RNA–Protein interactions for RNA: ENST00000494454.5

TXNRD2-215, Transcript of thioredoxin reductase 2, human

TSL 1 (best)

Gene TXNRD2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNRD2-215	ENST00000494454	DDX60	Q8IY21	1712 aa	Known RBP	19.01	■□□□□ 0.63
TXNRD2-215	ENST00000494454	ABCC12	Q96J65	1359 aa		19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	HCLS1	P14317	486 aa	Predicted RBP	19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	KCNQ4	P56696	695 aa		19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	CREB3L3	Q68CJ9	461 aa		19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	LAMB2	P55268	1798 aa		19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	ATP2B3	Q16720	1220 aa		19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	CCDC158	Q5M9N0	1113 aa		19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	RC3H1	Q5TC82	1133 aa	Known RBP	19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	CNNM1	Q9NRU3	951 aa		19	■□□□□ 0.63
TXNRD2-215	ENST00000494454	RTL9	Q8NET4	1388 aa		18.99	■□□□□ 0.63
TXNRD2-215	ENST00000494454	CHGB	P05060	677 aa		18.99	■□□□□ 0.63
TXNRD2-215	ENST00000494454	CYP2E1	P05181	493 aa	Predicted RBP	18.99	■□□□□ 0.63
TXNRD2-215	ENST00000494454	DEK	P35659	375 aa	Known RBP	18.99	■□□□□ 0.63
TXNRD2-215	ENST00000494454	ADCK5	Q3MIX3	580 aa		18.99	■□□□□ 0.63
TXNRD2-215	ENST00000494454	MCMDC2	Q4G0Z9	681 aa		18.99	■□□□□ 0.63
TXNRD2-215	ENST00000494454	ZKSCAN1	P17029	563 aa	Predicted RBP	18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	FAM182B	Q5T319	152 aa		18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	USPL1	Q5W0Q7	1092 aa		18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	INTS4	Q96HW7	963 aa	Known RBP	18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	ZSWIM6	Q9HCJ5	1215 aa		18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	SCN7A	Q01118	1682 aa		18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	SLC27A2	O14975	620 aa		18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	HSP90B1	P14625	803 aa	Known RBP	18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	CAST	P20810	708 aa	Known RBP	18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	SSFA2	P28290	1259 aa		18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	TTC39A	Q5SRH9	613 aa		18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	CLEC17A	Q6ZS10	378 aa		18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	TRPC5	Q9UL62	973 aa	Predicted RBP	18.98	■□□□□ 0.63
TXNRD2-215	ENST00000494454	FAM177B	A6PVY3	158 aa		18.97	■□□□□ 0.63
TXNRD2-215	ENST00000494454	PDE8B	O95263	885 aa		18.97	■□□□□ 0.63
TXNRD2-215	ENST00000494454	KCNJ4	P48050	445 aa		18.97	■□□□□ 0.63
TXNRD2-215	ENST00000494454	NUCB2	P80303	420 aa		18.97	■□□□□ 0.63
TXNRD2-215	ENST00000494454	GORAB	Q5T7V8	394 aa		18.97	■□□□□ 0.63
TXNRD2-215	ENST00000494454	JAKMIP1	Q96N16	626 aa	Known RBP	18.97	■□□□□ 0.63
TXNRD2-215	ENST00000494454	SEC62	Q99442	399 aa	Known RBP	18.97	■□□□□ 0.63
TXNRD2-215	ENST00000494454	TSGA10IP	Q3SY00	556 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	ZMYM1	Q5SVZ6	1142 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	HELLS	Q9NRZ9	838 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	RPS6KA4	O75676	772 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	AK2	P54819	239 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	VPS53	Q5VIR6	699 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	RNF20	Q5VTR2	975 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	NOL8	Q76FK4	1167 aa	Known RBP	18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	GBP4	Q96PP9	640 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	HMG20B	Q9P0W2	317 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	MROH5	Q6ZUA9	1318 aa		18.96	■□□□□ 0.63
TXNRD2-215	ENST00000494454	LY75	O60449	1722 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	SBF2	Q86WG5	1849 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	DDX11L8	A8MPP1	907 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	SCARF1	Q14162	830 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	CCDC152	Q4G0S7	254 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	CCDC129	Q6ZRS4	1044 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	RUFY3	Q7L099	469 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	BCL2L12	Q9HB09	334 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	RNF113A	O15541	343 aa	Known RBP	18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	CPA1	P15085	419 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	CCNL1	Q9UK58	526 aa	Predicted RBP	18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	CYP46A1	Q9Y6A2	500 aa		18.95	■□□□□ 0.62
TXNRD2-215	ENST00000494454	FGFR2	P21802	821 aa		18.94	■□□□□ 0.62
TXNRD2-215	ENST00000494454	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.94	■□□□□ 0.62
TXNRD2-215	ENST00000494454	PKP1	Q13835	747 aa		18.94	■□□□□ 0.62
TXNRD2-215	ENST00000494454	SEPT12	Q8IYM1	358 aa		18.94	■□□□□ 0.62
TXNRD2-215	ENST00000494454	SEC31B	Q9NQW1	1179 aa		18.94	■□□□□ 0.62
TXNRD2-215	ENST00000494454	NARF	Q9UHQ1	456 aa		18.94	■□□□□ 0.62
TXNRD2-215	ENST00000494454	LIMCH1	Q9UPQ0	1083 aa		18.94	■□□□□ 0.62
TXNRD2-215	ENST00000494454	GSE1	Q14687	1217 aa		18.93	■□□□□ 0.62
TXNRD2-215	ENST00000494454	PUM3	Q15397	648 aa	Known RBP	18.93	■□□□□ 0.62
TXNRD2-215	ENST00000494454		U3KPZ7	1027 aa	Predicted RBP	18.93	■□□□□ 0.62
TXNRD2-215	ENST00000494454	ARAP2	Q8WZ64	1704 aa		18.93	■□□□□ 0.62
TXNRD2-215	ENST00000494454	PSMA5	P28066	241 aa		18.93	■□□□□ 0.62
TXNRD2-215	ENST00000494454	SLFNL1	Q499Z3	407 aa		18.93	■□□□□ 0.62
TXNRD2-215	ENST00000494454	PDRG1	Q9NUG6	133 aa		18.93	■□□□□ 0.62
TXNRD2-215	ENST00000494454	TAF6L	Q9Y6J9	622 aa		18.93	■□□□□ 0.62
TXNRD2-215	ENST00000494454	ZAP70	P43403	619 aa		18.92	■□□□□ 0.62
TXNRD2-215	ENST00000494454	LPIN2	Q92539	896 aa		18.92	■□□□□ 0.62
TXNRD2-215	ENST00000494454	ZDHHC9	Q9Y397	364 aa		18.92	■□□□□ 0.62
TXNRD2-215	ENST00000494454	AKAP11	Q9UKA4	1901 aa		18.92	■□□□□ 0.62
TXNRD2-215	ENST00000494454	MAST3	O60307	1309 aa		18.92	■□□□□ 0.62
TXNRD2-215	ENST00000494454	TAF1L	Q8IZX4	1826 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	GNPAT	O15228	680 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	MCAM	P43121	646 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	SMIM5	Q71RC9	77 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	ZFY	P08048	801 aa	Predicted RBP	18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	ERFE	Q4G0M1	354 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	TBC1D9B	Q66K14	1250 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	PI16	Q6UXB8	463 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	MPHOSPH8	Q99549	860 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	DSCC1	Q9BVC3	393 aa		18.91	■□□□□ 0.62
TXNRD2-215	ENST00000494454	ARID4A	P29374	1257 aa	Predicted RBP	18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	COL24A1	Q17RW2	1714 aa		18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	BAG4	O95429	457 aa	Known RBP	18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	COL9A3	Q14050	684 aa	Predicted RBP	18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	KRT32	Q14532	448 aa		18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	SF3B3	Q15393	1217 aa	Known RBP	18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	SLC10A5	Q5PT55	438 aa		18.9	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms