RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FGD1P98174 961 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 MCMDC2Q4G0Z9 681 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 TTC6Q86TZ1 520 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 KBTBD3Q8NAB2 608 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 ZSCAN31Q96LW9 406 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-220ENST00000492280 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 STRCQ7RTU9 1775 aa14.81□□□□□ -0.04
HMGN1-220ENST00000492280 IFIT1P09914 478 aaKnown RBP14.81□□□□□ -0.04
HMGN1-220ENST00000492280 GPHNQ9NQX3 736 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-220ENST00000492280 ABCA3Q99758 1704 aa14.81□□□□□ -0.04
HMGN1-220ENST00000492280 CCT2P78371 535 aaKnown RBP14.81□□□□□ -0.04
HMGN1-220ENST00000492280 CEBPZQ03701 1054 aaKnown RBP14.81□□□□□ -0.04
HMGN1-220ENST00000492280 CAMK4Q16566 473 aa14.81□□□□□ -0.04
HMGN1-220ENST00000492280 NCOA5Q9HCD5 579 aaKnown RBP14.81□□□□□ -0.04
HMGN1-220ENST00000492280 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
HMGN1-220ENST00000492280 M0R2C6 588 aa14.8□□□□□ -0.04
HMGN1-220ENST00000492280 SLC4A9Q96Q91 983 aa14.8□□□□□ -0.04
HMGN1-220ENST00000492280 APOBRQ0VD83 1088 aa14.8□□□□□ -0.04
HMGN1-220ENST00000492280 CCDC191Q8NCU4 936 aa14.8□□□□□ -0.04
HMGN1-220ENST00000492280 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.8□□□□□ -0.04
HMGN1-220ENST00000492280 MAST3O60307 1309 aa14.8□□□□□ -0.04
HMGN1-220ENST00000492280 JCADQ9P266 1359 aa14.8□□□□□ -0.04
HMGN1-220ENST00000492280 LAMA4Q16363 1823 aa14.8□□□□□ -0.04
HMGN1-220ENST00000492280 ABCC6O95255 1503 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 UBE2HP62256 183 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 CCDC57Q2TAC2 916 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 SYAP1Q96A49 352 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-220ENST00000492280 FTOQ9C0B1 505 aaKnown RBP eCLIP14.79□□□□□ -0.047e-6■■□□□ 12.9
HMGN1-220ENST00000492280 IL15P40933 162 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-220ENST00000492280 TAF7LQ5H9L4 462 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 CCDC183Q5T5S1 534 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 GORABQ5T7V8 394 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 ZSCAN30Q86W11 494 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 PDLIM2Q96JY6 352 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 ZNF830Q96NB3 372 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-220ENST00000492280 ATG3Q9NT62 314 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 GOLGB1Q14789 3259 aaKnown RBP14.79□□□□□ -0.04
HMGN1-220ENST00000492280 SNAP23O00161 211 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 LIG1P18858 919 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 MSNP26038 577 aaKnown RBP14.79□□□□□ -0.04
HMGN1-220ENST00000492280 GUCY1B3Q02153 619 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 USPL1Q5W0Q7 1092 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 TMEM87AQ8NBN3 555 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 TBC1D2BQ9UPU7 963 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 ZBTB1Q9Y2K1 713 aa14.79□□□□□ -0.04
HMGN1-220ENST00000492280 SCRN1Q12765 414 aa14.78□□□□□ -0.04
HMGN1-220ENST00000492280 TCIRG1Q13488 830 aa14.78□□□□□ -0.04
HMGN1-220ENST00000492280 NKX1-1Q15270 411 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-220ENST00000492280 OSBP2Q969R2 916 aa14.78□□□□□ -0.04
HMGN1-220ENST00000492280 WASHC4Q2M389 1173 aa14.78□□□□□ -0.04
HMGN1-220ENST00000492280 GREM2Q9H772 168 aa14.78□□□□□ -0.04
HMGN1-220ENST00000492280 HMG20BQ9P0W2 317 aa14.78□□□□□ -0.04
HMGN1-220ENST00000492280 HSPD1P10809 573 aaKnown RBP14.77□□□□□ -0.04
HMGN1-220ENST00000492280 GTF3C6Q969F1 213 aa14.77□□□□□ -0.04
HMGN1-220ENST00000492280 XAGE2Q96GT9 111 aa14.77□□□□□ -0.04
HMGN1-220ENST00000492280 ISCA1Q9BUE6 129 aa14.77□□□□□ -0.04
HMGN1-220ENST00000492280 CEP126Q9P2H0 1117 aa14.77□□□□□ -0.04
HMGN1-220ENST00000492280 TNS2Q63HR2 1409 aa14.77□□□□□ -0.05
HMGN1-220ENST00000492280 PAPPAQ13219 1627 aa14.77□□□□□ -0.05
HMGN1-220ENST00000492280 CKAP2LQ8IYA6 745 aa14.77□□□□□ -0.05
HMGN1-220ENST00000492280 HELBQ8NG08 1087 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-220ENST00000492280 DENND2AQ9ULE3 1009 aa14.77□□□□□ -0.05
HMGN1-220ENST00000492280 ZAP70P43403 619 aa14.76□□□□□ -0.05
HMGN1-220ENST00000492280 TTC39AQ5SRH9 613 aa14.76□□□□□ -0.05
HMGN1-220ENST00000492280 KIF6Q6ZMV9 814 aa14.76□□□□□ -0.05
HMGN1-220ENST00000492280 ATP6V1DQ9Y5K8 247 aa14.76□□□□□ -0.05
HMGN1-220ENST00000492280 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-220ENST00000492280 PTMAP06454 111 aaKnown RBP14.76□□□□□ -0.05
HMGN1-220ENST00000492280 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.76□□□□□ -0.05
HMGN1-220ENST00000492280 MYO5AQ9Y4I1 1855 aaKnown RBP14.76□□□□□ -0.05
HMGN1-220ENST00000492280 SH3TC1Q8TE82 1336 aa14.75□□□□□ -0.05
HMGN1-220ENST00000492280 KDM4AO75164 1064 aa14.75□□□□□ -0.05
HMGN1-220ENST00000492280 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
HMGN1-220ENST00000492280 ITGB4P16144 1822 aa14.75□□□□□ -0.05
HMGN1-220ENST00000492280 E7EWF7 191 aa14.75□□□□□ -0.05
HMGN1-220ENST00000492280 KRT85P78386 507 aa14.75□□□□□ -0.05
HMGN1-220ENST00000492280 ANKRD1Q15327 319 aa14.75□□□□□ -0.05
HMGN1-220ENST00000492280 FOXP2O15409 715 aa14.74□□□□□ -0.05
HMGN1-220ENST00000492280 C17orf53Q8N3J3 647 aaPredicted RBP14.74□□□□□ -0.05
HMGN1-220ENST00000492280 NKX2-3Q8TAU0 364 aa14.74□□□□□ -0.05
HMGN1-220ENST00000492280 ACSBG1Q96GR2 724 aa14.74□□□□□ -0.05
HMGN1-220ENST00000492280 PUS7LQ9H0K6 701 aaKnown RBP14.74□□□□□ -0.05
HMGN1-220ENST00000492280 PALLDQ8WX93 1383 aa14.74□□□□□ -0.05
HMGN1-220ENST00000492280 A0A087WWV3 80 aa14.74□□□□□ -0.05
HMGN1-220ENST00000492280 RNF113AO15541 343 aaKnown RBP14.74□□□□□ -0.05
HMGN1-220ENST00000492280 ITGA6P23229 1130 aa14.74□□□□□ -0.05
HMGN1-220ENST00000492280 IFIT5Q13325 482 aaKnown RBP14.74□□□□□ -0.05
HMGN1-220ENST00000492280 OTUD7BQ6GQQ9 843 aa14.74□□□□□ -0.05
HMGN1-220ENST00000492280 H3BQV1 296 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 AP5Z1O43299 807 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 PHF14O94880 888 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 ADAMTS2O95450 1211 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 CTDNEP1O95476 244 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 TSGA10IPQ3SY00 556 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 METTL24Q5JXM2 366 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 IFFO2Q5TF58 517 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 SPATA32Q96LK8 384 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 KRT32Q14532 448 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 GJB4Q9NTQ9 266 aa14.73□□□□□ -0.05
HMGN1-220ENST00000492280 DACT1Q9NYF0 836 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms