RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 PGAP2Q9UHJ9 254 aa15.2■□□□□ 0.02
SRSF4-204ENST00000489898 F6X3S4 739 aa15.19■□□□□ 0.02
SRSF4-204ENST00000489898 FAM161AQ3B820 660 aa15.19■□□□□ 0.02
SRSF4-204ENST00000489898 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
SRSF4-204ENST00000489898 UBE3BQ7Z3V4 1068 aa15.19■□□□□ 0.02
SRSF4-204ENST00000489898 PNMA8AQ86V59 439 aaPredicted RBP15.19■□□□□ 0.02
SRSF4-204ENST00000489898 FAM9BQ8IZU0 186 aa15.19■□□□□ 0.02
SRSF4-204ENST00000489898 DNAAF4Q8WXU2 420 aa15.19■□□□□ 0.02
SRSF4-204ENST00000489898 MED23Q9ULK4 1368 aa15.19■□□□□ 0.02
SRSF4-204ENST00000489898 TRAF5O00463 557 aa15.18■□□□□ 0.02
SRSF4-204ENST00000489898 PSMD14O00487 310 aa15.18■□□□□ 0.02
SRSF4-204ENST00000489898 ECE2O60344 883 aa15.18■□□□□ 0.02
SRSF4-204ENST00000489898 CSF1RP07333 972 aa15.18■□□□□ 0.02
SRSF4-204ENST00000489898 CCDC152Q4G0S7 254 aa15.18■□□□□ 0.02
SRSF4-204ENST00000489898 CIAPIN1Q6FI81 312 aa15.18■□□□□ 0.02
SRSF4-204ENST00000489898 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
SRSF4-204ENST00000489898 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
SRSF4-204ENST00000489898 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
SRSF4-204ENST00000489898 NSFL1CQ9UNZ2 370 aaKnown RBP15.18■□□□□ 0.02
SRSF4-204ENST00000489898 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
SRSF4-204ENST00000489898 HTTP42858 3142 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 RASSF10A6NK89 507 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 KLRK1P26718 216 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 FOXO4P98177 505 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 EPHA10Q5JZY3 1008 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 CST9Q5W186 159 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 CNTROBQ8N137 903 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 LINS1Q8NG48 757 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 KAZALD1Q96I82 304 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 GMLQ99445 158 aa15.17■□□□□ 0.02
SRSF4-204ENST00000489898 FKBP5Q13451 457 aaPredicted RBP15.16■□□□□ 0.02
SRSF4-204ENST00000489898 WASHC4Q2M389 1173 aa15.16■□□□□ 0.02
SRSF4-204ENST00000489898 TXNRD3Q86VQ6 643 aa15.16■□□□□ 0.02
SRSF4-204ENST00000489898 TRMT2AQ8IZ69 625 aaKnown RBP15.16■□□□□ 0.02
SRSF4-204ENST00000489898 MKRN1Q9UHC7 482 aaKnown RBP15.16■□□□□ 0.02
SRSF4-204ENST00000489898 XDHP47989 1333 aa15.16■□□□□ 0.02
SRSF4-204ENST00000489898 UFL1O94874 794 aa15.15■□□□□ 0.02
SRSF4-204ENST00000489898 DLK2Q6UY11 383 aa15.15■□□□□ 0.02
SRSF4-204ENST00000489898 MINPP1Q9UNW1 487 aa15.15■□□□□ 0.02
SRSF4-204ENST00000489898 ASTN2O75129 1339 aaPredicted RBP15.15■□□□□ 0.02
SRSF4-204ENST00000489898 TMEM88BA6NKF7 163 aa15.14■□□□□ 0.01
SRSF4-204ENST00000489898 RIMBP2O15034 1052 aa15.14■□□□□ 0.01
SRSF4-204ENST00000489898 HSPA1AP0DMV8 641 aaKnown RBP15.14■□□□□ 0.01
SRSF4-204ENST00000489898 HSPA1BP0DMV9 641 aaKnown RBP15.14■□□□□ 0.01
SRSF4-204ENST00000489898 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
SRSF4-204ENST00000489898 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
SRSF4-204ENST00000489898 UTYO14607 1347 aa15.14■□□□□ 0.01
SRSF4-204ENST00000489898 VIL1P09327 827 aaKnown RBP15.13■□□□□ 0.01
SRSF4-204ENST00000489898 LMOD1P29536 600 aaPredicted RBP15.13■□□□□ 0.01
SRSF4-204ENST00000489898 VEGFBP49765 207 aa15.13■□□□□ 0.01
SRSF4-204ENST00000489898 COL13A1Q5TAT6 717 aaPredicted RBP15.13■□□□□ 0.01
SRSF4-204ENST00000489898 DPF2Q92785 391 aa15.13■□□□□ 0.01
SRSF4-204ENST00000489898 CHMP4AQ9BY43 222 aa15.13■□□□□ 0.01
SRSF4-204ENST00000489898 GLIS2Q9BZE0 524 aaPredicted RBP15.13■□□□□ 0.01
SRSF4-204ENST00000489898 BSDC1Q9NW68 430 aaPredicted RBP15.13■□□□□ 0.01
SRSF4-204ENST00000489898 C6orf229H3BNL8 230 aa15.12■□□□□ 0.01
SRSF4-204ENST00000489898 SLFN5Q08AF3 891 aa15.12■□□□□ 0.01
SRSF4-204ENST00000489898 NEXNQ0ZGT2 675 aa15.12■□□□□ 0.01
SRSF4-204ENST00000489898 SAMD7Q7Z3H4 446 aa15.12■□□□□ 0.01
SRSF4-204ENST00000489898 ANKRD18AQ8IVF6 992 aa15.12■□□□□ 0.01
SRSF4-204ENST00000489898 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
SRSF4-204ENST00000489898 CDCA7LQ96GN5 454 aa15.12■□□□□ 0.01
SRSF4-204ENST00000489898 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
SRSF4-204ENST00000489898 GGA1Q9UJY5 639 aa15.12■□□□□ 0.01
SRSF4-204ENST00000489898 SNAP23O00161 211 aa15.11■□□□□ 0.01
SRSF4-204ENST00000489898 ITGA6P23229 1130 aa15.11■□□□□ 0.01
SRSF4-204ENST00000489898 ZNF280AP59817 542 aaPredicted RBP15.11■□□□□ 0.01
SRSF4-204ENST00000489898 IFFO2Q5TF58 517 aa15.11■□□□□ 0.01
SRSF4-204ENST00000489898 CNOT7Q9UIV1 285 aaKnown RBP15.11■□□□□ 0.01
SRSF4-204ENST00000489898 AKAP11Q9UKA4 1901 aa15.11■□□□□ 0.01
SRSF4-204ENST00000489898 SSC5DA1L4H1 1573 aa15.11■□□□□ 0.01
SRSF4-204ENST00000489898 HSP90B1P14625 803 aaKnown RBP15.1■□□□□ 0.01
SRSF4-204ENST00000489898 CCT4P50991 539 aaKnown RBP15.1■□□□□ 0.01
SRSF4-204ENST00000489898 TNIP1Q15025 636 aa15.1■□□□□ 0.01
SRSF4-204ENST00000489898 DACT2Q5SW24 774 aa15.1■□□□□ 0.01
SRSF4-204ENST00000489898 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
SRSF4-204ENST00000489898 EYA3Q99504 573 aa15.1■□□□□ 0.01
SRSF4-204ENST00000489898 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
SRSF4-204ENST00000489898 TLL2Q9Y6L7 1015 aa15.1■□□□□ 0.01
SRSF4-204ENST00000489898 TNRC18O15417 2968 aaPredicted RBP15.1■□□□□ 0.01
SRSF4-204ENST00000489898 GRM8O00222 908 aa15.09■□□□□ 0.01
SRSF4-204ENST00000489898 RPS12P25398 132 aaKnown RBP15.09■□□□□ 0.01
SRSF4-204ENST00000489898 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
SRSF4-204ENST00000489898 SSH1Q8WYL5 1049 aa15.09■□□□□ 0.01
SRSF4-204ENST00000489898 MXD3Q9BW11 206 aa15.09■□□□□ 0.01
SRSF4-204ENST00000489898 FOXN1O15353 648 aa15.08■□□□□ 0
SRSF4-204ENST00000489898 NBPF7P0C2Y1 421 aaPredicted RBP15.08■□□□□ 0
SRSF4-204ENST00000489898 ATP2B4P23634 1241 aa15.08■□□□□ 0
SRSF4-204ENST00000489898 RABL6Q3YEC7 729 aaPredicted RBP15.08■□□□□ 0
SRSF4-204ENST00000489898 TBC1D10BQ4KMP7 808 aaPredicted RBP15.08■□□□□ 0
SRSF4-204ENST00000489898 RSBN1LQ6PCB5 846 aaPredicted RBP15.08■□□□□ 0
SRSF4-204ENST00000489898 SAPCD2Q86UD0 394 aa15.08■□□□□ 0
SRSF4-204ENST00000489898 ANKRD44Q8N8A2 993 aa15.08■□□□□ 0
SRSF4-204ENST00000489898 SUCLG2Q96I99 432 aa15.08■□□□□ 0
SRSF4-204ENST00000489898 TMX4Q9H1E5 349 aaPredicted RBP15.08■□□□□ 0
SRSF4-204ENST00000489898 ANKIB1Q9P2G1 1089 aa15.08■□□□□ 0
SRSF4-204ENST00000489898 CASP8AP2Q9UKL3 1982 aa15.07■□□□□ 0
SRSF4-204ENST00000489898 ADM5C9JUS6 153 aa15.07■□□□□ 0
SRSF4-204ENST00000489898 CHRNDQ07001 517 aa15.07■□□□□ 0
SRSF4-204ENST00000489898 CENPFP49454 3210 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms