RNA–Protein interactions for RNA: ENST00000491073.5

PDPK1-212, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best)

Gene PDPK1, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-212ENST00000491073 RPAP1Q9BWH6 1393 aaPredicted RBP20.48■□□□□ 0.87
PDPK1-212ENST00000491073 RREB1Q92766 1687 aa20.48■□□□□ 0.87
PDPK1-212ENST00000491073 CAMTA2O94983 1202 aa20.48■□□□□ 0.87
PDPK1-212ENST00000491073 VPS53Q5VIR6 699 aa20.48■□□□□ 0.87
PDPK1-212ENST00000491073 XAGE2Q96GT9 111 aa20.48■□□□□ 0.87
PDPK1-212ENST00000491073 NGLY1Q96IV0 654 aa20.48■□□□□ 0.87
PDPK1-212ENST00000491073 MYH3P11055 1940 aa20.47■□□□□ 0.87
PDPK1-212ENST00000491073 HCLS1P14317 486 aaPredicted RBP20.47■□□□□ 0.87
PDPK1-212ENST00000491073 FAM182BQ5T319 152 aa20.47■□□□□ 0.87
PDPK1-212ENST00000491073 INTS4Q96HW7 963 aaKnown RBP20.46■□□□□ 0.87
PDPK1-212ENST00000491073 HSP90AB3PQ58FF7 597 aa20.46■□□□□ 0.87
PDPK1-212ENST00000491073 MCTP1Q6DN14 999 aa20.46■□□□□ 0.87
PDPK1-212ENST00000491073 TM6SF1Q9BZW5 370 aa20.46■□□□□ 0.87
PDPK1-212ENST00000491073 COL4A1P02462 1669 aa20.46■□□□□ 0.87
PDPK1-212ENST00000491073 IFIT1P09914 478 aaKnown RBP20.45■□□□□ 0.86
PDPK1-212ENST00000491073 KCNJ4P48050 445 aa20.45■□□□□ 0.86
PDPK1-212ENST00000491073 USPL1Q5W0Q7 1092 aa20.45■□□□□ 0.86
PDPK1-212ENST00000491073 VGLL2Q8N8G2 317 aa20.45■□□□□ 0.86
PDPK1-212ENST00000491073 PDRG1Q9NUG6 133 aa20.45■□□□□ 0.86
PDPK1-212ENST00000491073 BRD1O95696 1058 aa20.45■□□□□ 0.86
PDPK1-212ENST00000491073 LIMCH1Q9UPQ0 1083 aa20.45■□□□□ 0.86
PDPK1-212ENST00000491073 VPS72Q15906 364 aa20.44■□□□□ 0.86
PDPK1-212ENST00000491073 LINC00116Q8NCU8 138 aa20.44■□□□□ 0.86
PDPK1-212ENST00000491073 SNAP23O00161 211 aa20.44■□□□□ 0.86
PDPK1-212ENST00000491073 TAF7LQ5H9L4 462 aa20.44■□□□□ 0.86
PDPK1-212ENST00000491073 LDHAL6AQ6ZMR3 332 aa20.44■□□□□ 0.86
PDPK1-212ENST00000491073 LMBRD1Q9NUN5 540 aa20.44■□□□□ 0.86
PDPK1-212ENST00000491073 MCMDC2Q4G0Z9 681 aa20.43■□□□□ 0.86
PDPK1-212ENST00000491073 CYP46A1Q9Y6A2 500 aa20.43■□□□□ 0.86
PDPK1-212ENST00000491073 PDE8AO60658 829 aa20.43■□□□□ 0.86
PDPK1-212ENST00000491073 ME3Q16798 604 aa20.43■□□□□ 0.86
PDPK1-212ENST00000491073 NECAB1Q8N987 351 aa20.43■□□□□ 0.86
PDPK1-212ENST00000491073 HELBQ8NG08 1087 aaPredicted RBP20.43■□□□□ 0.86
PDPK1-212ENST00000491073 TPCN1Q9ULQ1 816 aa20.43■□□□□ 0.86
PDPK1-212ENST00000491073 RFX7Q2KHR2 1363 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 EP400Q96L91 3159 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 ZMYM1Q5SVZ6 1142 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 SEC31BQ9NQW1 1179 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 COL5A3P25940 1745 aaPredicted RBP20.42■□□□□ 0.86
PDPK1-212ENST00000491073 M0R2C6 588 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 CYP21A2P08686 494 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.86
PDPK1-212ENST00000491073 METTL24Q5JXM2 366 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 STOX1Q6ZVD7 989 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 FBXO3Q9UK99 471 aa20.42■□□□□ 0.86
PDPK1-212ENST00000491073 AKAP11Q9UKA4 1901 aa20.41■□□□□ 0.86
PDPK1-212ENST00000491073 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
PDPK1-212ENST00000491073 FSD2A1L4K1 749 aa20.41■□□□□ 0.86
PDPK1-212ENST00000491073 ANKRD18BA2A2Z9 1011 aa20.41■□□□□ 0.86
PDPK1-212ENST00000491073 ZKSCAN1P17029 563 aaPredicted RBP20.41■□□□□ 0.86
PDPK1-212ENST00000491073 ZAP70P43403 619 aa20.41■□□□□ 0.86
PDPK1-212ENST00000491073 FNBP4Q8N3X1 1017 aaPredicted RBP20.41■□□□□ 0.86
PDPK1-212ENST00000491073 SH3TC1Q8TE82 1336 aa20.41■□□□□ 0.86
PDPK1-212ENST00000491073 FOXP2O15409 715 aa20.41■□□□□ 0.86
PDPK1-212ENST00000491073 TOB2Q14106 344 aaPredicted RBP20.41■□□□□ 0.86
PDPK1-212ENST00000491073 CCDC83Q8IWF9 413 aa20.41■□□□□ 0.86
PDPK1-212ENST00000491073 MAST3O60307 1309 aa20.41■□□□□ 0.86
PDPK1-212ENST00000491073 DDX60Q8IY21 1712 aaKnown RBP20.4■□□□□ 0.86
PDPK1-212ENST00000491073 ATP2B3Q16720 1220 aa20.4■□□□□ 0.86
PDPK1-212ENST00000491073 TSGA10IPQ3SY00 556 aa20.4■□□□□ 0.86
PDPK1-212ENST00000491073 FOXD4L6Q3SYB3 417 aaPredicted RBP20.4■□□□□ 0.86
PDPK1-212ENST00000491073 FOXD4L3Q6VB84 417 aaPredicted RBP20.4■□□□□ 0.86
PDPK1-212ENST00000491073 GAS2L3Q86XJ1 694 aa20.4■□□□□ 0.86
PDPK1-212ENST00000491073 OSBP2Q969R2 916 aa20.4■□□□□ 0.86
PDPK1-212ENST00000491073 CNNM1Q9NRU3 951 aa20.39■□□□□ 0.86
PDPK1-212ENST00000491073 NSFL1CQ9UNZ2 370 aaKnown RBP20.39■□□□□ 0.86
PDPK1-212ENST00000491073 MYO5AQ9Y4I1 1855 aaKnown RBP20.39■□□□□ 0.85
PDPK1-212ENST00000491073 NTSR2O95665 410 aa20.39■□□□□ 0.85
PDPK1-212ENST00000491073 MCAMP43121 646 aa20.39■□□□□ 0.85
PDPK1-212ENST00000491073 TTC39AQ5SRH9 613 aa20.39■□□□□ 0.85
PDPK1-212ENST00000491073 AMIGO3Q86WK7 504 aa20.39■□□□□ 0.85
PDPK1-212ENST00000491073 RNF113AO15541 343 aaKnown RBP20.38■□□□□ 0.85
PDPK1-212ENST00000491073 RPS6KB1P23443 525 aa20.38■□□□□ 0.85
PDPK1-212ENST00000491073 C3orf67Q6ZVT6 689 aa20.38■□□□□ 0.85
PDPK1-212ENST00000491073 AKAP2Q9Y2D5 859 aa20.38■□□□□ 0.85
PDPK1-212ENST00000491073 PRPF40AO75400 957 aaKnown RBP20.38■□□□□ 0.85
PDPK1-212ENST00000491073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDPK1-212ENST00000491073 NIP7Q9Y221 180 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDPK1-212ENST00000491073 LRP5O75197 1615 aa20.38■□□□□ 0.85
PDPK1-212ENST00000491073 GORABQ5T7V8 394 aa20.37■□□□□ 0.85
PDPK1-212ENST00000491073 GPT2Q8TD30 523 aa20.37■□□□□ 0.85
PDPK1-212ENST00000491073 TTLL5Q6EMB2 1281 aa20.37■□□□□ 0.85
PDPK1-212ENST00000491073 UTP14AQ9BVJ6 771 aaKnown RBP20.37■□□□□ 0.85
PDPK1-212ENST00000491073 HELLSQ9NRZ9 838 aa20.37■□□□□ 0.85
PDPK1-212ENST00000491073 PDE8BO95263 885 aa20.36■□□□□ 0.85
PDPK1-212ENST00000491073 PHKA1P46020 1223 aa20.36■□□□□ 0.85
PDPK1-212ENST00000491073 CCDC158Q5M9N0 1113 aa20.36■□□□□ 0.85
PDPK1-212ENST00000491073 BLOC1S2Q6QNY1 142 aa20.36■□□□□ 0.85
PDPK1-212ENST00000491073 TCHHQ07283 1943 aa20.36■□□□□ 0.85
PDPK1-212ENST00000491073 LAMA4Q16363 1823 aa20.36■□□□□ 0.85
PDPK1-212ENST00000491073 WTIPA6NIX2 430 aaPredicted RBP20.36■□□□□ 0.85
PDPK1-212ENST00000491073 HSPD1P10809 573 aaKnown RBP20.36■□□□□ 0.85
PDPK1-212ENST00000491073 USP21Q9UK80 565 aa20.36■□□□□ 0.85
PDPK1-212ENST00000491073 SPEF2Q9C093 1822 aa20.35■□□□□ 0.85
PDPK1-212ENST00000491073 XRCC6P12956 609 aaKnown RBP eCLIP20.35■□□□□ 0.85
PDPK1-212ENST00000491073 SYT1P21579 422 aa20.35■□□□□ 0.85
PDPK1-212ENST00000491073 TAF1P21675 1872 aa20.35■□□□□ 0.85
PDPK1-212ENST00000491073 SMARCC1Q92922 1105 aaPredicted RBP20.35■□□□□ 0.85
PDPK1-212ENST00000491073 LRRC2Q9BYS8 371 aa20.35■□□□□ 0.85
PDPK1-212ENST00000491073 FGFR2P21802 821 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms