RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
SEC61A1-206ENST00000491668 DBNDD1Q9H9R9 158 aa16.22■□□□□ 0.19
SEC61A1-206ENST00000491668 RTL9Q8NET4 1388 aa16.22■□□□□ 0.19
SEC61A1-206ENST00000491668 SCN9AQ15858 1988 aa16.21■□□□□ 0.19
SEC61A1-206ENST00000491668 FMR1Q06787 632 aaKnown RBP eCLIP16.21■□□□□ 0.19
SEC61A1-206ENST00000491668 HIRAP54198 1017 aaPredicted RBP16.2■□□□□ 0.18
SEC61A1-206ENST00000491668 DOK7Q18PE1 504 aa16.2■□□□□ 0.18
SEC61A1-206ENST00000491668 USP50Q70EL3 339 aaPredicted RBP16.2■□□□□ 0.18
SEC61A1-206ENST00000491668 PLA2G12BQ9BX93 195 aa16.2■□□□□ 0.18
SEC61A1-206ENST00000491668 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
SEC61A1-206ENST00000491668 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
SEC61A1-206ENST00000491668 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
SEC61A1-206ENST00000491668 PSMD14O00487 310 aa16.19■□□□□ 0.18
SEC61A1-206ENST00000491668 ECE2O60344 883 aa16.19■□□□□ 0.18
SEC61A1-206ENST00000491668 UFL1O94874 794 aa16.19■□□□□ 0.18
SEC61A1-206ENST00000491668 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
SEC61A1-206ENST00000491668 TNIP1Q15025 636 aa16.19■□□□□ 0.18
SEC61A1-206ENST00000491668 BEND3Q5T5X7 828 aa16.19■□□□□ 0.18
SEC61A1-206ENST00000491668 ANKRD18AQ8IVF6 992 aa16.19■□□□□ 0.18
SEC61A1-206ENST00000491668 TRAF5O00463 557 aa16.18■□□□□ 0.18
SEC61A1-206ENST00000491668 CSF1RP07333 972 aa16.18■□□□□ 0.18
SEC61A1-206ENST00000491668 TRPM4Q8TD43 1214 aa16.18■□□□□ 0.18
SEC61A1-206ENST00000491668 ANKIB1Q9P2G1 1089 aa16.18■□□□□ 0.18
SEC61A1-206ENST00000491668 MKRN1Q9UHC7 482 aaKnown RBP16.18■□□□□ 0.18
SEC61A1-206ENST00000491668 MINPP1Q9UNW1 487 aa16.18■□□□□ 0.18
SEC61A1-206ENST00000491668 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 TMEM88BA6NKF7 163 aa16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 EGFRP00533 1210 aa16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 CDC5LQ99459 802 aaKnown RBP16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 EYA3Q99504 573 aa16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 BSDC1Q9NW68 430 aaPredicted RBP16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 PGAP2Q9UHJ9 254 aa16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 CNOT7Q9UIV1 285 aaKnown RBP16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 XDHP47989 1333 aa16.17■□□□□ 0.18
SEC61A1-206ENST00000491668 FOXO4P98177 505 aa16.16■□□□□ 0.18
SEC61A1-206ENST00000491668 MICALL2Q8IY33 904 aa16.16■□□□□ 0.18
SEC61A1-206ENST00000491668 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
SEC61A1-206ENST00000491668 ZC3H12CQ9C0D7 883 aaKnown RBP16.16■□□□□ 0.18
SEC61A1-206ENST00000491668 ITGA6P23229 1130 aa16.15■□□□□ 0.18
SEC61A1-206ENST00000491668 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
SEC61A1-206ENST00000491668 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
SEC61A1-206ENST00000491668 CST9Q5W186 159 aa16.15■□□□□ 0.18
SEC61A1-206ENST00000491668 DPF2Q92785 391 aa16.15■□□□□ 0.18
SEC61A1-206ENST00000491668 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
SEC61A1-206ENST00000491668 VIL1P09327 827 aaKnown RBP16.14■□□□□ 0.17
SEC61A1-206ENST00000491668 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
SEC61A1-206ENST00000491668 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
SEC61A1-206ENST00000491668 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.17
SEC61A1-206ENST00000491668 ZNF646O15015 1829 aaPredicted RBP16.13■□□□□ 0.17
SEC61A1-206ENST00000491668 PSME4Q14997 1843 aa16.13■□□□□ 0.17
SEC61A1-206ENST00000491668 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
SEC61A1-206ENST00000491668 KLRK1P26718 216 aa16.13■□□□□ 0.17
SEC61A1-206ENST00000491668 VEGFBP49765 207 aa16.13■□□□□ 0.17
SEC61A1-206ENST00000491668 DLK2Q6UY11 383 aa16.13■□□□□ 0.17
SEC61A1-206ENST00000491668 TXNRD3Q86VQ6 643 aa16.13■□□□□ 0.17
SEC61A1-206ENST00000491668 GLIS2Q9BZE0 524 aaPredicted RBP16.13■□□□□ 0.17
SEC61A1-206ENST00000491668 RASSF10A6NK89 507 aa16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 E9PSI1 815 aa16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 CCT4P50991 539 aaKnown RBP16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 TRMT2AQ8IZ69 625 aaKnown RBP16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 KAZALD1Q96I82 304 aa16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 GMLQ99445 158 aa16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 TRPM7Q96QT4 1865 aa16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 MED23Q9ULK4 1368 aa16.12■□□□□ 0.17
SEC61A1-206ENST00000491668 ZNF609O15014 1411 aa16.11■□□□□ 0.17
SEC61A1-206ENST00000491668 H7C1D1 291 aa16.11■□□□□ 0.17
SEC61A1-206ENST00000491668 GRM8O00222 908 aa16.11■□□□□ 0.17
SEC61A1-206ENST00000491668 HSPA1AP0DMV8 641 aaKnown RBP16.11■□□□□ 0.17
SEC61A1-206ENST00000491668 HSPA1BP0DMV9 641 aaKnown RBP16.11■□□□□ 0.17
SEC61A1-206ENST00000491668 RPS12P25398 132 aaKnown RBP16.11■□□□□ 0.17
SEC61A1-206ENST00000491668 TBC1D10BQ4KMP7 808 aaPredicted RBP16.11■□□□□ 0.17
SEC61A1-206ENST00000491668 SSH1Q8WYL5 1049 aa16.11■□□□□ 0.17
SEC61A1-206ENST00000491668 SNAP23O00161 211 aa16.1■□□□□ 0.17
SEC61A1-206ENST00000491668 ALDH1L1O75891 902 aa16.1■□□□□ 0.17
SEC61A1-206ENST00000491668 IGHMBP2P38935 993 aaKnown RBP16.1■□□□□ 0.17
SEC61A1-206ENST00000491668 SLC4A10Q6U841 1118 aa16.1■□□□□ 0.17
SEC61A1-206ENST00000491668 IRS2Q9Y4H2 1338 aa16.1■□□□□ 0.17
SEC61A1-206ENST00000491668 A0A1B0GUL6 1792 aa16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 NBPF7P0C2Y1 421 aaPredicted RBP16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 ZNF280AP59817 542 aaPredicted RBP16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 COL13A1Q5TAT6 717 aaPredicted RBP16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 RSBN1LQ6PCB5 846 aaPredicted RBP16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 LMBR1LQ6UX01 489 aa16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 PODNQ7Z5L7 613 aa16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 SRCIN1Q9C0H9 1055 aa16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 LEMD3Q9Y2U8 911 aa16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 ASTN2O75129 1339 aaPredicted RBP16.09■□□□□ 0.17
SEC61A1-206ENST00000491668 POLR2AP24928 1970 aaKnown RBP16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 ANKRD18BA2A2Z9 1011 aa16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 CHRNDQ07001 517 aa16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 DEFB115Q30KQ5 88 aa16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 RBM26Q5T8P6 1007 aaKnown RBP16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 ZNF594Q96JF6 807 aaPredicted RBP16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 MPHOSPH8Q99549 860 aa16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 ABT1Q9ULW3 272 aaKnown RBP16.08■□□□□ 0.16
SEC61A1-206ENST00000491668 ZNF804BA4D1E1 1349 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms