RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 TMOD3Q9NYL9 352 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 BCL9O00512 1426 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 C5P01031 1676 aa9.62□□□□□ -0.87
CDC42-205ENST00000498236 RNF40O75150 1001 aa9.62□□□□□ -0.87
CDC42-205ENST00000498236 CFHP08603 1231 aa9.62□□□□□ -0.87
CDC42-205ENST00000498236 DDB1Q16531 1140 aa9.62□□□□□ -0.87
CDC42-205ENST00000498236 GRIPAP1Q4V328 841 aa9.62□□□□□ -0.87
CDC42-205ENST00000498236 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
CDC42-205ENST00000498236 ARXQ96QS3 562 aa9.62□□□□□ -0.87
CDC42-205ENST00000498236 ATP10DQ9P241 1426 aa9.62□□□□□ -0.87
CDC42-205ENST00000498236 PRAMEF22A3QJZ6 481 aa9.61□□□□□ -0.87
CDC42-205ENST00000498236 RAD21O60216 631 aa9.61□□□□□ -0.87
CDC42-205ENST00000498236 LRP10Q7Z4F1 713 aa9.61□□□□□ -0.87
CDC42-205ENST00000498236 PIGBQ92521 554 aa9.61□□□□□ -0.87
CDC42-205ENST00000498236 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
CDC42-205ENST00000498236 PHAXQ9H814 394 aaKnown RBP9.61□□□□□ -0.87
CDC42-205ENST00000498236 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
CDC42-205ENST00000498236 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.61□□□□□ -0.87
CDC42-205ENST00000498236 TSR3Q9UJK0 312 aaKnown RBP9.61□□□□□ -0.87
CDC42-205ENST00000498236 F6X3S4 739 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 LAPTM4AQ15012 233 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
CDC42-205ENST00000498236 KSR2Q6VAB6 950 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 RPAP2Q8IXW5 612 aaPredicted RBP9.6□□□□□ -0.87
CDC42-205ENST00000498236 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 DNAAF4Q8WXU2 420 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 TEX13AQ9BXU3 409 aaPredicted RBP9.6□□□□□ -0.87
CDC42-205ENST00000498236 USP21Q9UK80 565 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 USP16Q9Y5T5 823 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 ITGB4P16144 1822 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 ADCY9O60503 1353 aa9.6□□□□□ -0.87
CDC42-205ENST00000498236 THSD7AQ9UPZ6 1657 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 PI4KAP2A4QPH2 592 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 DDX58O95786 925 aaKnown RBP9.59□□□□□ -0.87
CDC42-205ENST00000498236 GNAI3P08754 354 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 FUT2Q10981 343 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 PROSER3Q2NL68 480 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 BEND3Q5T5X7 828 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 PI4KAP1Q8N8J0 262 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 MARCH10Q8NA82 808 aaPredicted RBP9.59□□□□□ -0.87
CDC42-205ENST00000498236 ATG3Q9NT62 314 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
CDC42-205ENST00000498236 CCDC9Q9Y3X0 531 aaKnown RBP9.59□□□□□ -0.87
CDC42-205ENST00000498236 ATRNO75882 1429 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 AP1G2O75843 785 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 ALDH1L1O75891 902 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 GUCA2AQ02747 115 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
CDC42-205ENST00000498236 SLC4A10Q6U841 1118 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 SIRT2Q8IXJ6 389 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 ANKRD44Q8N8A2 993 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 HLA-CQ95604 372 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 GCC1Q96CN9 775 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 MEIS3Q99687 375 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 SRCIN1Q9C0H9 1055 aa9.58□□□□□ -0.88
CDC42-205ENST00000498236 CICQ96RK0 1608 aaPredicted RBP9.57□□□□□ -0.88
CDC42-205ENST00000498236 DOT1LQ8TEK3 1739 aa9.57□□□□□ -0.88
CDC42-205ENST00000498236 TRAK2O60296 914 aa9.57□□□□□ -0.88
CDC42-205ENST00000498236 ANXA1P04083 346 aa9.57□□□□□ -0.88
CDC42-205ENST00000498236 GNAI2P04899 355 aa9.57□□□□□ -0.88
CDC42-205ENST00000498236 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
CDC42-205ENST00000498236 GJD4Q96KN9 370 aaPredicted RBP9.57□□□□□ -0.88
CDC42-205ENST00000498236 USP44Q9H0E7 712 aa9.57□□□□□ -0.88
CDC42-205ENST00000498236 TRPC5Q9UL62 973 aaPredicted RBP9.57□□□□□ -0.88
CDC42-205ENST00000498236 ASAP1Q9ULH1 1129 aa9.57□□□□□ -0.88
CDC42-205ENST00000498236 HPS5Q9UPZ3 1129 aa9.57□□□□□ -0.88
CDC42-205ENST00000498236 AFF2P51816 1311 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 PTCD1O75127 700 aaKnown RBP9.56□□□□□ -0.88
CDC42-205ENST00000498236 NBPF14Q5TI25 921 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 CEP85Q6P2H3 762 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
CDC42-205ENST00000498236 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 LINS1Q8NG48 757 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 XAGE3Q8WTP9 111 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 HDAC5Q9UQL6 1122 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 MAP3K2Q9Y2U5 619 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 UTYO14607 1347 aa9.56□□□□□ -0.88
CDC42-205ENST00000498236 APBB1O00213 710 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 SOCS7O14512 581 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 HMMRO75330 724 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 STARD3NLO95772 234 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 NUCB1Q02818 461 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 MTMR2Q13614 643 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 COPS6Q7L5N1 327 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 MTMR14Q8NCE2 650 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 PLBD2Q8NHP8 589 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 METTL22Q9BUU2 404 aaPredicted RBP9.55□□□□□ -0.88
CDC42-205ENST00000498236 DCTPP1Q9H773 170 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 ZNF831Q5JPB2 1677 aa9.55□□□□□ -0.88
CDC42-205ENST00000498236 UBTFL1P0CB47 393 aaPredicted RBP9.54□□□□□ -0.88
CDC42-205ENST00000498236 MYL6BP14649 208 aa9.54□□□□□ -0.88
CDC42-205ENST00000498236 PPP4CP60510 307 aa9.54□□□□□ -0.88
CDC42-205ENST00000498236 SMARCC1Q92922 1105 aaPredicted RBP9.54□□□□□ -0.88
CDC42-205ENST00000498236 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms