RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 RGPD5Q99666 1765 aa6.48□□□□□ -1.37
PTPRK-213ENST00000490332 FAM181BA6NEQ2 426 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 MMP10P09238 476 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 MAP2K2P36507 400 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 HDGFL2Q7Z4V5 671 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-213ENST00000490332 WWC1Q8IX03 1113 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 ZSCAN1Q8NBB4 408 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 SPRYD3Q8NCJ5 442 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 KIFC2Q96AC6 838 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 DDRGK1Q96HY6 314 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 CAPNS2Q96L46 248 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 MRGPRX2Q96LB1 330 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 GPR101Q96P66 508 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-213ENST00000490332 BACH2Q9BYV9 841 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 ABT1Q9ULW3 272 aaKnown RBP6.47□□□□□ -1.37
PTPRK-213ENST00000490332 SLC27A5Q9Y2P5 690 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 C4BP0C0L5 1744 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 DOT1LQ8TEK3 1739 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 CCDC88AQ3V6T2 1871 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 ACEP12821 1306 aa6.47□□□□□ -1.37
PTPRK-213ENST00000490332 IQCA1LA6NCM1 817 aa6.46□□□□□ -1.38
PTPRK-213ENST00000490332 PLIN1O60240 522 aa6.46□□□□□ -1.38
PTPRK-213ENST00000490332 FMNL1O95466 1100 aaPredicted RBP6.46□□□□□ -1.38
PTPRK-213ENST00000490332 MTHFSP49914 203 aa6.46□□□□□ -1.38
PTPRK-213ENST00000490332 FUT2Q10981 343 aa6.46□□□□□ -1.38
PTPRK-213ENST00000490332 SUZ12Q15022 739 aaKnown RBP6.46□□□□□ -1.38
PTPRK-213ENST00000490332 NUDT16Q96DE0 195 aaKnown RBP6.46□□□□□ -1.38
PTPRK-213ENST00000490332 TOGARAM1Q9Y4F4 1720 aa6.46□□□□□ -1.38
PTPRK-213ENST00000490332 SCN4AP35499 1836 aa6.46□□□□□ -1.38
PTPRK-213ENST00000490332 SRPK2P78362 688 aaKnown RBP6.45□□□□□ -1.38
PTPRK-213ENST00000490332 BRICD5Q6PL45 260 aa6.45□□□□□ -1.38
PTPRK-213ENST00000490332 CCDC146Q8IYE0 955 aa6.45□□□□□ -1.38
PTPRK-213ENST00000490332 NXF1Q9UBU9 619 aaKnown RBP6.45□□□□□ -1.38
PTPRK-213ENST00000490332 IL16Q14005 1332 aa6.45□□□□□ -1.38
PTPRK-213ENST00000490332 MKI67P46013 3256 aaKnown RBP6.45□□□□□ -1.38
PTPRK-213ENST00000490332 MEGF6O75095 1541 aa6.45□□□□□ -1.38
PTPRK-213ENST00000490332 DICER1Q9UPY3 1922 aaKnown RBP6.44□□□□□ -1.38
PTPRK-213ENST00000490332 PLEKHG3A1L390 1219 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 ZBTB24O43167 697 aaPredicted RBP6.44□□□□□ -1.38
PTPRK-213ENST00000490332 OATP04181 439 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 NEFMP07197 916 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 KCNA3P22001 575 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 CANXP27824 592 aaKnown RBP6.44□□□□□ -1.38
PTPRK-213ENST00000490332 ATP6V1AP38606 617 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 BRPF1P55201 1214 aaPredicted RBP6.44□□□□□ -1.38
PTPRK-213ENST00000490332 TRIM32Q13049 653 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 MSS51Q4VC12 460 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 PAXIP1Q6ZW49 1069 aaPredicted RBP6.44□□□□□ -1.38
PTPRK-213ENST00000490332 METTL3Q86U44 580 aaKnown RBP6.44□□□□□ -1.38
PTPRK-213ENST00000490332 ARHGEF25Q86VW2 580 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 NLGN1Q8N2Q7 840 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 KCNH5Q8NCM2 988 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 C4AP0C0L4 1744 aa6.44□□□□□ -1.38
PTPRK-213ENST00000490332 CEP290O15078 2479 aa6.43□□□□□ -1.38
PTPRK-213ENST00000490332 PPM1GO15355 546 aaPredicted RBP6.43□□□□□ -1.38
PTPRK-213ENST00000490332 U2AF1L5P0DN76 240 aaPredicted RBP6.43□□□□□ -1.38
PTPRK-213ENST00000490332 U2AF1Q01081 240 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPRK-213ENST00000490332 RASSF7Q02833 373 aa6.43□□□□□ -1.38
PTPRK-213ENST00000490332 ZNF428Q96B54 188 aa6.43□□□□□ -1.38
PTPRK-213ENST00000490332 CHMP4BQ9H444 224 aaKnown RBP6.43□□□□□ -1.38
PTPRK-213ENST00000490332 CACNA1AO00555 2505 aa6.42□□□□□ -1.38
PTPRK-213ENST00000490332 CALD1Q05682 793 aaKnown RBP6.42□□□□□ -1.38
PTPRK-213ENST00000490332 RNF19BQ6ZMZ0 732 aa6.42□□□□□ -1.38
PTPRK-213ENST00000490332 DDX54Q8TDD1 881 aaKnown RBP6.42□□□□□ -1.38
PTPRK-213ENST00000490332 CDK19Q9BWU1 502 aa6.42□□□□□ -1.38
PTPRK-213ENST00000490332 RWDD1Q9H446 243 aaPredicted RBP6.42□□□□□ -1.38
PTPRK-213ENST00000490332 NLRP2Q9NX02 1062 aa6.42□□□□□ -1.38
PTPRK-213ENST00000490332 DAXXQ9UER7 740 aaPredicted RBP6.42□□□□□ -1.38
PTPRK-213ENST00000490332 PARP3Q9Y6F1 533 aa6.42□□□□□ -1.38
PTPRK-213ENST00000490332 MAPK8IP3Q9UPT6 1336 aa6.42□□□□□ -1.38
PTPRK-213ENST00000490332 PALLDQ8WX93 1383 aa6.42□□□□□ -1.38
PTPRK-213ENST00000490332 FYB1O15117 783 aa6.41□□□□□ -1.38
PTPRK-213ENST00000490332 IPO8O15397 1037 aaKnown RBP6.41□□□□□ -1.38
PTPRK-213ENST00000490332 DIAPH1O60610 1272 aaKnown RBP6.41□□□□□ -1.38
PTPRK-213ENST00000490332 BCAR3O75815 825 aa6.41□□□□□ -1.38
PTPRK-213ENST00000490332 TNNT2P45379 298 aaPredicted RBP6.41□□□□□ -1.38
PTPRK-213ENST00000490332 RARSP54136 660 aaKnown RBP6.41□□□□□ -1.38
PTPRK-213ENST00000490332 C20orf194Q5TEA3 1177 aa6.41□□□□□ -1.38
PTPRK-213ENST00000490332 NPAS3Q8IXF0 933 aa6.41□□□□□ -1.38
PTPRK-213ENST00000490332 ARHGEF1Q92888 912 aaKnown RBP6.41□□□□□ -1.38
PTPRK-213ENST00000490332 CLUAP1Q96AJ1 413 aa6.41□□□□□ -1.38
PTPRK-213ENST00000490332 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
PTPRK-213ENST00000490332 TRPM7Q96QT4 1865 aa6.41□□□□□ -1.38
PTPRK-213ENST00000490332 H3BM21 787 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 FECHP22830 423 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 TMPOP42166 694 aaKnown RBP6.4□□□□□ -1.38
PTPRK-213ENST00000490332 GCGRP47871 477 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 GRM1Q13255 1194 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 NEUROD2Q15784 382 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 PKN2Q16513 984 aaKnown RBP6.4□□□□□ -1.38
PTPRK-213ENST00000490332 RTL5Q5HYW3 569 aaPredicted RBP6.4□□□□□ -1.38
PTPRK-213ENST00000490332 ZKSCAN2Q63HK3 967 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 CYP4F22Q6NT55 531 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 SMIM5Q71RC9 77 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 AMIGO3Q86WK7 504 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 RDH13Q8NBN7 331 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 SMARCC1Q92922 1105 aaPredicted RBP6.4□□□□□ -1.38
PTPRK-213ENST00000490332 IRF7Q92985 503 aa6.4□□□□□ -1.38
PTPRK-213ENST00000490332 TAF1DQ9H5J8 278 aaPredicted RBP6.4□□□□□ -1.38
PTPRK-213ENST00000490332 A0A1W2PP64 1363 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms