RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 MAP3K15Q6ZN16 1313 aa19.65■□□□□ 0.74
CHMP2B-205ENST00000494980 RIMBP2O15034 1052 aa19.64■□□□□ 0.73
CHMP2B-205ENST00000494980 TCIRG1Q13488 830 aa19.64■□□□□ 0.73
CHMP2B-205ENST00000494980 IFNL1Q8IU54 200 aa19.64■□□□□ 0.73
CHMP2B-205ENST00000494980 EYSQ5T1H1 3165 aa19.64■□□□□ 0.73
CHMP2B-205ENST00000494980 A0A1W2PPC1 479 aa19.63■□□□□ 0.73
CHMP2B-205ENST00000494980 WTIPA6NIX2 430 aaPredicted RBP19.63■□□□□ 0.73
CHMP2B-205ENST00000494980 SPRYD7Q5W111 196 aa19.63■□□□□ 0.73
CHMP2B-205ENST00000494980 NBPF11Q86T75 865 aa19.63■□□□□ 0.73
CHMP2B-205ENST00000494980 PTPN12Q05209 780 aaKnown RBP19.62■□□□□ 0.73
CHMP2B-205ENST00000494980 DOK7Q18PE1 504 aa19.62■□□□□ 0.73
CHMP2B-205ENST00000494980 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
CHMP2B-205ENST00000494980 PRDM6Q9NQX0 595 aa19.62■□□□□ 0.73
CHMP2B-205ENST00000494980 STXBP5LQ9Y2K9 1186 aa19.62■□□□□ 0.73
CHMP2B-205ENST00000494980 PSME4Q14997 1843 aa19.61■□□□□ 0.73
CHMP2B-205ENST00000494980 IGF2BP3O00425 579 aaKnown RBP eCLIP19.61■□□□□ 0.73
CHMP2B-205ENST00000494980 ZNF280AP59817 542 aaPredicted RBP19.61■□□□□ 0.73
CHMP2B-205ENST00000494980 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
CHMP2B-205ENST00000494980 TTLL7Q6ZT98 887 aa19.61■□□□□ 0.73
CHMP2B-205ENST00000494980 ZBTB3Q9H5J0 574 aa19.61■□□□□ 0.73
CHMP2B-205ENST00000494980 PTCH2Q9Y6C5 1203 aa19.61■□□□□ 0.73
CHMP2B-205ENST00000494980 CRHR2Q13324 411 aa19.6■□□□□ 0.73
CHMP2B-205ENST00000494980 PPP1R42Q7Z4L9 355 aa19.6■□□□□ 0.73
CHMP2B-205ENST00000494980 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.6■□□□□ 0.73
CHMP2B-205ENST00000494980 ZNF34Q8IZ26 560 aa19.6■□□□□ 0.73
CHMP2B-205ENST00000494980 DEFB123Q8N688 67 aa19.6■□□□□ 0.73
CHMP2B-205ENST00000494980 PRUNE2Q8WUY3 3088 aa19.6■□□□□ 0.73
CHMP2B-205ENST00000494980 MANSC4A6NHS7 340 aaPredicted RBP19.59■□□□□ 0.73
CHMP2B-205ENST00000494980 VIL1P09327 827 aaKnown RBP19.59■□□□□ 0.73
CHMP2B-205ENST00000494980 GRAPQ13588 217 aa19.59■□□□□ 0.73
CHMP2B-205ENST00000494980 Q7L0L9 218 aa19.59■□□□□ 0.73
CHMP2B-205ENST00000494980 GRAPLQ8TC17 118 aaPredicted RBP19.59■□□□□ 0.73
CHMP2B-205ENST00000494980 NF2P35240 595 aa19.58■□□□□ 0.72
CHMP2B-205ENST00000494980 SP3Q02447 781 aa19.58■□□□□ 0.72
CHMP2B-205ENST00000494980 PRKG1Q13976 671 aa19.58■□□□□ 0.72
CHMP2B-205ENST00000494980 DDX46Q7L014 1031 aaKnown RBP19.58■□□□□ 0.72
CHMP2B-205ENST00000494980 SHISA4Q96DD7 197 aa19.58■□□□□ 0.72
CHMP2B-205ENST00000494980 MUC3AQ02505 3323 aa19.58■□□□□ 0.72
CHMP2B-205ENST00000494980 C6orf229H3BNL8 230 aa19.57■□□□□ 0.72
CHMP2B-205ENST00000494980 INHBEP58166 350 aa19.57■□□□□ 0.72
CHMP2B-205ENST00000494980 SLC10A5Q5PT55 438 aa19.57■□□□□ 0.72
CHMP2B-205ENST00000494980 ANKRD13DQ6ZTN6 518 aa19.57■□□□□ 0.72
CHMP2B-205ENST00000494980 PANK3Q9H999 370 aa19.57■□□□□ 0.72
CHMP2B-205ENST00000494980 MYOZ2Q9NPC6 264 aa19.57■□□□□ 0.72
CHMP2B-205ENST00000494980 ZNF646O15015 1829 aaPredicted RBP19.57■□□□□ 0.72
CHMP2B-205ENST00000494980 ZBTB7BO15156 539 aaPredicted RBP19.56■□□□□ 0.72
CHMP2B-205ENST00000494980 ARMC9Q7Z3E5 817 aa19.56■□□□□ 0.72
CHMP2B-205ENST00000494980 SH3TC2Q8TF17 1288 aa19.56■□□□□ 0.72
CHMP2B-205ENST00000494980 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.56■□□□□ 0.72
CHMP2B-205ENST00000494980 NSFL1CQ9UNZ2 370 aaKnown RBP19.56■□□□□ 0.72
CHMP2B-205ENST00000494980 NR2E3Q9Y5X4 410 aa19.56■□□□□ 0.72
CHMP2B-205ENST00000494980 LAMA2P24043 3122 aaKnown RBP19.56■□□□□ 0.72
CHMP2B-205ENST00000494980 PARP10Q53GL7 1025 aa19.55■□□□□ 0.72
CHMP2B-205ENST00000494980 HTATIP2Q9BUP3 242 aa19.55■□□□□ 0.72
CHMP2B-205ENST00000494980 UTP14AQ9BVJ6 771 aaKnown RBP19.55■□□□□ 0.72
CHMP2B-205ENST00000494980 POLLQ9UGP5 575 aa19.55■□□□□ 0.72
CHMP2B-205ENST00000494980 ZSWIM8A7E2V4 1837 aa19.55■□□□□ 0.72
CHMP2B-205ENST00000494980 DIAPH1O60610 1272 aaKnown RBP19.54■□□□□ 0.72
CHMP2B-205ENST00000494980 HCLS1P14317 486 aaPredicted RBP19.54■□□□□ 0.72
CHMP2B-205ENST00000494980 TMC4Q7Z404 712 aa19.54■□□□□ 0.72
CHMP2B-205ENST00000494980 ERBB4Q15303 1308 aa19.53■□□□□ 0.72
CHMP2B-205ENST00000494980 LDLRAD1Q5T700 205 aa19.53■□□□□ 0.72
CHMP2B-205ENST00000494980 GPR153Q6NV75 609 aa19.53■□□□□ 0.72
CHMP2B-205ENST00000494980 RSBN1LQ6PCB5 846 aaPredicted RBP19.53■□□□□ 0.72
CHMP2B-205ENST00000494980 AGBL3Q8NEM8 1001 aa19.53■□□□□ 0.72
CHMP2B-205ENST00000494980 GIGYF2Q6Y7W6 1299 aaKnown RBP19.52■□□□□ 0.72
CHMP2B-205ENST00000494980 EYA3Q99504 573 aa19.52■□□□□ 0.72
CHMP2B-205ENST00000494980 ANGEL1Q9UNK9 670 aaKnown RBP19.52■□□□□ 0.72
CHMP2B-205ENST00000494980 RRP7AQ9Y3A4 280 aaKnown RBP19.52■□□□□ 0.72
CHMP2B-205ENST00000494980 USP17L8P0C7I0 530 aa19.51■□□□□ 0.71
CHMP2B-205ENST00000494980 MYL6BP14649 208 aa19.51■□□□□ 0.71
CHMP2B-205ENST00000494980 GPSM2P81274 684 aa19.51■□□□□ 0.71
CHMP2B-205ENST00000494980 NBPF9Q3BBW0 867 aa19.51■□□□□ 0.71
CHMP2B-205ENST00000494980 MTMR10Q9NXD2 777 aa19.51■□□□□ 0.71
CHMP2B-205ENST00000494980 FZD1Q9UP38 647 aa19.51■□□□□ 0.71
CHMP2B-205ENST00000494980 COL4A1P02462 1669 aa19.5■□□□□ 0.71
CHMP2B-205ENST00000494980 ZBTB48P10074 688 aaPredicted RBP19.5■□□□□ 0.71
CHMP2B-205ENST00000494980 COL9A1P20849 921 aa19.5■□□□□ 0.71
CHMP2B-205ENST00000494980 NECTIN2Q92692 538 aa19.5■□□□□ 0.71
CHMP2B-205ENST00000494980 WNK4Q96J92 1243 aa19.5■□□□□ 0.71
CHMP2B-205ENST00000494980 STAP2Q9UGK3 403 aa19.5■□□□□ 0.71
CHMP2B-205ENST00000494980 ARHGEF6Q15052 776 aa19.49■□□□□ 0.71
CHMP2B-205ENST00000494980 OTUD7BQ6GQQ9 843 aa19.49■□□□□ 0.71
CHMP2B-205ENST00000494980 UBE2Q1Q7Z7E8 422 aa19.49■□□□□ 0.71
CHMP2B-205ENST00000494980 SLC10A4Q96EP9 437 aa19.49■□□□□ 0.71
CHMP2B-205ENST00000494980 GMLQ99445 158 aa19.48■□□□□ 0.71
CHMP2B-205ENST00000494980 G3V3G9 751 aa19.47■□□□□ 0.71
CHMP2B-205ENST00000494980 MTFR1Q15390 333 aa19.47■□□□□ 0.71
CHMP2B-205ENST00000494980 DCAF8Q5TAQ9 597 aa19.47■□□□□ 0.71
CHMP2B-205ENST00000494980 MCM10Q7L590 875 aa19.47■□□□□ 0.71
CHMP2B-205ENST00000494980 TBC1D16Q8TBP0 767 aa19.47■□□□□ 0.71
CHMP2B-205ENST00000494980 CLMNQ96JQ2 1002 aa19.47■□□□□ 0.71
CHMP2B-205ENST00000494980 U2SURPO15042 1029 aaKnown RBP19.46■□□□□ 0.71
CHMP2B-205ENST00000494980 ZC3H12CQ9C0D7 883 aaKnown RBP19.46■□□□□ 0.71
CHMP2B-205ENST00000494980 ALPK3Q96L96 1907 aa19.45■□□□□ 0.7
CHMP2B-205ENST00000494980 CELF1Q92879 486 aaKnown RBP19.45■□□□□ 0.7
CHMP2B-205ENST00000494980 PTPN18Q99952 460 aa19.45■□□□□ 0.7
CHMP2B-205ENST00000494980 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
CHMP2B-205ENST00000494980 PHACTR3Q96KR7 559 aa19.44■□□□□ 0.7
CHMP2B-205ENST00000494980 RAPGEFL1Q9UHV5 662 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms