RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 GGA1Q9UJY5 639 aa22.64■■□□□ 1.21
ARPC1B-220ENST00000491294 RTL9Q8NET4 1388 aa22.63■■□□□ 1.21
ARPC1B-220ENST00000491294 UFL1O94874 794 aa22.62■■□□□ 1.21
ARPC1B-220ENST00000491294 GREM2Q9H772 168 aa22.62■■□□□ 1.21
ARPC1B-220ENST00000491294 TMEM88BA6NKF7 163 aa22.61■■□□□ 1.21
ARPC1B-220ENST00000491294 CASP7P55210 303 aa22.61■■□□□ 1.21
ARPC1B-220ENST00000491294 DOK7Q18PE1 504 aa22.61■■□□□ 1.21
ARPC1B-220ENST00000491294 GPR101Q96P66 508 aaPredicted RBP22.61■■□□□ 1.21
ARPC1B-220ENST00000491294 BSDC1Q9NW68 430 aaPredicted RBP22.61■■□□□ 1.21
ARPC1B-220ENST00000491294 XDHP47989 1333 aa22.6■■□□□ 1.21
ARPC1B-220ENST00000491294 F6X3S4 739 aa22.6■■□□□ 1.21
ARPC1B-220ENST00000491294 PSMD14O00487 310 aa22.6■■□□□ 1.21
ARPC1B-220ENST00000491294 ECE2O60344 883 aa22.6■■□□□ 1.21
ARPC1B-220ENST00000491294 ATP2B4P23634 1241 aa22.59■■□□□ 1.21
ARPC1B-220ENST00000491294 BEND3Q5T5X7 828 aa22.59■■□□□ 1.21
ARPC1B-220ENST00000491294 DPF2Q92785 391 aa22.59■■□□□ 1.21
ARPC1B-220ENST00000491294 CNOT7Q9UIV1 285 aaKnown RBP22.59■■□□□ 1.21
ARPC1B-220ENST00000491294 E9PSI1 815 aa22.58■■□□□ 1.21
ARPC1B-220ENST00000491294 G3V3G9 751 aa22.58■■□□□ 1.21
ARPC1B-220ENST00000491294 H7C1D1 291 aa22.58■■□□□ 1.21
ARPC1B-220ENST00000491294 CSF1RP07333 972 aa22.58■■□□□ 1.21
ARPC1B-220ENST00000491294 DCAF8Q5TAQ9 597 aa22.58■■□□□ 1.21
ARPC1B-220ENST00000491294 MKRN1Q9UHC7 482 aaKnown RBP22.58■■□□□ 1.21
ARPC1B-220ENST00000491294 MINPP1Q9UNW1 487 aa22.58■■□□□ 1.21
ARPC1B-220ENST00000491294 MYH3P11055 1940 aa22.57■■□□□ 1.2
ARPC1B-220ENST00000491294 IGHMBP2P38935 993 aaKnown RBP22.57■■□□□ 1.2
ARPC1B-220ENST00000491294 ZBTB12Q9Y330 459 aaPredicted RBP22.57■■□□□ 1.2
ARPC1B-220ENST00000491294 CCER2I3L3R5 266 aa22.56■■□□□ 1.2
ARPC1B-220ENST00000491294 ITGA6P23229 1130 aa22.56■■□□□ 1.2
ARPC1B-220ENST00000491294 RPS12P25398 132 aaKnown RBP22.56■■□□□ 1.2
ARPC1B-220ENST00000491294 MICALL2Q8IY33 904 aa22.56■■□□□ 1.2
ARPC1B-220ENST00000491294 ZC3H15Q8WU90 426 aaKnown RBP22.56■■□□□ 1.2
ARPC1B-220ENST00000491294 KCNQ5Q9NR82 932 aa22.56■■□□□ 1.2
ARPC1B-220ENST00000491294 CNTNAP1P78357 1384 aa22.55■■□□□ 1.2
ARPC1B-220ENST00000491294 FAM161AQ3B820 660 aa22.55■■□□□ 1.2
ARPC1B-220ENST00000491294 PGAP2Q9UHJ9 254 aa22.55■■□□□ 1.2
ARPC1B-220ENST00000491294 VIL1P09327 827 aaKnown RBP22.54■■□□□ 1.2
ARPC1B-220ENST00000491294 HIRAP54198 1017 aaPredicted RBP22.54■■□□□ 1.2
ARPC1B-220ENST00000491294 SLFN5Q08AF3 891 aa22.54■■□□□ 1.2
ARPC1B-220ENST00000491294 MPHOSPH8Q99549 860 aa22.54■■□□□ 1.2
ARPC1B-220ENST00000491294 SHTN1A0MZ66 631 aa22.53■■□□□ 1.2
ARPC1B-220ENST00000491294 ALDH1L1O75891 902 aa22.53■■□□□ 1.2
ARPC1B-220ENST00000491294 TRPM4Q8TD43 1214 aa22.53■■□□□ 1.2
ARPC1B-220ENST00000491294 ANKRD18BA2A2Z9 1011 aa22.52■■□□□ 1.2
ARPC1B-220ENST00000491294 GRM8O00222 908 aa22.52■■□□□ 1.2
ARPC1B-220ENST00000491294 CCT4P50991 539 aaKnown RBP22.52■■□□□ 1.2
ARPC1B-220ENST00000491294 PODNQ7Z5L7 613 aa22.52■■□□□ 1.2
ARPC1B-220ENST00000491294 LEMD3Q9Y2U8 911 aa22.52■■□□□ 1.2
ARPC1B-220ENST00000491294 FOXO4P98177 505 aa22.51■■□□□ 1.19
ARPC1B-220ENST00000491294 FMR1Q06787 632 aaKnown RBP eCLIP22.51■■□□□ 1.192e-13■■■□□ 15.5
ARPC1B-220ENST00000491294 SLC4A10Q6U841 1118 aa22.51■■□□□ 1.19
ARPC1B-220ENST00000491294 SAMD7Q7Z3H4 446 aa22.51■■□□□ 1.19
ARPC1B-220ENST00000491294 MRPL50Q8N5N7 158 aaKnown RBP22.51■■□□□ 1.19
ARPC1B-220ENST00000491294 SRCIN1Q9C0H9 1055 aa22.51■■□□□ 1.19
ARPC1B-220ENST00000491294 ANKRD2Q9GZV1 360 aa22.51■■□□□ 1.19
ARPC1B-220ENST00000491294 C9orf78Q9NZ63 289 aaPredicted RBP22.51■■□□□ 1.19
ARPC1B-220ENST00000491294 MED23Q9ULK4 1368 aa22.5■■□□□ 1.19
ARPC1B-220ENST00000491294 WTIPA6NIX2 430 aaPredicted RBP22.5■■□□□ 1.19
ARPC1B-220ENST00000491294 RASSF10A6NK89 507 aa22.5■■□□□ 1.19
ARPC1B-220ENST00000491294 TRAF5O00463 557 aa22.5■■□□□ 1.19
ARPC1B-220ENST00000491294 DEFB115Q30KQ5 88 aa22.5■■□□□ 1.19
ARPC1B-220ENST00000491294 ABT1Q9ULW3 272 aaKnown RBP22.5■■□□□ 1.19
ARPC1B-220ENST00000491294 HSPA1AP0DMV8 641 aaKnown RBP22.49■■□□□ 1.19
ARPC1B-220ENST00000491294 HSPA1BP0DMV9 641 aaKnown RBP22.49■■□□□ 1.19
ARPC1B-220ENST00000491294 VEGFBP49765 207 aa22.49■■□□□ 1.19
ARPC1B-220ENST00000491294 IFIT5Q13325 482 aaKnown RBP22.49■■□□□ 1.19
ARPC1B-220ENST00000491294 CDC37L1Q7L3B6 337 aa22.49■■□□□ 1.19
ARPC1B-220ENST00000491294 GLIS2Q9BZE0 524 aaPredicted RBP22.49■■□□□ 1.19
ARPC1B-220ENST00000491294 CHMP3Q9Y3E7 222 aa22.49■■□□□ 1.19
ARPC1B-220ENST00000491294 SCN9AQ15858 1988 aa22.49■■□□□ 1.19
ARPC1B-220ENST00000491294 TBC1D10BQ4KMP7 808 aaPredicted RBP22.48■■□□□ 1.19
ARPC1B-220ENST00000491294 CST9Q5W186 159 aa22.48■■□□□ 1.19
ARPC1B-220ENST00000491294 RSBN1LQ6PCB5 846 aaPredicted RBP22.48■■□□□ 1.19
ARPC1B-220ENST00000491294 AGBL3Q8NEM8 1001 aa22.48■■□□□ 1.19
ARPC1B-220ENST00000491294 CDCA7LQ96GN5 454 aa22.48■■□□□ 1.19
ARPC1B-220ENST00000491294 USP17L3A6NCW0 530 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 USP17L4A6NCW7 530 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 CHRNDQ07001 517 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 EPHA10Q5JZY3 1008 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 RBM26Q5T8P6 1007 aaKnown RBP22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 LMBR1LQ6UX01 489 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 USP17L1Q7RTZ2 530 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 SSH1Q8WYL5 1049 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 ZNF804BA4D1E1 1349 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 PTPRCP08575 1304 aa22.47■■□□□ 1.19
ARPC1B-220ENST00000491294 TRMT2AQ8IZ69 625 aaKnown RBP22.46■■□□□ 1.19
ARPC1B-220ENST00000491294 COA1Q9GZY4 146 aa22.46■■□□□ 1.19
ARPC1B-220ENST00000491294 ZNF609O15014 1411 aa22.46■■□□□ 1.19
ARPC1B-220ENST00000491294 SPEF2Q9C093 1822 aa22.45■■□□□ 1.19
ARPC1B-220ENST00000491294 CELF2O95319 508 aaKnown RBP22.45■■□□□ 1.18
ARPC1B-220ENST00000491294 EGFRP00533 1210 aa22.45■■□□□ 1.18
ARPC1B-220ENST00000491294 CCDC57Q2TAC2 916 aa22.45■■□□□ 1.18
ARPC1B-220ENST00000491294 KIF4BQ2VIQ3 1234 aa22.45■■□□□ 1.18
ARPC1B-220ENST00000491294 KCNJ4P48050 445 aa22.44■■□□□ 1.18
ARPC1B-220ENST00000491294 ZNF280AP59817 542 aaPredicted RBP22.44■■□□□ 1.18
ARPC1B-220ENST00000491294 ALDH1L2Q3SY69 923 aa22.44■■□□□ 1.18
ARPC1B-220ENST00000491294 USP48Q86UV5 1035 aa22.44■■□□□ 1.18
ARPC1B-220ENST00000491294 TXNRD3Q86VQ6 643 aa22.44■■□□□ 1.18
ARPC1B-220ENST00000491294 GMLQ99445 158 aa22.44■■□□□ 1.18
ARPC1B-220ENST00000491294 TLL2Q9Y6L7 1015 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms