RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SUPT6HQ7KZ85 1726 aaKnown RBP10.13□□□□□ -0.79
VIM-207ENST00000495528 MTUS2Q5JR59 1369 aa10.13□□□□□ -0.79
VIM-207ENST00000495528 H3BRB1 525 aa10.12□□□□□ -0.79
VIM-207ENST00000495528 MAPTP10636 758 aaKnown RBP10.12□□□□□ -0.79
VIM-207ENST00000495528 MPSTP25325 297 aa10.12□□□□□ -0.79
VIM-207ENST00000495528 IDH3AP50213 366 aa10.12□□□□□ -0.79
VIM-207ENST00000495528 TUT1Q9H6E5 874 aaKnown RBP10.12□□□□□ -0.79
VIM-207ENST00000495528 PLA2R1Q13018 1463 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 PLXNC1O60486 1568 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 ZBTB39O15060 712 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 TNP2Q05952 138 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 TYRO3Q06418 890 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 SAMD5Q5TGI4 173 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
VIM-207ENST00000495528 BRD7Q9NPI1 651 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 NDFIP2Q9NV92 336 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 DMGDHQ9UI17 866 aaKnown RBP10.11□□□□□ -0.79
VIM-207ENST00000495528 USP20Q9Y2K6 914 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 MROH2AA6NES4 1674 aa10.11□□□□□ -0.79
VIM-207ENST00000495528 TCOF1Q13428 1488 aaKnown RBP10.1□□□□□ -0.79
VIM-207ENST00000495528 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 SPATA31D1Q6ZQQ2 1576 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 INO80Q9ULG1 1556 aaPredicted RBP10.1□□□□□ -0.79
VIM-207ENST00000495528 CLTCQ00610 1675 aaKnown RBP10.1□□□□□ -0.79
VIM-207ENST00000495528 FAM157BP0CG42 384 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 CD33P20138 364 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 FKBP4Q02790 459 aaKnown RBP eCLIP10.1□□□□□ -0.79
VIM-207ENST00000495528 SFSWAPQ12872 951 aaKnown RBP10.1□□□□□ -0.79
VIM-207ENST00000495528 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 IER5Q5VY09 327 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 GLYCTKQ8IVS8 523 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 KCTD17Q8N5Z5 321 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 ATXN7L1Q9ULK2 861 aaPredicted RBP10.1□□□□□ -0.79
VIM-207ENST00000495528 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
VIM-207ENST00000495528 DHX29Q7Z478 1369 aaKnown RBP10.1□□□□□ -0.79
VIM-207ENST00000495528 KIF3BO15066 747 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 FGFR3P22607 806 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 AAMPQ13685 434 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 GAS6Q14393 721 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 RNFT1Q5M7Z0 435 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 ATCAYQ86WG3 371 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 ABTB2Q8N961 1025 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 CFHR5Q9BXR6 569 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 HCN2Q9UL51 889 aa10.09□□□□□ -0.79
VIM-207ENST00000495528 GNEQ9Y223 722 aaKnown RBP10.09□□□□□ -0.79
VIM-207ENST00000495528 CEP170BQ9Y4F5 1589 aaPredicted RBP10.09□□□□□ -0.79
VIM-207ENST00000495528 RTEL1-TNFRSF6BF6WH68 1400 aa10.08□□□□□ -0.8
VIM-207ENST00000495528 ICMTO60725 284 aa10.08□□□□□ -0.8
VIM-207ENST00000495528 GMPRP36959 345 aa10.08□□□□□ -0.8
VIM-207ENST00000495528 ZAP70P43403 619 aa10.08□□□□□ -0.8
VIM-207ENST00000495528 CTBSQ01459 385 aa10.08□□□□□ -0.8
VIM-207ENST00000495528 SF3B2Q13435 895 aaKnown RBP10.08□□□□□ -0.8
VIM-207ENST00000495528 GRIN2CQ14957 1233 aa10.08□□□□□ -0.8
VIM-207ENST00000495528 RGL4Q8IZJ4 473 aa10.08□□□□□ -0.8
VIM-207ENST00000495528 MYO3AQ8NEV4 1616 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 A2ML1A8K2U0 1454 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 OPLAHO14841 1288 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 EFSO43281 561 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 MX2P20592 715 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 INPP5BP32019 993 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 EIF1AXP47813 144 aaKnown RBP10.07□□□□□ -0.8
VIM-207ENST00000495528 ARSDP51689 593 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
VIM-207ENST00000495528 CNTNAP3BQ96NU0 1288 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 CNTNAP3Q9BZ76 1288 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 EGFL7Q9UHF1 273 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
VIM-207ENST00000495528 TNRQ92752 1358 aa10.06□□□□□ -0.8
VIM-207ENST00000495528 FAM13AO94988 1023 aa10.06□□□□□ -0.8
VIM-207ENST00000495528 HSPA1LP34931 641 aa10.06□□□□□ -0.8
VIM-207ENST00000495528 PIP4K2BP78356 416 aa10.06□□□□□ -0.8
VIM-207ENST00000495528 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
VIM-207ENST00000495528 CMTR1Q8N1G2 835 aaKnown RBP10.06□□□□□ -0.8
VIM-207ENST00000495528 GPR152Q8TDT2 470 aa10.06□□□□□ -0.8
VIM-207ENST00000495528 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
VIM-207ENST00000495528 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
VIM-207ENST00000495528 KCNH4Q9UQ05 1017 aa10.06□□□□□ -0.8
VIM-207ENST00000495528 CEP162Q5TB80 1403 aa10.06□□□□□ -0.8
VIM-207ENST00000495528 ZNF142P52746 1687 aaPredicted RBP10.06□□□□□ -0.8
VIM-207ENST00000495528 TIAM1Q13009 1591 aa10.05□□□□□ -0.8
VIM-207ENST00000495528 SOWAHDA6NJG2 315 aa10.05□□□□□ -0.8
VIM-207ENST00000495528 PATL2C9JE40 543 aaKnown RBP10.05□□□□□ -0.8
VIM-207ENST00000495528 KRT76Q01546 638 aa10.05□□□□□ -0.8
VIM-207ENST00000495528 ANKLE2Q86XL3 938 aa10.05□□□□□ -0.8
VIM-207ENST00000495528 DNMT1P26358 1616 aaKnown RBP10.04□□□□□ -0.8
VIM-207ENST00000495528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.04□□□□□ -0.8
VIM-207ENST00000495528 TOM1O60784 492 aa10.04□□□□□ -0.8
VIM-207ENST00000495528 BMP4P12644 408 aa10.04□□□□□ -0.8
VIM-207ENST00000495528 EPB42P16452 691 aa10.04□□□□□ -0.8
VIM-207ENST00000495528 DNM1Q05193 864 aaKnown RBP10.04□□□□□ -0.8
VIM-207ENST00000495528 RAB44Q7Z6P3 723 aaPredicted RBP10.04□□□□□ -0.8
VIM-207ENST00000495528 THEMISQ8N1K5 641 aaPredicted RBP10.04□□□□□ -0.8
VIM-207ENST00000495528 RTCBQ9Y3I0 505 aaKnown RBP10.04□□□□□ -0.8
VIM-207ENST00000495528 EHBP1L1Q8N3D4 1523 aa10.03□□□□□ -0.8
VIM-207ENST00000495528 ADGBQ8N7X0 1667 aa10.03□□□□□ -0.8
VIM-207ENST00000495528 TSPY4P0CV99 314 aa10.03□□□□□ -0.8
VIM-207ENST00000495528 TSPY10P0CW01 314 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms