RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 NPHP1O15259 732 aa16.54■□□□□ 0.24
PRDM2-213ENST00000503842 PTPN12Q05209 780 aaKnown RBP16.54■□□□□ 0.24
PRDM2-213ENST00000503842 CCDC152Q4G0S7 254 aa16.54■□□□□ 0.24
PRDM2-213ENST00000503842 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
PRDM2-213ENST00000503842 NLRP3Q96P20 1036 aa16.54■□□□□ 0.24
PRDM2-213ENST00000503842 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
PRDM2-213ENST00000503842 MTFR1LQ9H019 292 aa16.54■□□□□ 0.24
PRDM2-213ENST00000503842 PA2G4Q9UQ80 394 aaKnown RBP16.54■□□□□ 0.24
PRDM2-213ENST00000503842 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
PRDM2-213ENST00000503842 KLRG2A4D1S0 409 aaPredicted RBP16.53■□□□□ 0.24
PRDM2-213ENST00000503842 SURF6O75683 361 aaKnown RBP16.53■□□□□ 0.24
PRDM2-213ENST00000503842 ITGA6P23229 1130 aa16.53■□□□□ 0.24
PRDM2-213ENST00000503842 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
PRDM2-213ENST00000503842 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
PRDM2-213ENST00000503842 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
PRDM2-213ENST00000503842 EXOC6BQ9Y2D4 811 aa16.53■□□□□ 0.24
PRDM2-213ENST00000503842 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.24
PRDM2-213ENST00000503842 PSDA5PKW4 1024 aaPredicted RBP16.52■□□□□ 0.24
PRDM2-213ENST00000503842 ZBTB7AO95365 584 aa16.52■□□□□ 0.24
PRDM2-213ENST00000503842 DCBLD2Q96PD2 775 aa16.52■□□□□ 0.24
PRDM2-213ENST00000503842 TMEM106CQ9BVX2 250 aa16.52■□□□□ 0.24
PRDM2-213ENST00000503842 BRIP1Q9BX63 1249 aa16.52■□□□□ 0.24
PRDM2-213ENST00000503842 LRP5O75197 1615 aa16.52■□□□□ 0.23
PRDM2-213ENST00000503842 RAB11FIP3O75154 756 aa16.51■□□□□ 0.23
PRDM2-213ENST00000503842 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
PRDM2-213ENST00000503842 HSP90AB4PQ58FF6 505 aa16.51■□□□□ 0.23
PRDM2-213ENST00000503842 TRPC6Q9Y210 931 aa16.51■□□□□ 0.23
PRDM2-213ENST00000503842 NUCB1Q02818 461 aa16.5■□□□□ 0.23
PRDM2-213ENST00000503842 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
PRDM2-213ENST00000503842 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
PRDM2-213ENST00000503842 PDZRN3Q9UPQ7 1066 aa16.5■□□□□ 0.23
PRDM2-213ENST00000503842 EYA2O00167 538 aa16.49■□□□□ 0.23
PRDM2-213ENST00000503842 CIAO1O76071 339 aa16.49■□□□□ 0.23
PRDM2-213ENST00000503842 G3BP1Q13283 466 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRDM2-213ENST00000503842 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
PRDM2-213ENST00000503842 C10orf71Q711Q0 1435 aa16.49■□□□□ 0.23
PRDM2-213ENST00000503842 SIL1Q9H173 461 aa16.49■□□□□ 0.23
PRDM2-213ENST00000503842 STK24Q9Y6E0 443 aa16.49■□□□□ 0.23
PRDM2-213ENST00000503842 COL4A1P02462 1669 aa16.49■□□□□ 0.23
PRDM2-213ENST00000503842 HOXA10P31260 410 aaPredicted RBP16.48■□□□□ 0.23
PRDM2-213ENST00000503842 ANKRD45Q5TZF3 282 aa16.48■□□□□ 0.23
PRDM2-213ENST00000503842 ATG9AQ7Z3C6 839 aa16.48■□□□□ 0.23
PRDM2-213ENST00000503842 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
PRDM2-213ENST00000503842 CDC5LQ99459 802 aaKnown RBP16.48■□□□□ 0.23
PRDM2-213ENST00000503842 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
PRDM2-213ENST00000503842 SASH1O94885 1247 aa16.47■□□□□ 0.23
PRDM2-213ENST00000503842 TIE1P35590 1138 aa16.47■□□□□ 0.23
PRDM2-213ENST00000503842 PDE6BP35913 854 aa16.47■□□□□ 0.23
PRDM2-213ENST00000503842 IL15P40933 162 aaPredicted RBP16.47■□□□□ 0.23
PRDM2-213ENST00000503842 OS9Q13438 667 aaPredicted RBP16.47■□□□□ 0.23
PRDM2-213ENST00000503842 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
PRDM2-213ENST00000503842 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
PRDM2-213ENST00000503842 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
PRDM2-213ENST00000503842 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
PRDM2-213ENST00000503842 LRRCC1Q9C099 1032 aa16.47■□□□□ 0.23
PRDM2-213ENST00000503842 TAF1P21675 1872 aa16.46■□□□□ 0.23
PRDM2-213ENST00000503842 COL11A2P13942 1736 aaPredicted RBP16.46■□□□□ 0.23
PRDM2-213ENST00000503842 APBB1O00213 710 aa16.46■□□□□ 0.23
PRDM2-213ENST00000503842 SMARCA5O60264 1052 aaPredicted RBP16.46■□□□□ 0.23
PRDM2-213ENST00000503842 POLD1P28340 1107 aa16.46■□□□□ 0.23
PRDM2-213ENST00000503842 DDX46Q7L014 1031 aaKnown RBP16.46■□□□□ 0.23
PRDM2-213ENST00000503842 CELF1Q92879 486 aaKnown RBP16.46■□□□□ 0.23
PRDM2-213ENST00000503842 RIPOR2Q9Y4F9 1068 aa16.46■□□□□ 0.23
PRDM2-213ENST00000503842 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
PRDM2-213ENST00000503842 SRGNP10124 158 aa16.45■□□□□ 0.22
PRDM2-213ENST00000503842 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
PRDM2-213ENST00000503842 PTGER2P43116 358 aa16.45■□□□□ 0.22
PRDM2-213ENST00000503842 GRAPQ13588 217 aa16.45■□□□□ 0.22
PRDM2-213ENST00000503842 LDHAL6AQ6ZMR3 332 aa16.45■□□□□ 0.22
PRDM2-213ENST00000503842 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
PRDM2-213ENST00000503842 GRAPLQ8TC17 118 aaPredicted RBP16.45■□□□□ 0.22
PRDM2-213ENST00000503842 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
PRDM2-213ENST00000503842 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
PRDM2-213ENST00000503842 LNPKQ9C0E8 428 aa16.45■□□□□ 0.22
PRDM2-213ENST00000503842 NPR1P16066 1061 aa16.44■□□□□ 0.22
PRDM2-213ENST00000503842 PDE4AP27815 886 aa16.44■□□□□ 0.22
PRDM2-213ENST00000503842 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
PRDM2-213ENST00000503842 CRAMP1Q96RY5 1269 aa16.44■□□□□ 0.22
PRDM2-213ENST00000503842 MPHOSPH8Q99549 860 aa16.44■□□□□ 0.22
PRDM2-213ENST00000503842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.44■□□□□ 0.22
PRDM2-213ENST00000503842 SPEF2Q9C093 1822 aa16.43■□□□□ 0.22
PRDM2-213ENST00000503842 TFCP2Q12800 502 aa16.43■□□□□ 0.22
PRDM2-213ENST00000503842 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
PRDM2-213ENST00000503842 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
PRDM2-213ENST00000503842 IL1RAPL2Q9NP60 686 aa16.43■□□□□ 0.22
PRDM2-213ENST00000503842 CNNM1Q9NRU3 951 aa16.43■□□□□ 0.22
PRDM2-213ENST00000503842 BMP2KQ9NSY1 1161 aaPredicted RBP16.43■□□□□ 0.22
PRDM2-213ENST00000503842 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
PRDM2-213ENST00000503842 TTLL13PA6NNM8 815 aa16.42■□□□□ 0.22
PRDM2-213ENST00000503842 SOCS7O14512 581 aa16.42■□□□□ 0.22
PRDM2-213ENST00000503842 HS6ST3Q8IZP7 471 aa16.42■□□□□ 0.22
PRDM2-213ENST00000503842 VGLL2Q8N8G2 317 aa16.42■□□□□ 0.22
PRDM2-213ENST00000503842 MASTLQ96GX5 879 aa16.42■□□□□ 0.22
PRDM2-213ENST00000503842 GPR108Q9NPR9 543 aa16.42■□□□□ 0.22
PRDM2-213ENST00000503842 MROH5Q6ZUA9 1318 aa16.42■□□□□ 0.22
PRDM2-213ENST00000503842 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
PRDM2-213ENST00000503842 STYK1Q6J9G0 422 aa16.41■□□□□ 0.22
PRDM2-213ENST00000503842 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
PRDM2-213ENST00000503842 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
PRDM2-213ENST00000503842 SALL3Q9BXA9 1300 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms