RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
TMEM39A-210ENST00000490099 GMPSP49915 693 aaPredicted RBP12.47□□□□□ -0.41
TMEM39A-210ENST00000490099 EXOSC9Q06265 439 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-210ENST00000490099 TNIP1Q15025 636 aa12.47□□□□□ -0.41
TMEM39A-210ENST00000490099 WASHC4Q2M389 1173 aa12.47□□□□□ -0.41
TMEM39A-210ENST00000490099 CWF19L2Q2TBE0 894 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-210ENST00000490099 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-210ENST00000490099 CACNA1FO60840 1977 aa12.47□□□□□ -0.41
TMEM39A-210ENST00000490099 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.41
TMEM39A-210ENST00000490099 CTSWP56202 376 aa12.46□□□□□ -0.41
TMEM39A-210ENST00000490099 NEXNQ0ZGT2 675 aa12.46□□□□□ -0.41
TMEM39A-210ENST00000490099 GCKRQ14397 625 aa12.46□□□□□ -0.41
TMEM39A-210ENST00000490099 LINS1Q8NG48 757 aa12.46□□□□□ -0.41
TMEM39A-210ENST00000490099 DPF2Q92785 391 aa12.46□□□□□ -0.41
TMEM39A-210ENST00000490099 CNTNAP1P78357 1384 aa12.45□□□□□ -0.42
TMEM39A-210ENST00000490099 RAD17O75943 681 aa12.45□□□□□ -0.42
TMEM39A-210ENST00000490099 CSF1RP07333 972 aa12.45□□□□□ -0.42
TMEM39A-210ENST00000490099 HIRAP54198 1017 aaPredicted RBP12.45□□□□□ -0.42
TMEM39A-210ENST00000490099 ZC3H15Q8WU90 426 aaKnown RBP12.45□□□□□ -0.42
TMEM39A-210ENST00000490099 DNAAF4Q8WXU2 420 aa12.45□□□□□ -0.42
TMEM39A-210ENST00000490099 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
TMEM39A-210ENST00000490099 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
TMEM39A-210ENST00000490099 RASSF10A6NK89 507 aa12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 EYA3Q99504 573 aa12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 GREM2Q9H772 168 aa12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 KCNQ5Q9NR82 932 aa12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 CNOT7Q9UIV1 285 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-210ENST00000490099 PSMD14O00487 310 aa12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 RPS12P25398 132 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 FKBP5Q13451 457 aaPredicted RBP12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 BEND3Q5T5X7 828 aa12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 CST9Q5W186 159 aa12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 CDC5LQ99459 802 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 ZC3H12CQ9C0D7 883 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 ZNF609O15014 1411 aa12.43□□□□□ -0.42
TMEM39A-210ENST00000490099 XDHP47989 1333 aa12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 RIMBP2O15034 1052 aa12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 GPR101Q96P66 508 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 DBNDD1Q9H9R9 158 aa12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 GGA1Q9UJY5 639 aa12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
TMEM39A-210ENST00000490099 SHTN1A0MZ66 631 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 ECE2O60344 883 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 UFL1O94874 794 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 VEGFBP49765 207 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 TRPM4Q8TD43 1214 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 GMLQ99445 158 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
TMEM39A-210ENST00000490099 H7C1D1 291 aa12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 TRAF5O00463 557 aa12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 ZNF280AP59817 542 aaPredicted RBP12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 FOXO4P98177 505 aa12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 PODNQ7Z5L7 613 aa12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 MICALL2Q8IY33 904 aa12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 PCNTO95613 3336 aa12.4□□□□□ -0.42
TMEM39A-210ENST00000490099 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
TMEM39A-210ENST00000490099 F6X3S4 739 aa12.39□□□□□ -0.43
TMEM39A-210ENST00000490099 EGFRP00533 1210 aa12.39□□□□□ -0.43
TMEM39A-210ENST00000490099 ITGA6P23229 1130 aa12.39□□□□□ -0.43
TMEM39A-210ENST00000490099 DEFB115Q30KQ5 88 aa12.39□□□□□ -0.43
TMEM39A-210ENST00000490099 COL13A1Q5TAT6 717 aaPredicted RBP12.39□□□□□ -0.43
TMEM39A-210ENST00000490099 TRMT2AQ8IZ69 625 aaKnown RBP12.39□□□□□ -0.43
TMEM39A-210ENST00000490099 LEMD3Q9Y2U8 911 aa12.39□□□□□ -0.43
TMEM39A-210ENST00000490099 ALDH1L1O75891 902 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 SLFN5Q08AF3 891 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 CDC37L1Q7L3B6 337 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 HHIPL1Q96JK4 782 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 GLIS2Q9BZE0 524 aaPredicted RBP12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 MYH3P11055 1940 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 MED23Q9ULK4 1368 aa12.38□□□□□ -0.43
TMEM39A-210ENST00000490099 IRS2Q9Y4H2 1338 aa12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 E9PSI1 815 aa12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 GRM8O00222 908 aa12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 CCT4P50991 539 aaKnown RBP12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 RSBN1LQ6PCB5 846 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms