RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
SRSF4-205ENST00000497015 NUDCQ9Y266 331 aa12.94□□□□□ -0.34
SRSF4-205ENST00000497015 GPR25O00155 361 aa12.93□□□□□ -0.34
SRSF4-205ENST00000497015 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
SRSF4-205ENST00000497015 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
SRSF4-205ENST00000497015 KIF6Q6ZMV9 814 aa12.93□□□□□ -0.34
SRSF4-205ENST00000497015 PPP1R42Q7Z4L9 355 aa12.93□□□□□ -0.34
SRSF4-205ENST00000497015 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
SRSF4-205ENST00000497015 UTP14AQ9BVJ6 771 aaKnown RBP12.93□□□□□ -0.34
SRSF4-205ENST00000497015 TMX4Q9H1E5 349 aaPredicted RBP12.93□□□□□ -0.34
SRSF4-205ENST00000497015 HDAC9Q9UKV0 1011 aa12.93□□□□□ -0.34
SRSF4-205ENST00000497015 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
SRSF4-205ENST00000497015 AKAP11Q9UKA4 1901 aa12.93□□□□□ -0.34
SRSF4-205ENST00000497015 MYBBP1AQ9BQG0 1328 aaKnown RBP12.92□□□□□ -0.34
SRSF4-205ENST00000497015 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
SRSF4-205ENST00000497015 TM4SF4P48230 202 aa12.92□□□□□ -0.34
SRSF4-205ENST00000497015 GRAPQ13588 217 aa12.92□□□□□ -0.34
SRSF4-205ENST00000497015 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
SRSF4-205ENST00000497015 WASHC4Q2M389 1173 aa12.92□□□□□ -0.34
SRSF4-205ENST00000497015 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
SRSF4-205ENST00000497015 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
SRSF4-205ENST00000497015 ZNF428Q96B54 188 aa12.92□□□□□ -0.34
SRSF4-205ENST00000497015 GGA3Q9NZ52 723 aa12.92□□□□□ -0.34
SRSF4-205ENST00000497015 HTTP42858 3142 aa12.92□□□□□ -0.34
SRSF4-205ENST00000497015 TAF1P21675 1872 aa12.91□□□□□ -0.34
SRSF4-205ENST00000497015 UBE2Q2LH0YL09 131 aa12.91□□□□□ -0.34
SRSF4-205ENST00000497015 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
SRSF4-205ENST00000497015 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
SRSF4-205ENST00000497015 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
SRSF4-205ENST00000497015 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
SRSF4-205ENST00000497015 PRAMEF18Q5VWM3 479 aa12.91□□□□□ -0.34
SRSF4-205ENST00000497015 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
SRSF4-205ENST00000497015 COL4A1P02462 1669 aa12.91□□□□□ -0.34
SRSF4-205ENST00000497015 ANXA1P04083 346 aa12.9□□□□□ -0.34
SRSF4-205ENST00000497015 RPS12P25398 132 aaKnown RBP12.9□□□□□ -0.34
SRSF4-205ENST00000497015 GPSM2P81274 684 aa12.9□□□□□ -0.34
SRSF4-205ENST00000497015 SCARF1Q14162 830 aa12.9□□□□□ -0.34
SRSF4-205ENST00000497015 NOM1Q5C9Z4 860 aaKnown RBP12.9□□□□□ -0.34
SRSF4-205ENST00000497015 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
SRSF4-205ENST00000497015 CELF1Q92879 486 aaKnown RBP12.9□□□□□ -0.34
SRSF4-205ENST00000497015 ECE2O60344 883 aa12.89□□□□□ -0.35
SRSF4-205ENST00000497015 ANGEL2Q5VTE6 544 aaKnown RBP12.89□□□□□ -0.35
SRSF4-205ENST00000497015 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
SRSF4-205ENST00000497015 PRKRIP1Q9H875 184 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-205ENST00000497015 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-205ENST00000497015 NSFL1CQ9UNZ2 370 aaKnown RBP12.89□□□□□ -0.35
SRSF4-205ENST00000497015 DLG5Q8TDM6 1919 aa12.88□□□□□ -0.35
SRSF4-205ENST00000497015 CENPFP49454 3210 aa12.88□□□□□ -0.35
SRSF4-205ENST00000497015 ZNF280AP59817 542 aaPredicted RBP12.88□□□□□ -0.35
SRSF4-205ENST00000497015 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
SRSF4-205ENST00000497015 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
SRSF4-205ENST00000497015 LAMB2P55268 1798 aa12.88□□□□□ -0.35
SRSF4-205ENST00000497015 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
SRSF4-205ENST00000497015 EN2P19622 333 aaPredicted RBP12.87□□□□□ -0.35
SRSF4-205ENST00000497015 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.355e-9■■□□□ 13.5
SRSF4-205ENST00000497015 CAP1Q01518 475 aa12.87□□□□□ -0.35
SRSF4-205ENST00000497015 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
SRSF4-205ENST00000497015 GMLQ99445 158 aa12.87□□□□□ -0.35
SRSF4-205ENST00000497015 CFHR5Q9BXR6 569 aa12.87□□□□□ -0.35
SRSF4-205ENST00000497015 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
SRSF4-205ENST00000497015 BRCA2P51587 3418 aa12.87□□□□□ -0.35
SRSF4-205ENST00000497015 SZT2Q5T011 3432 aa12.87□□□□□ -0.35
SRSF4-205ENST00000497015 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
SRSF4-205ENST00000497015 C6orf229H3BNL8 230 aa12.86□□□□□ -0.35
SRSF4-205ENST00000497015 FKTNO75072 461 aa12.86□□□□□ -0.35
SRSF4-205ENST00000497015 FKBP1BP68106 108 aa12.86□□□□□ -0.35
SRSF4-205ENST00000497015 MIER1Q8N108 512 aa12.86□□□□□ -0.35
SRSF4-205ENST00000497015 TBC1D16Q8TBP0 767 aa12.86□□□□□ -0.35
SRSF4-205ENST00000497015 SCN9AQ15858 1988 aa12.85□□□□□ -0.35
SRSF4-205ENST00000497015 ANKRD36CQ5JPF3 1778 aa12.85□□□□□ -0.35
SRSF4-205ENST00000497015 TCIRG1Q13488 830 aa12.85□□□□□ -0.35
SRSF4-205ENST00000497015 COPS6Q7L5N1 327 aa12.85□□□□□ -0.35
SRSF4-205ENST00000497015 TRMT112Q9UI30 125 aaKnown RBP12.85□□□□□ -0.35
SRSF4-205ENST00000497015 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
SRSF4-205ENST00000497015 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
SRSF4-205ENST00000497015 SF3B3Q15393 1217 aaKnown RBP12.84□□□□□ -0.35
SRSF4-205ENST00000497015 TMC4Q7Z404 712 aa12.84□□□□□ -0.35
SRSF4-205ENST00000497015 PNISRQ8TF01 805 aaKnown RBP12.84□□□□□ -0.35
SRSF4-205ENST00000497015 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
SRSF4-205ENST00000497015 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
SRSF4-205ENST00000497015 WTIPA6NIX2 430 aaPredicted RBP12.83□□□□□ -0.36
SRSF4-205ENST00000497015 NEFMP07197 916 aa12.83□□□□□ -0.36
SRSF4-205ENST00000497015 NBPF9Q3BBW0 867 aa12.83□□□□□ -0.36
SRSF4-205ENST00000497015 RSBN1LQ6PCB5 846 aaPredicted RBP12.83□□□□□ -0.36
SRSF4-205ENST00000497015 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
SRSF4-205ENST00000497015 OTUD5Q96G74 571 aa12.83□□□□□ -0.36
SRSF4-205ENST00000497015 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
SRSF4-205ENST00000497015 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
SRSF4-205ENST00000497015 PAPPA2Q9BXP8 1791 aa12.82□□□□□ -0.36
SRSF4-205ENST00000497015 AIMP1Q12904 312 aaKnown RBP12.82□□□□□ -0.36
SRSF4-205ENST00000497015 XAGE3Q8WTP9 111 aa12.82□□□□□ -0.36
SRSF4-205ENST00000497015 FAM89AQ96GI7 184 aa12.82□□□□□ -0.36
SRSF4-205ENST00000497015 PLEKHF1Q96S99 279 aa12.82□□□□□ -0.36
SRSF4-205ENST00000497015 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
SRSF4-205ENST00000497015 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
SRSF4-205ENST00000497015 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
SRSF4-205ENST00000497015 TRIM17Q9Y577 477 aa12.82□□□□□ -0.36
SRSF4-205ENST00000497015 INTS3Q68E01 1043 aaKnown RBP12.81□□□□□ -0.36
SRSF4-205ENST00000497015 AGBL3Q8NEM8 1001 aa12.81□□□□□ -0.36
SRSF4-205ENST00000497015 NECTIN2Q92692 538 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms