RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	COL4A5	P29400	1685 aa		13.2	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	CT47B1	P0C2W7	299 aa	Predicted RBP	13.19	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	EIF6	P56537	245 aa	Known RBP	13.19	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	GCKR	Q14397	625 aa		13.19	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	ALDH1L2	Q3SY69	923 aa		13.19	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.19	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	ZBED9	Q6R2W3	1325 aa		13.18	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	CA12	O43570	354 aa		13.18	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	GRAP	Q13588	217 aa		13.18	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	CCDC152	Q4G0S7	254 aa		13.18	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	BEND3	Q5T5X7	828 aa		13.18	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	GRAPL	Q8TC17	118 aa	Predicted RBP	13.18	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	SRCIN1	Q9C0H9	1055 aa		13.18	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	PGAP2	Q9UHJ9	254 aa		13.18	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	PTPRC	P08575	1304 aa		13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	CDHR2	Q9BYE9	1310 aa		13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	LTBP1	Q14766	1721 aa		13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792		H7C1W4	665 aa		13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	BBOX1	O75936	387 aa		13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	LMOD1	P29536	600 aa	Predicted RBP	13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	SF3B3	Q15393	1217 aa	Known RBP	13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	HHIPL1	Q96JK4	782 aa		13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	ZIC5	Q96T25	663 aa		13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.17	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	TAF1	P21675	1872 aa		13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	RARS	P54136	660 aa	Known RBP	13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	BRPF1	P55201	1214 aa	Predicted RBP	13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	CTSW	P56202	376 aa		13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	LARGE2	Q8N3Y3	721 aa		13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	CELF1	Q92879	486 aa	Known RBP	13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	SEC31B	Q9NQW1	1179 aa		13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	GPRC5D	Q9NZD1	345 aa		13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	NOB1	Q9ULX3	412 aa	Known RBP	13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	CHMP3	Q9Y3E7	222 aa		13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	ATP6V0A2	Q9Y487	856 aa		13.16	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	THSD7B	Q9C0I4	1608 aa		13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	ALDH1L1	O75891	902 aa		13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	CELF2	O95319	508 aa	Known RBP	13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	HIRA	P54198	1017 aa	Predicted RBP	13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	DGKZ	Q13574	1117 aa		13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	SP8	Q8IXZ3	490 aa		13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	FRAT1	Q92837	279 aa	Predicted RBP	13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	VPS33B	Q9H267	617 aa		13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	ADARB2	Q9NS39	739 aa	Known RBP	13.15	□□□□□ -0.3
TRAPPC12-222	ENST00000493792	TNRC18	O15417	2968 aa	Predicted RBP	13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	GRM8	O00222	908 aa		13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	RPS8	P62241	208 aa	Known RBP	13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	CXCL9	Q07325	125 aa		13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	CIAPIN1	Q6FI81	312 aa		13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	DPP8	Q6V1X1	898 aa	Predicted RBP	13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	TMC4	Q7Z404	712 aa		13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	ANKRD18A	Q8IVF6	992 aa		13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	MPND	Q8N594	471 aa		13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.14	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	KIF16B	Q96L93	1317 aa		13.13	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	TTLL11	Q8NHH1	800 aa		13.13	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	CDC5L	Q99459	802 aa	Known RBP	13.13	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	API5	Q9BZZ5	524 aa	Known RBP	13.13	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.13	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	MYH3	P11055	1940 aa		13.13	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	IPO8	O15397	1037 aa	Known RBP	13.12	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	BCAR3	O75815	825 aa		13.12	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	SUPT20H	Q8NEM7	779 aa		13.12	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	YTHDC1	Q96MU7	727 aa	Known RBP	13.12	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	GREM2	Q9H772	168 aa		13.12	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	C6orf229	H3BNL8	230 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	PPIP5K2	O43314	1243 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	ITGA6	P23229	1130 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	IGHMBP2	P38935	993 aa	Known RBP	13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	GMPS	P49915	693 aa	Predicted RBP	13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	CASP7	P55210	303 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	AOC3	Q16853	763 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	DLK2	Q6UY11	383 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	NIM1K	Q8IY84	436 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	ZC3H15	Q8WU90	426 aa	Known RBP	13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	PLA2G12B	Q9BX93	195 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	ANKIB1	Q9P2G1	1089 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	ZNRF3	Q9ULT6	936 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	COL4A1	P02462	1669 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	PDE4DIP	Q5VU43	2346 aa		13.11	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	ANKRD18B	A2A2Z9	1011 aa		13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	CCT4	P50991	539 aa	Known RBP	13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	GPSM2	P81274	684 aa		13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	NOG	Q13253	232 aa		13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	TAF7L	Q5H9L4	462 aa		13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	LMBR1L	Q6UX01	489 aa		13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	CDC37L1	Q7L3B6	337 aa		13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	SPEF2	Q9C093	1822 aa		13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	CASP8AP2	Q9UKL3	1982 aa		13.1	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	FAM155A	B1AL88	458 aa	Predicted RBP	13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792		G3V3G9	751 aa		13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	FOXO4	P98177	505 aa		13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	KIAA2012	Q0VF49	1180 aa		13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	IFIT5	Q13325	482 aa	Known RBP	13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	DCAF8	Q5TAQ9	597 aa		13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	TRPM4	Q8TD43	1214 aa		13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	CLUAP1	Q96AJ1	413 aa		13.09	□□□□□ -0.31
TRAPPC12-222	ENST00000493792	SUCLG2	Q96I99	432 aa		13.09	□□□□□ -0.31

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