RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 DDIT3P35638 169 aa27.73■■■□□ 2.03
USF3-203ENST00000491165 ATG9AQ7Z3C6 839 aa27.73■■■□□ 2.03
USF3-203ENST00000491165 SASH1O94885 1247 aa27.73■■■□□ 2.03
USF3-203ENST00000491165 FAM43AQ8N2R8 423 aa27.73■■■□□ 2.03
USF3-203ENST00000491165 C10orf71Q711Q0 1435 aa27.72■■■□□ 2.03
USF3-203ENST00000491165 KIF13BQ9NQT8 1826 aa27.72■■■□□ 2.03
USF3-203ENST00000491165 TBC1D9Q6ZT07 1266 aa27.72■■■□□ 2.03
USF3-203ENST00000491165 DDX11L8A8MPP1 907 aa27.71■■■□□ 2.03
USF3-203ENST00000491165 CACNA1SQ13698 1873 aa27.7■■■□□ 2.02
USF3-203ENST00000491165 SOCS7O14512 581 aa27.7■■■□□ 2.02
USF3-203ENST00000491165 TRAK2O60296 914 aa27.7■■■□□ 2.02
USF3-203ENST00000491165 TAF7LQ5H9L4 462 aa27.7■■■□□ 2.02
USF3-203ENST00000491165 GOLGA6L3A6NEY3 463 aa27.69■■■□□ 2.02
USF3-203ENST00000491165 SRGNP10124 158 aa27.69■■■□□ 2.02
USF3-203ENST00000491165 LDHAL6AQ6ZMR3 332 aa27.69■■■□□ 2.02
USF3-203ENST00000491165 KIF2CQ99661 725 aa27.69■■■□□ 2.02
USF3-203ENST00000491165 IL1RAPL2Q9NP60 686 aa27.69■■■□□ 2.02
USF3-203ENST00000491165 CIZ1Q9ULV3 898 aaPredicted RBP27.69■■■□□ 2.02
USF3-203ENST00000491165 EYA2O00167 538 aa27.68■■■□□ 2.02
USF3-203ENST00000491165 RHPN1Q8TCX5 695 aa27.68■■■□□ 2.02
USF3-203ENST00000491165 G3BP1Q13283 466 aaKnown RBP eCLIP27.68■■■□□ 2.02
USF3-203ENST00000491165 RIPOR2Q9Y4F9 1068 aa27.68■■■□□ 2.02
USF3-203ENST00000491165 A0A1B0GUL6 1792 aa27.67■■■□□ 2.02
USF3-203ENST00000491165 FSD2A1L4K1 749 aa27.67■■■□□ 2.02
USF3-203ENST00000491165 POLD1P28340 1107 aa27.67■■■□□ 2.02
USF3-203ENST00000491165 CHRNA5P30532 468 aa27.67■■■□□ 2.02
USF3-203ENST00000491165 OS9Q13438 667 aaPredicted RBP27.67■■■□□ 2.02
USF3-203ENST00000491165 DDX46Q7L014 1031 aaKnown RBP27.67■■■□□ 2.02
USF3-203ENST00000491165 KIAA1551Q9HCM1 1747 aa27.67■■■□□ 2.02
USF3-203ENST00000491165 CDC45O75419 566 aa27.67■■■□□ 2.02
USF3-203ENST00000491165 PDE6BP35913 854 aa27.67■■■□□ 2.02
USF3-203ENST00000491165 RPGRQ92834 1020 aaKnown RBP27.67■■■□□ 2.02
USF3-203ENST00000491165 C16orf71Q8IYS4 520 aaPredicted RBP27.66■■■□□ 2.02
USF3-203ENST00000491165 LRRCC1Q9C099 1032 aa27.66■■■□□ 2.02
USF3-203ENST00000491165 CDC5LQ99459 802 aaKnown RBP27.65■■■□□ 2.02
USF3-203ENST00000491165 GZF1Q9H116 711 aaPredicted RBP27.65■■■□□ 2.02
USF3-203ENST00000491165 EIF5BO60841 1220 aaKnown RBP27.65■■■□□ 2.02
USF3-203ENST00000491165 HOXA10P31260 410 aaPredicted RBP27.65■■■□□ 2.02
USF3-203ENST00000491165 TFCP2Q12800 502 aa27.65■■■□□ 2.02
USF3-203ENST00000491165 RAB11FIP3O75154 756 aa27.64■■■□□ 2.02
USF3-203ENST00000491165 CIAO1O76071 339 aa27.64■■■□□ 2.02
USF3-203ENST00000491165 RPS8P62241 208 aaKnown RBP27.64■■■□□ 2.02
USF3-203ENST00000491165 ANKRD18AQ8IVF6 992 aa27.64■■■□□ 2.02
USF3-203ENST00000491165 KIF1BPQ96EK5 621 aa27.64■■■□□ 2.02
USF3-203ENST00000491165 MPHOSPH8Q99549 860 aa27.64■■■□□ 2.02
USF3-203ENST00000491165 CNNM1Q9NRU3 951 aa27.64■■■□□ 2.02
USF3-203ENST00000491165 GRAPQ13588 217 aa27.64■■■□□ 2.01
USF3-203ENST00000491165 GRAPLQ8TC17 118 aaPredicted RBP27.64■■■□□ 2.01
USF3-203ENST00000491165 OTUD7AQ8TE49 926 aaPredicted RBP27.64■■■□□ 2.01
USF3-203ENST00000491165 DLEC1Q9Y238 1755 aa27.63■■■□□ 2.01
USF3-203ENST00000491165 IGHMBP2P38935 993 aaKnown RBP27.63■■■□□ 2.01
USF3-203ENST00000491165 HSP90AB4PQ58FF6 505 aa27.63■■■□□ 2.01
USF3-203ENST00000491165 C2CD5Q86YS7 1000 aa27.63■■■□□ 2.01
USF3-203ENST00000491165 IL15P40933 162 aaPredicted RBP27.62■■■□□ 2.01
USF3-203ENST00000491165 HELBQ8NG08 1087 aaPredicted RBP27.62■■■□□ 2.01
USF3-203ENST00000491165 BSDC1Q9NW68 430 aaPredicted RBP27.62■■■□□ 2.01
USF3-203ENST00000491165 PLEKHM2Q8IWE5 1019 aa27.61■■■□□ 2.01
USF3-203ENST00000491165 VGLL2Q8N8G2 317 aa27.61■■■□□ 2.01
USF3-203ENST00000491165 RBM17Q96I25 401 aaKnown RBP27.61■■■□□ 2.01
USF3-203ENST00000491165 FBXO3Q9UK99 471 aa27.61■■■□□ 2.01
USF3-203ENST00000491165 SLX4Q8IY92 1834 aa27.61■■■□□ 2.01
USF3-203ENST00000491165 K7ELQ4 463 aaPredicted RBP27.61■■■□□ 2.01
USF3-203ENST00000491165 SNAP23O00161 211 aa27.61■■■□□ 2.01
USF3-203ENST00000491165 XRCC6P12956 609 aaKnown RBP eCLIP27.61■■■□□ 2.01
USF3-203ENST00000491165 GSPT1P15170 499 aaKnown RBP27.61■■■□□ 2.01
USF3-203ENST00000491165 TNPO1Q92973 898 aaKnown RBP27.61■■■□□ 2.01
USF3-203ENST00000491165 WTIPA6NIX2 430 aaPredicted RBP27.6■■■□□ 2.01
USF3-203ENST00000491165 NPR1P16066 1061 aa27.6■■■□□ 2.01
USF3-203ENST00000491165 MASTLQ96GX5 879 aa27.6■■■□□ 2.01
USF3-203ENST00000491165 SPON1Q9HCB6 807 aa27.6■■■□□ 2.01
USF3-203ENST00000491165 H0YIN7 160 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 TAF5LO75529 589 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 HSP90AA1P07900 732 aaKnown RBP27.59■■■□□ 2.01
USF3-203ENST00000491165 KCNA3P22001 575 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 RAB3GAP1Q15042 981 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 ERC1Q8IUD2 1116 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 EAF2Q96CJ1 260 aaPredicted RBP27.59■■■□□ 2.01
USF3-203ENST00000491165 GBP4Q96PP9 640 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 CRAMP1Q96RY5 1269 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 A0A0G2JLW4 131 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 ZNF622Q969S3 477 aaKnown RBP eCLIP27.59■■■□□ 2.01
USF3-203ENST00000491165 PPP1R1BQ9UD71 204 aaPredicted RBP27.59■■■□□ 2.01
USF3-203ENST00000491165 MINPP1Q9UNW1 487 aa27.59■■■□□ 2.01
USF3-203ENST00000491165 CD2BP2O95400 341 aaKnown RBP27.58■■■□□ 2.01
USF3-203ENST00000491165 CHRNDQ07001 517 aa27.58■■■□□ 2.01
USF3-203ENST00000491165 METTL24Q5JXM2 366 aa27.58■■■□□ 2.01
USF3-203ENST00000491165 TTC22Q5TAA0 569 aa27.58■■■□□ 2.01
USF3-203ENST00000491165 OLFM4Q6UX06 510 aa27.58■■■□□ 2.01
USF3-203ENST00000491165 TLR7Q9NYK1 1049 aaKnown RBP27.58■■■□□ 2.01
USF3-203ENST00000491165 LRRC37AA6NMS7 1700 aa27.57■■■□□ 2
USF3-203ENST00000491165 DPEP1P16444 411 aa27.57■■■□□ 2
USF3-203ENST00000491165 BRCA1P38398 1863 aaKnown RBP27.56■■■□□ 2
USF3-203ENST00000491165 KLHL34Q8N239 644 aa27.56■■■□□ 2
USF3-203ENST00000491165 TNNI3KQ59H18 835 aa27.56■■■□□ 2
USF3-203ENST00000491165 FPGT-TNNI3KV9GXZ4 949 aa27.56■■■□□ 2
USF3-203ENST00000491165 SALL3Q9BXA9 1300 aa27.56■■■□□ 2
USF3-203ENST00000491165 TIMM10P62072 90 aa27.55■■■□□ 2
USF3-203ENST00000491165 CEP126Q9P2H0 1117 aa27.55■■■□□ 2
USF3-203ENST00000491165 MROH5Q6ZUA9 1318 aa27.55■■■□□ 2
USF3-203ENST00000491165 PDE8BO95263 885 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms