RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 ECE2O60344 883 aa16.72■□□□□ 0.27
ATPAF2-207ENST00000488753 VAMP4O75379 141 aa16.72■□□□□ 0.27
ATPAF2-207ENST00000488753 UFL1O94874 794 aa16.72■□□□□ 0.27
ATPAF2-207ENST00000488753 G2E3Q7L622 706 aa16.72■□□□□ 0.27
ATPAF2-207ENST00000488753 MICALL2Q8IY33 904 aa16.72■□□□□ 0.27
ATPAF2-207ENST00000488753 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
ATPAF2-207ENST00000488753 JARID2Q92833 1246 aaPredicted RBP16.72■□□□□ 0.27
ATPAF2-207ENST00000488753 ABT1Q9ULW3 272 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-207ENST00000488753 XDHP47989 1333 aa16.71■□□□□ 0.27
ATPAF2-207ENST00000488753 H7C1W4 665 aa16.71■□□□□ 0.27
ATPAF2-207ENST00000488753 FKBP5Q13451 457 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-207ENST00000488753 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.27
ATPAF2-207ENST00000488753 CST9Q5W186 159 aa16.71■□□□□ 0.27
ATPAF2-207ENST00000488753 MYH16Q9H6N6 1097 aa16.71■□□□□ 0.27
ATPAF2-207ENST00000488753 TRAF5O00463 557 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 ATP2B4P23634 1241 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 GCKRQ14397 625 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 DOK7Q18PE1 504 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 CDC37L1Q7L3B6 337 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 LINS1Q8NG48 757 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 TRPM4Q8TD43 1214 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 DNAAF4Q8WXU2 420 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 BSDC1Q9NW68 430 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-207ENST00000488753 G3V3G9 751 aa16.69■□□□□ 0.26
ATPAF2-207ENST00000488753 VIL1P09327 827 aaKnown RBP16.69■□□□□ 0.26
ATPAF2-207ENST00000488753 ECE1P42892 770 aa16.69■□□□□ 0.26
ATPAF2-207ENST00000488753 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
ATPAF2-207ENST00000488753 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-207ENST00000488753 ZNF609O15014 1411 aa16.69■□□□□ 0.26
ATPAF2-207ENST00000488753 WDR33Q9C0J8 1336 aaKnown RBP16.69■□□□□ 0.26
ATPAF2-207ENST00000488753 EXOSC9Q06265 439 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-207ENST00000488753 FMR1Q06787 632 aaKnown RBP eCLIP16.68■□□□□ 0.26
ATPAF2-207ENST00000488753 UBE3BQ7Z3V4 1068 aa16.68■□□□□ 0.26
ATPAF2-207ENST00000488753 AIDAQ96BJ3 306 aa16.68■□□□□ 0.26
ATPAF2-207ENST00000488753 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-207ENST00000488753 GREM2Q9H772 168 aa16.68■□□□□ 0.26
ATPAF2-207ENST00000488753 WBP1LQ9NX94 342 aa16.68■□□□□ 0.26
ATPAF2-207ENST00000488753 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
ATPAF2-207ENST00000488753 SHTN1A0MZ66 631 aa16.67■□□□□ 0.26
ATPAF2-207ENST00000488753 MAP2K1Q02750 393 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-207ENST00000488753 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
ATPAF2-207ENST00000488753 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
ATPAF2-207ENST00000488753 HHIPL1Q96JK4 782 aa16.67■□□□□ 0.26
ATPAF2-207ENST00000488753 GLIS2Q9BZE0 524 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-207ENST00000488753 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
ATPAF2-207ENST00000488753 FOXN1O15353 648 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 CELF2O95319 508 aaKnown RBP16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 CTCFP49711 727 aaPredicted RBP16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 CASP7P55210 303 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 SAMD7Q7Z3H4 446 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 PODNQ7Z5L7 613 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 SAPCD2Q86UD0 394 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 AGBL3Q8NEM8 1001 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 CAPNS2Q96L46 248 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 PRDM10Q9NQV6 1147 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 MINPP1Q9UNW1 487 aa16.66■□□□□ 0.26
ATPAF2-207ENST00000488753 MED23Q9ULK4 1368 aa16.65■□□□□ 0.26
ATPAF2-207ENST00000488753 CSF1RP07333 972 aa16.65■□□□□ 0.26
ATPAF2-207ENST00000488753 IGHMBP2P38935 993 aaKnown RBP16.65■□□□□ 0.26
ATPAF2-207ENST00000488753 TBC1D10BQ4KMP7 808 aaPredicted RBP16.65■□□□□ 0.26
ATPAF2-207ENST00000488753 ITGA6P23229 1130 aa16.64■□□□□ 0.25
ATPAF2-207ENST00000488753 ZNF280AP59817 542 aaPredicted RBP16.64■□□□□ 0.25
ATPAF2-207ENST00000488753 RSBN1LQ6PCB5 846 aaPredicted RBP16.64■□□□□ 0.25
ATPAF2-207ENST00000488753 LEMD3Q9Y2U8 911 aa16.64■□□□□ 0.25
ATPAF2-207ENST00000488753 EGFRP00533 1210 aa16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 MAP2K2P36507 400 aa16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 CCT4P50991 539 aaKnown RBP16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 KIF4BQ2VIQ3 1234 aa16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 PAXIP1Q6ZW49 1069 aaPredicted RBP16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 DCPSQ96C86 337 aaKnown RBP16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 MPHOSPH8Q99549 860 aa16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 ANKRD2Q9GZV1 360 aa16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 CACNA1FO60840 1977 aa16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 ZNF521Q96K83 1311 aa16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 TRPM7Q96QT4 1865 aa16.63■□□□□ 0.25
ATPAF2-207ENST00000488753 USP17L3A6NCW0 530 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 USP17L4A6NCW7 530 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 BEND3Q5T5X7 828 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 CYP4F22Q6NT55 531 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 USP17L1Q7RTZ2 530 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 KRT26Q7Z3Y9 468 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 USP48Q86UV5 1035 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 GMLQ99445 158 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 COA1Q9GZY4 146 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 THSD7BQ9C0I4 1608 aa16.62■□□□□ 0.25
ATPAF2-207ENST00000488753 ZNF408Q9H9D4 720 aa16.61■□□□□ 0.25
ATPAF2-207ENST00000488753 MYH3P11055 1940 aa16.6■□□□□ 0.25
ATPAF2-207ENST00000488753 SCN9AQ15858 1988 aa16.6■□□□□ 0.25
ATPAF2-207ENST00000488753 ANKRD18BA2A2Z9 1011 aa16.6■□□□□ 0.25
ATPAF2-207ENST00000488753 F6X3S4 739 aa16.6■□□□□ 0.25
ATPAF2-207ENST00000488753 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
ATPAF2-207ENST00000488753 MMP14P50281 582 aa16.6■□□□□ 0.25
ATPAF2-207ENST00000488753 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
ATPAF2-207ENST00000488753 BEGAINQ9BUH8 593 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms