RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 TRMT2AQ8IZ69 625 aaKnown RBP17.41■□□□□ 0.38
HOXC6-203ENST00000504315 KLRG1Q96E93 195 aa17.41■□□□□ 0.38
HOXC6-203ENST00000504315 BSDC1Q9NW68 430 aaPredicted RBP17.41■□□□□ 0.38
HOXC6-203ENST00000504315 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
HOXC6-203ENST00000504315 TNIP1Q15025 636 aa17.4■□□□□ 0.38
HOXC6-203ENST00000504315 USP50Q70EL3 339 aaPredicted RBP17.4■□□□□ 0.38
HOXC6-203ENST00000504315 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
HOXC6-203ENST00000504315 XDHP47989 1333 aa17.4■□□□□ 0.38
HOXC6-203ENST00000504315 ZNF609O15014 1411 aa17.39■□□□□ 0.38
HOXC6-203ENST00000504315 RAD17O75943 681 aa17.39■□□□□ 0.37
HOXC6-203ENST00000504315 UFL1O94874 794 aa17.39■□□□□ 0.37
HOXC6-203ENST00000504315 JMYQ8N9B5 988 aa17.39■□□□□ 0.37
HOXC6-203ENST00000504315 DBNDD1Q9H9R9 158 aa17.39■□□□□ 0.37
HOXC6-203ENST00000504315 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
HOXC6-203ENST00000504315 ANKIB1Q9P2G1 1089 aa17.39■□□□□ 0.37
HOXC6-203ENST00000504315 ALDH1L1O75891 902 aa17.38■□□□□ 0.37
HOXC6-203ENST00000504315 GMPSP49915 693 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-203ENST00000504315 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
HOXC6-203ENST00000504315 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
HOXC6-203ENST00000504315 ADARB2Q9NS39 739 aaKnown RBP17.38■□□□□ 0.37
HOXC6-203ENST00000504315 GRM8O00222 908 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 RIMBP2O15034 1052 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 ECE2O60344 883 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 ITGA6P23229 1130 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 ATP2B4P23634 1241 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 DPF2Q92785 391 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 CDCA7LQ96GN5 454 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 GPR101Q96P66 508 aaPredicted RBP17.37■□□□□ 0.37
HOXC6-203ENST00000504315 ZC3H12CQ9C0D7 883 aaKnown RBP17.37■□□□□ 0.37
HOXC6-203ENST00000504315 MINPP1Q9UNW1 487 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 PTPRCP08575 1304 aa17.37■□□□□ 0.37
HOXC6-203ENST00000504315 PSMD14O00487 310 aa17.36■□□□□ 0.37
HOXC6-203ENST00000504315 IGHMBP2P38935 993 aaKnown RBP17.36■□□□□ 0.37
HOXC6-203ENST00000504315 FOXO4P98177 505 aa17.36■□□□□ 0.37
HOXC6-203ENST00000504315 MAP1SQ66K74 1059 aaPredicted RBP17.36■□□□□ 0.37
HOXC6-203ENST00000504315 CNTROBQ8N137 903 aa17.36■□□□□ 0.37
HOXC6-203ENST00000504315 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
HOXC6-203ENST00000504315 PCNTO95613 3336 aa17.36■□□□□ 0.37
HOXC6-203ENST00000504315 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
HOXC6-203ENST00000504315 CT47B1P0C2W7 299 aaPredicted RBP17.35■□□□□ 0.37
HOXC6-203ENST00000504315 RPS12P25398 132 aaKnown RBP17.35■□□□□ 0.37
HOXC6-203ENST00000504315 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
HOXC6-203ENST00000504315 BCL2L13Q9BXK5 485 aa17.35■□□□□ 0.37
HOXC6-203ENST00000504315 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
HOXC6-203ENST00000504315 UTYO14607 1347 aa17.35■□□□□ 0.37
HOXC6-203ENST00000504315 DOK7Q18PE1 504 aa17.34■□□□□ 0.37
HOXC6-203ENST00000504315 PGAP2Q9UHJ9 254 aa17.34■□□□□ 0.37
HOXC6-203ENST00000504315 VIL1P09327 827 aaKnown RBP17.33■□□□□ 0.36
HOXC6-203ENST00000504315 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
HOXC6-203ENST00000504315 EPHA10Q5JZY3 1008 aa17.33■□□□□ 0.36
HOXC6-203ENST00000504315 SLC4A10Q6U841 1118 aa17.33■□□□□ 0.36
HOXC6-203ENST00000504315 ZC3H15Q8WU90 426 aaKnown RBP17.33■□□□□ 0.36
HOXC6-203ENST00000504315 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
HOXC6-203ENST00000504315 KCNQ5Q9NR82 932 aa17.33■□□□□ 0.36
HOXC6-203ENST00000504315 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
HOXC6-203ENST00000504315 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
HOXC6-203ENST00000504315 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
HOXC6-203ENST00000504315 TMEM88BA6NKF7 163 aa17.32■□□□□ 0.36
HOXC6-203ENST00000504315 HIRAP54198 1017 aaPredicted RBP17.32■□□□□ 0.36
HOXC6-203ENST00000504315 IFIT5Q13325 482 aaKnown RBP17.32■□□□□ 0.36
HOXC6-203ENST00000504315 PODNQ7Z5L7 613 aa17.32■□□□□ 0.36
HOXC6-203ENST00000504315 MICALL2Q8IY33 904 aa17.32■□□□□ 0.36
HOXC6-203ENST00000504315 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
HOXC6-203ENST00000504315 LEMD3Q9Y2U8 911 aa17.32■□□□□ 0.36
HOXC6-203ENST00000504315 CNTNAP1P78357 1384 aa17.31■□□□□ 0.36
HOXC6-203ENST00000504315 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
HOXC6-203ENST00000504315 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-203ENST00000504315 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-203ENST00000504315 TRPM4Q8TD43 1214 aa17.31■□□□□ 0.36
HOXC6-203ENST00000504315 KAZALD1Q96I82 304 aa17.31■□□□□ 0.36
HOXC6-203ENST00000504315 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
HOXC6-203ENST00000504315 ECM29Q5VYK3 1845 aa17.31■□□□□ 0.36
HOXC6-203ENST00000504315 THSD7BQ9C0I4 1608 aa17.3■□□□□ 0.36
HOXC6-203ENST00000504315 H7C1D1 291 aa17.3■□□□□ 0.36
HOXC6-203ENST00000504315 CHRNDQ07001 517 aa17.3■□□□□ 0.36
HOXC6-203ENST00000504315 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
HOXC6-203ENST00000504315 LMBR1LQ6UX01 489 aa17.3■□□□□ 0.36
HOXC6-203ENST00000504315 IRS2Q9Y4H2 1338 aa17.29■□□□□ 0.36
HOXC6-203ENST00000504315 G3V3G9 751 aa17.29■□□□□ 0.36
HOXC6-203ENST00000504315 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
HOXC6-203ENST00000504315 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
HOXC6-203ENST00000504315 AGBL3Q8NEM8 1001 aa17.29■□□□□ 0.36
HOXC6-203ENST00000504315 SUCLG2Q96I99 432 aa17.29■□□□□ 0.36
HOXC6-203ENST00000504315 GMLQ99445 158 aa17.29■□□□□ 0.36
HOXC6-203ENST00000504315 ZNF804BA4D1E1 1349 aa17.28■□□□□ 0.36
HOXC6-203ENST00000504315 ARAP2Q8WZ64 1704 aa17.28■□□□□ 0.36
HOXC6-203ENST00000504315 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
HOXC6-203ENST00000504315 RSBN1LQ6PCB5 846 aaPredicted RBP17.28■□□□□ 0.36
HOXC6-203ENST00000504315 C15orf52Q6ZUT6 534 aaKnown RBP17.28■□□□□ 0.36
HOXC6-203ENST00000504315 TXNRD3Q86VQ6 643 aa17.28■□□□□ 0.36
HOXC6-203ENST00000504315 MIER1Q8N108 512 aa17.28■□□□□ 0.36
HOXC6-203ENST00000504315 COA1Q9GZY4 146 aa17.28■□□□□ 0.36
HOXC6-203ENST00000504315 RASSF10A6NK89 507 aa17.27■□□□□ 0.36
HOXC6-203ENST00000504315 EGFRP00533 1210 aa17.27■□□□□ 0.36
HOXC6-203ENST00000504315 ZNF280AP59817 542 aaPredicted RBP17.27■□□□□ 0.36
HOXC6-203ENST00000504315 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
HOXC6-203ENST00000504315 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.36
HOXC6-203ENST00000504315 SMC4Q9NTJ3 1288 aa17.27■□□□□ 0.36
HOXC6-203ENST00000504315 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms