RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 SEC62Q99442 399 aaKnown RBP13.16□□□□□ -0.3
CMSS1-208ENST00000496116 DSCC1Q9BVC3 393 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 PLA2G12BQ9BX93 195 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 FIBPO43427 364 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 ITGB4P16144 1822 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 TAF7LQ5H9L4 462 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 CCDC183Q5T5S1 534 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
CMSS1-208ENST00000496116 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
CMSS1-208ENST00000496116 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
CMSS1-208ENST00000496116 CYP21A2P08686 494 aa13.15□□□□□ -0.3
CMSS1-208ENST00000496116 HSP90AB3PQ58FF7 597 aa13.15□□□□□ -0.3
CMSS1-208ENST00000496116 TAF6LQ9Y6J9 622 aa13.15□□□□□ -0.3
CMSS1-208ENST00000496116 COL14A1Q05707 1796 aaKnown RBP13.15□□□□□ -0.3
CMSS1-208ENST00000496116 MAP3K15Q6ZN16 1313 aa13.15□□□□□ -0.3
CMSS1-208ENST00000496116 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
CMSS1-208ENST00000496116 HS1BP3Q53T59 392 aa13.15□□□□□ -0.3
CMSS1-208ENST00000496116 ZMYM1Q5SVZ6 1142 aa13.15□□□□□ -0.3
CMSS1-208ENST00000496116 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
CMSS1-208ENST00000496116 KRT85P78386 507 aa13.14□□□□□ -0.31
CMSS1-208ENST00000496116 FGD1P98174 961 aa13.14□□□□□ -0.31
CMSS1-208ENST00000496116 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
CMSS1-208ENST00000496116 GORABQ5T7V8 394 aa13.14□□□□□ -0.31
CMSS1-208ENST00000496116 FAM184AQ8NB25 1140 aa13.14□□□□□ -0.31
CMSS1-208ENST00000496116 PUS3Q9BZE2 481 aaKnown RBP13.14□□□□□ -0.31
CMSS1-208ENST00000496116 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 LRP6O75581 1613 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 RNF113AO15541 343 aaKnown RBP13.13□□□□□ -0.31
CMSS1-208ENST00000496116 CHGBP05060 677 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 CSF1RP07333 972 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 HSP90B1P14625 803 aaKnown RBP13.13□□□□□ -0.31
CMSS1-208ENST00000496116 TTC39AQ5SRH9 613 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 Q6ZUG5 572 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 GTF3C6Q969F1 213 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 PDLIM2Q96JY6 352 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 STK3Q13188 491 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
CMSS1-208ENST00000496116 BCL9O00512 1426 aa13.13□□□□□ -0.31
CMSS1-208ENST00000496116 EXOC5O00471 708 aa13.12□□□□□ -0.31
CMSS1-208ENST00000496116 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
CMSS1-208ENST00000496116 CDC37L1Q7L3B6 337 aa13.12□□□□□ -0.31
CMSS1-208ENST00000496116 DHX32Q7L7V1 743 aaKnown RBP13.12□□□□□ -0.31
CMSS1-208ENST00000496116 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
CMSS1-208ENST00000496116 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
CMSS1-208ENST00000496116 HSPD1P10809 573 aaKnown RBP13.12□□□□□ -0.31
CMSS1-208ENST00000496116 MSNP26038 577 aaKnown RBP13.12□□□□□ -0.31
CMSS1-208ENST00000496116 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
CMSS1-208ENST00000496116 RNF214Q8ND24 703 aa13.12□□□□□ -0.31
CMSS1-208ENST00000496116 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
CMSS1-208ENST00000496116 ABCC12Q96J65 1359 aa13.11□□□□□ -0.31
CMSS1-208ENST00000496116 MAST3O60307 1309 aa13.11□□□□□ -0.31
CMSS1-208ENST00000496116 ANKRD36CQ5JPF3 1778 aa13.11□□□□□ -0.31
CMSS1-208ENST00000496116 ELP1O95163 1332 aa13.11□□□□□ -0.31
CMSS1-208ENST00000496116 CYP19A1P11511 503 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-208ENST00000496116 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 BRF1Q92994 677 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-208ENST00000496116 LLPHQ9BRT6 129 aaKnown RBP13.1□□□□□ -0.31
CMSS1-208ENST00000496116 SCAND2PQ9GZW5 306 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-208ENST00000496116 KAT6BQ8WYB5 2073 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 LAMA4Q16363 1823 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 MYH3P11055 1940 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 DTNBO60941 627 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 HLFQ16534 295 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 UVSSAQ2YD98 709 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 SYTL4Q96C24 671 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-208ENST00000496116 CTNNA3Q9UI47 895 aa13.1□□□□□ -0.31
CMSS1-208ENST00000496116 ANKRD18BA2A2Z9 1011 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 ITGA6P23229 1130 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 GPTP24298 496 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 METTL24Q5JXM2 366 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 LDHAL6AQ6ZMR3 332 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 FERMT3Q86UX7 667 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 E7EWF7 191 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 PFKFB2O60825 505 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 ADORA1P30542 326 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 CTSWP56202 376 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 TTLL11Q8NHH1 800 aa13.09□□□□□ -0.31
CMSS1-208ENST00000496116 H3BQV1 296 aa13.08□□□□□ -0.32
CMSS1-208ENST00000496116 M0R2C6 588 aa13.08□□□□□ -0.32
CMSS1-208ENST00000496116 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
CMSS1-208ENST00000496116 IL6STP40189 918 aaPredicted RBP13.08□□□□□ -0.32
CMSS1-208ENST00000496116 HMGN5P82970 282 aaKnown RBP13.08□□□□□ -0.32
CMSS1-208ENST00000496116 SCRN1Q12765 414 aa13.08□□□□□ -0.32
CMSS1-208ENST00000496116 WASHC4Q2M389 1173 aa13.08□□□□□ -0.32
CMSS1-208ENST00000496116 SLFNL1Q499Z3 407 aa13.08□□□□□ -0.32
CMSS1-208ENST00000496116 IFFO2Q5TF58 517 aa13.08□□□□□ -0.32
CMSS1-208ENST00000496116 CDCA7Q9BWT1 371 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms