RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RBM6P78332 1123 aaKnown RBP9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 LRRC24Q50LG9 513 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 SUSD4Q5VX71 490 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 ATG9AQ7Z3C6 839 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 HSCBQ8IWL3 235 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 SYNE4Q8N205 404 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 GREM2Q9H772 168 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 GPR108Q9NPR9 543 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 DIAPH3Q9NSV4 1193 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 RTCBQ9Y3I0 505 aaKnown RBP9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 RAD50Q92878 1312 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 NAV1Q8NEY1 1877 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 DUOX1Q9NRD9 1551 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 RPS6KA4O75676 772 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 CSF1RP07333 972 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 MCCP23508 829 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 CLEC4GQ6UXB4 293 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 TTLL11Q8NHH1 800 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 EVI5LQ96CN4 794 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 DBNDD2Q9BQY9 259 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 FSD1Q9BTV5 496 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 ANO2Q9NQ90 1003 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 NARFQ9UHQ1 456 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 LTBP1Q14766 1721 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 EP400Q96L91 3159 aa9.81□□□□□ -0.84
PDZRN3-212ENST00000498048 MYH8P13535 1937 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 CARMIL3Q8ND23 1372 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 A0A1B0GUL7 405 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 HIP1O00291 1037 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 ZPR1O75312 459 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 PHF14O94880 888 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 METTL24Q5JXM2 366 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 USPL1Q5W0Q7 1092 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 PUS3Q9BZE2 481 aaKnown RBP9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 BOLA2Q9H3K6 86 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 CNNM1Q9NRU3 951 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 CEP126Q9P2H0 1117 aa9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 SRP68Q9UHB9 627 aaKnown RBP9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 BAZ2AQ9UIF9 1905 aaKnown RBP9.8□□□□□ -0.84
PDZRN3-212ENST00000498048 MED23Q9ULK4 1368 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 TRIM37O94972 964 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 HCLS1P14317 486 aaPredicted RBP9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 ATP5JP18859 108 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 SLC4A3P48751 1232 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 RABEP1Q15276 862 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 CCDC152Q4G0S7 254 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 RUFY2Q8WXA3 655 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 NEUROD6Q96NK8 337 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 DNAJC2Q99543 621 aaKnown RBP9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 USP26Q9BXU7 913 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 TBC1D2Q9BYX2 928 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 NYXQ9GZU5 481 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 AKAP2Q9Y2D5 859 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 TIAM2Q8IVF5 1701 aa9.79□□□□□ -0.84
PDZRN3-212ENST00000498048 FOCADQ5VW36 1801 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 SGSM2O43147 1006 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 PRKAR2AP13861 404 aaKnown RBP9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 ATP2B3Q16720 1220 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 TBC1D9BQ66K14 1250 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 CWC27Q6UX04 472 aaKnown RBP9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 LDHAL6AQ6ZMR3 332 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 BICDL1Q6ZP65 573 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 SMIM5Q71RC9 77 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 IL25Q9H293 177 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 MYH6P13533 1939 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 MYH2Q9UKX2 1941 aa9.78□□□□□ -0.84
PDZRN3-212ENST00000498048 EPB41L2O43491 1005 aaKnown RBP9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 RFC4P35249 363 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 IGHMBP2P38935 993 aaKnown RBP9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 ERFEQ4G0M1 354 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 TTC39AQ5SRH9 613 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 GORABQ5T7V8 394 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 AMIGO3Q86WK7 504 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 KIF2CQ99661 725 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 HAUS7Q99871 368 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 LRRC4BQ9NT99 713 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 MROH5Q6ZUA9 1318 aa9.77□□□□□ -0.85
PDZRN3-212ENST00000498048 A0A0D9SFI3 127 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 NPHP1O15259 732 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 IFIT1P09914 478 aaKnown RBP9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 SSFA2P28290 1259 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 GTF2E1P29083 439 aaPredicted RBP9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 ADORA1P30542 326 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 NMIQ13287 307 aaPredicted RBP9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 KIAA1211Q6ZU35 1233 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 DDX46Q7L014 1031 aaKnown RBP9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 NBPF5PQ86XG9 351 aaPredicted RBP9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 VGLL2Q8N8G2 317 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 SNX21Q969T3 373 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 EDC3Q96F86 508 aaKnown RBP9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 SETDB2Q96T68 719 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 CDC5LQ99459 802 aaKnown RBP9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 MPHOSPH8Q99549 860 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 PAG1Q9NWQ8 432 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 CCDC171Q6TFL3 1326 aa9.76□□□□□ -0.85
PDZRN3-212ENST00000498048 TCHHQ07283 1943 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms