RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 INTS5Q6P9B9 1019 aaKnown RBP10.35□□□□□ -0.75
VTI1A-207ENST00000489357 ERC1Q8IUD2 1116 aa10.35□□□□□ -0.75
VTI1A-207ENST00000489357 DNAJC10Q8IXB1 793 aa10.35□□□□□ -0.75
VTI1A-207ENST00000489357 CHMP5Q9NZZ3 219 aa10.35□□□□□ -0.75
VTI1A-207ENST00000489357 PI4KAP2A4QPH2 592 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 FAM205CA6NFA0 338 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 MAP3K7O43318 606 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 RPS6KA4O75676 772 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 ZBTB7AO95365 584 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 SDSP20132 328 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 MX1P20591 662 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 PTMSP20962 102 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 SLC4A3P48751 1232 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 COL23A1Q86Y22 540 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-207ENST00000489357 PI4KAP1Q8N8J0 262 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 SLC16A10Q8TF71 515 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 KIF1BPQ96EK5 621 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 IL17RAQ96F46 866 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 FMNL2Q96PY5 1086 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 TEX13AQ9BXU3 409 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-207ENST00000489357 PHAXQ9H814 394 aaKnown RBP10.34□□□□□ -0.75
VTI1A-207ENST00000489357 SPON1Q9HCB6 807 aa10.34□□□□□ -0.75
VTI1A-207ENST00000489357 LRRFIP2Q9Y608 721 aaKnown RBP10.34□□□□□ -0.75
VTI1A-207ENST00000489357 USP42Q9H9J4 1324 aaKnown RBP10.33□□□□□ -0.76
VTI1A-207ENST00000489357 ERC2O15083 957 aa10.33□□□□□ -0.76
VTI1A-207ENST00000489357 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
VTI1A-207ENST00000489357 EIF2S2P20042 333 aaKnown RBP10.33□□□□□ -0.76
VTI1A-207ENST00000489357 SSFA2P28290 1259 aa10.33□□□□□ -0.76
VTI1A-207ENST00000489357 CRKLP46109 303 aaKnown RBP10.33□□□□□ -0.76
VTI1A-207ENST00000489357 FLAD1Q8NFF5 587 aa10.33□□□□□ -0.76
VTI1A-207ENST00000489357 ADAM33Q9BZ11 813 aa10.33□□□□□ -0.76
VTI1A-207ENST00000489357 USP16Q9Y5T5 823 aa10.33□□□□□ -0.76
VTI1A-207ENST00000489357 TTC41PQ6P2S7 1318 aa10.33□□□□□ -0.76
VTI1A-207ENST00000489357 PNMA6EA0A0J9YXQ4 647 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 DEKP35659 375 aaKnown RBP10.32□□□□□ -0.76
VTI1A-207ENST00000489357 ANAPC15P60006 121 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 NEXNQ0ZGT2 675 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 GPIHBP1Q8IV16 184 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 TTC5Q8N0Z6 440 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 KIF2CQ99661 725 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 USP26Q9BXU7 913 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 TFCP2L1Q9NZI6 479 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 C4AP0C0L4 1744 aa10.32□□□□□ -0.76
VTI1A-207ENST00000489357 PRAMEF22A3QJZ6 481 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 K7ELQ4 463 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-207ENST00000489357 DDIT3P35638 169 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 MCM2P49736 904 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 EIF5P55010 431 aaKnown RBP10.31□□□□□ -0.76
VTI1A-207ENST00000489357 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 PPP1R42Q7Z4L9 355 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 CCDC87Q9NVE4 849 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 EXOC6BQ9Y2D4 811 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 MAP3K2Q9Y2U5 619 aa10.31□□□□□ -0.76
VTI1A-207ENST00000489357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
VTI1A-207ENST00000489357 GRM8O00222 908 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 STARD3NLO95772 234 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 MCCP23508 829 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
VTI1A-207ENST00000489357 SMIM5Q71RC9 77 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 TICAM2Q86XR7 235 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 C16orf71Q8IYS4 520 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-207ENST00000489357 RHPN1Q8TCX5 695 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 GPATCH3Q96I76 525 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 AK7Q96M32 723 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 HS3ST6Q96QI5 342 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 MTFR1LQ9H019 292 aa10.3□□□□□ -0.76
VTI1A-207ENST00000489357 C9orf78Q9NZ63 289 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-207ENST00000489357 PPP1R1BQ9UD71 204 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-207ENST00000489357 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
VTI1A-207ENST00000489357 NBPF26B4DH59 902 aa10.29□□□□□ -0.76
VTI1A-207ENST00000489357 GNPATO15228 680 aa10.29□□□□□ -0.76
VTI1A-207ENST00000489357 SMARCA5O60264 1052 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-207ENST00000489357 SURF6O75683 361 aaKnown RBP10.29□□□□□ -0.76
VTI1A-207ENST00000489357 NBPF7P0C2Y1 421 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-207ENST00000489357 TRAPPC3LQ5T215 181 aa10.29□□□□□ -0.76
VTI1A-207ENST00000489357 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
VTI1A-207ENST00000489357 LRP10Q7Z4F1 713 aa10.29□□□□□ -0.76
VTI1A-207ENST00000489357 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
VTI1A-207ENST00000489357 ZBTB1Q9Y2K1 713 aa10.29□□□□□ -0.76
VTI1A-207ENST00000489357 DDX11L8A8MPP1 907 aa10.28□□□□□ -0.76
VTI1A-207ENST00000489357 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
VTI1A-207ENST00000489357 A1BGP04217 495 aa10.28□□□□□ -0.76
VTI1A-207ENST00000489357 PTPREP23469 700 aa10.28□□□□□ -0.76
VTI1A-207ENST00000489357 IL6STP40189 918 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-207ENST00000489357 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
VTI1A-207ENST00000489357 CLEC17AQ6ZS10 378 aa10.28□□□□□ -0.76
VTI1A-207ENST00000489357 CLASRPQ8N2M8 674 aaKnown RBP10.28□□□□□ -0.76
VTI1A-207ENST00000489357 OTUD7AQ8TE49 926 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-207ENST00000489357 ZC3H15Q8WU90 426 aaKnown RBP10.28□□□□□ -0.76
VTI1A-207ENST00000489357 ESYT1Q9BSJ8 1104 aa10.28□□□□□ -0.76
VTI1A-207ENST00000489357 METTL22Q9BUU2 404 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-207ENST00000489357 SLKQ9H2G2 1235 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-207ENST00000489357 CWC22Q9HCG8 908 aaKnown RBP10.28□□□□□ -0.76
VTI1A-207ENST00000489357 AK9Q5TCS8 1911 aa10.28□□□□□ -0.76
VTI1A-207ENST00000489357 ARFGEF2Q9Y6D5 1785 aa10.27□□□□□ -0.77
VTI1A-207ENST00000489357 CHMLP26374 656 aa10.27□□□□□ -0.77
VTI1A-207ENST00000489357 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms