBP11.24□□□□□ -0.61
TGFBI-204ENST00000504411 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
TGFBI-204ENST00000504411 BSDC1Q9NW68 430 aaPredicted RBP11.24□□□□□ -0.61
TGFBI-204ENST00000504411 HMG20BQ9P0W2 317 aa11.24□□□□□ -0.61
TGFBI-204ENST00000504411 PALD1Q9ULE6 856 aa11.24□□□□□ -0.61
TGFBI-204ENST00000504411 DUOX1Q9NRD9 1551 aa11.24□□□□□ -0.61
TGFBI-204ENST00000504411 RNF113AO15541 343 aaKnown RBP11.23□□□□□ -0.61
TGFBI-204ENST00000504411 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
TGFBI-204ENST00000504411 NFIXQ14938 502 aa11.23□□□□□ -0.61
TGFBI-204ENST00000504411 ZMYM1Q5SVZ6 1142 aa11.23□□□□□ -0.61
TGFBI-204ENST00000504411 RNF20Q5VTR2 975 aa11.23□□□□□ -0.61
TGFBI-204ENST00000504411 SMIM5Q71RC9 77 aa11.23□□□□□ -0.61
TGFBI-204ENST00000504411 CNBD1Q8NA66 436 aa11.23□□□□□ -0.61
TGFBI-204ENST00000504411 FBXO41Q8TF61 875 aa11.23□□□□□ -0.61
TGFBI-204ENST00000504411 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
TGFBI-204ENST00000504411 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.61
TGFBI-204ENST00000504411 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
TGFBI-204ENST00000504411 RBM8AQ9Y5S9 174 aaKnown RBP11.23□□□□□ -0.61
TGFBI-204ENST00000504411 SNX14Q9Y5W7 946 aa11.23□□□□□ -0.61
TGFBI-204ENST00000504411 NPHP1O15259 732 aa11.22□□□□□ -0.61
TGFBI-204ENST00000504411 TAF5LO75529 589 aa11.22□□□□□ -0.61
TGFBI-204ENST00000504411 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
TGFBI-204ENST00000504411 GYS1P13807 737 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms