RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 KIF6Q6ZMV9 814 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 FAM89AQ96GI7 184 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 PUS3Q9BZE2 481 aaKnown RBP17.63■□□□□ 0.41
CHTOP-206ENST00000495554 GDPD2Q9HCC8 539 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 ESPNB1AK53 854 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 PCCAP05165 728 aaPredicted RBP17.63■□□□□ 0.41
CHTOP-206ENST00000495554 RPS6KB1P23443 525 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 TICAM2Q86XR7 235 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 ZBTB1Q9Y2K1 713 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
CHTOP-206ENST00000495554 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.62■□□□□ 0.41
CHTOP-206ENST00000495554 PHF14O94880 888 aa17.62■□□□□ 0.41
CHTOP-206ENST00000495554 MCMDC2Q4G0Z9 681 aa17.62■□□□□ 0.41
CHTOP-206ENST00000495554 KBTBD3Q8NAB2 608 aa17.62■□□□□ 0.41
CHTOP-206ENST00000495554 PLA2G12BQ9BX93 195 aa17.62■□□□□ 0.41
CHTOP-206ENST00000495554 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
CHTOP-206ENST00000495554 GADD45BO75293 160 aaPredicted RBP17.61■□□□□ 0.41
CHTOP-206ENST00000495554 CHGBP05060 677 aa17.61■□□□□ 0.41
CHTOP-206ENST00000495554 ST3GAL1Q11201 340 aa17.61■□□□□ 0.41
CHTOP-206ENST00000495554 ZBTB38Q8NAP3 1195 aaPredicted RBP17.61■□□□□ 0.41
CHTOP-206ENST00000495554 CIAO1O76071 339 aa17.61■□□□□ 0.41
CHTOP-206ENST00000495554 CSF1RP07333 972 aa17.61■□□□□ 0.41
CHTOP-206ENST00000495554 NEUROD6Q96NK8 337 aa17.61■□□□□ 0.41
CHTOP-206ENST00000495554 CDCA7Q9BWT1 371 aaPredicted RBP17.61■□□□□ 0.41
CHTOP-206ENST00000495554 MTMR6Q9Y217 621 aa17.61■□□□□ 0.41
CHTOP-206ENST00000495554 CNPY2Q9Y2B0 182 aa17.61■□□□□ 0.41
CHTOP-206ENST00000495554 THRAP3Q9Y2W1 955 aaKnown RBP17.61■□□□□ 0.41
CHTOP-206ENST00000495554 U3KPZ7 1027 aaPredicted RBP17.61■□□□□ 0.41
CHTOP-206ENST00000495554 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
CHTOP-206ENST00000495554 ZNF609O15014 1411 aa17.6■□□□□ 0.41
CHTOP-206ENST00000495554 DDX46Q7L014 1031 aaKnown RBP17.6■□□□□ 0.41
CHTOP-206ENST00000495554 NLRP10Q86W26 655 aa17.6■□□□□ 0.41
CHTOP-206ENST00000495554 TAF6LQ9Y6J9 622 aa17.6■□□□□ 0.41
CHTOP-206ENST00000495554 PHLPP1O60346 1717 aa17.6■□□□□ 0.41
CHTOP-206ENST00000495554 COL9A3Q14050 684 aaPredicted RBP17.59■□□□□ 0.41
CHTOP-206ENST00000495554 DDB1Q16531 1140 aa17.59■□□□□ 0.41
CHTOP-206ENST00000495554 CSPP1Q1MSJ5 1256 aa17.59■□□□□ 0.41
CHTOP-206ENST00000495554 NRAPQ86VF7 1730 aa17.59■□□□□ 0.41
CHTOP-206ENST00000495554 MARCH10Q8NA82 808 aaPredicted RBP17.59■□□□□ 0.41
CHTOP-206ENST00000495554 PALLDQ8WX93 1383 aa17.59■□□□□ 0.41
CHTOP-206ENST00000495554 PDCP20941 246 aa17.59■□□□□ 0.41
CHTOP-206ENST00000495554 GPTP24298 496 aa17.59■□□□□ 0.41
CHTOP-206ENST00000495554 UBE2HP62256 183 aa17.59■□□□□ 0.41
CHTOP-206ENST00000495554 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
CHTOP-206ENST00000495554 SH3TC1Q8TE82 1336 aa17.59■□□□□ 0.41
CHTOP-206ENST00000495554 NUTM2BA6NNL0 878 aaPredicted RBP17.58■□□□□ 0.41
CHTOP-206ENST00000495554 NUTM2EB1AL46 878 aaPredicted RBP17.58■□□□□ 0.41
CHTOP-206ENST00000495554 TOB2Q14106 344 aaPredicted RBP17.58■□□□□ 0.41
CHTOP-206ENST00000495554 NUTM2AQ8IVF1 878 aaPredicted RBP17.58■□□□□ 0.41
CHTOP-206ENST00000495554 PAG1Q9NWQ8 432 aa17.58■□□□□ 0.41
CHTOP-206ENST00000495554 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
CHTOP-206ENST00000495554 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
CHTOP-206ENST00000495554 NEK1Q96PY6 1258 aa17.58■□□□□ 0.4
CHTOP-206ENST00000495554 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.4
CHTOP-206ENST00000495554 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.4
CHTOP-206ENST00000495554 A0A1B0GUL7 405 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 LARP1BQ659C4 914 aaKnown RBP17.57■□□□□ 0.4
CHTOP-206ENST00000495554 TCEANC2Q96MN5 208 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 SEC62Q99442 399 aaKnown RBP17.57■□□□□ 0.4
CHTOP-206ENST00000495554 HELLSQ9NRZ9 838 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 GOLIM4O00461 696 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 IL6STP40189 918 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-206ENST00000495554 CCDC129Q6ZRS4 1044 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 CDHR2Q9BYE9 1310 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 DOT1LQ8TEK3 1739 aa17.57■□□□□ 0.4
CHTOP-206ENST00000495554 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
CHTOP-206ENST00000495554 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
CHTOP-206ENST00000495554 PDLIM2Q96JY6 352 aa17.56■□□□□ 0.4
CHTOP-206ENST00000495554 TTLL11Q8NHH1 800 aa17.56■□□□□ 0.4
CHTOP-206ENST00000495554 CEP126Q9P2H0 1117 aa17.56■□□□□ 0.4
CHTOP-206ENST00000495554 ERVV-1B6SEH8 477 aa17.55■□□□□ 0.4
CHTOP-206ENST00000495554 FIBPO43427 364 aa17.55■□□□□ 0.4
CHTOP-206ENST00000495554 CYP21A2P08686 494 aa17.55■□□□□ 0.4
CHTOP-206ENST00000495554 PIP4K2BP78356 416 aa17.55■□□□□ 0.4
CHTOP-206ENST00000495554 HSP90AB3PQ58FF7 597 aa17.55■□□□□ 0.4
CHTOP-206ENST00000495554 CCDC183Q5T5S1 534 aa17.55■□□□□ 0.4
CHTOP-206ENST00000495554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
CHTOP-206ENST00000495554 LETM1O95202 739 aaPredicted RBP17.55■□□□□ 0.4
CHTOP-206ENST00000495554 DNM1Q05193 864 aaKnown RBP17.55■□□□□ 0.4
CHTOP-206ENST00000495554 HS1BP3Q53T59 392 aa17.55■□□□□ 0.4
CHTOP-206ENST00000495554 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
CHTOP-206ENST00000495554 SLIT2O94813 1529 aa17.54■□□□□ 0.4
CHTOP-206ENST00000495554 EIF5P55010 431 aaKnown RBP17.54■□□□□ 0.4
CHTOP-206ENST00000495554 DZIP3Q86Y13 1208 aaKnown RBP17.54■□□□□ 0.4
CHTOP-206ENST00000495554 DSCC1Q9BVC3 393 aa17.54■□□□□ 0.4
CHTOP-206ENST00000495554 TCHHQ07283 1943 aa17.54■□□□□ 0.4
CHTOP-206ENST00000495554 NUP98P52948 1817 aa17.54■□□□□ 0.4
CHTOP-206ENST00000495554 HMGB1P09429 215 aaKnown RBP17.54■□□□□ 0.4
CHTOP-206ENST00000495554 IFIT1P09914 478 aaKnown RBP17.54■□□□□ 0.4
CHTOP-206ENST00000495554 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
CHTOP-206ENST00000495554 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
CHTOP-206ENST00000495554 BARGINQ6ZT62 677 aa17.54■□□□□ 0.4
CHTOP-206ENST00000495554 ZNF34Q8IZ26 560 aa17.54■□□□□ 0.4
CHTOP-206ENST00000495554 ZMYM1Q5SVZ6 1142 aa17.53■□□□□ 0.4
CHTOP-206ENST00000495554 IPO4Q8TEX9 1081 aaKnown RBP17.53■□□□□ 0.4
CHTOP-206ENST00000495554 AKAP2Q9Y2D5 859 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms