RNA–Protein interactions for RNA: ENST00000488687.5

PSME4-209, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 3,073 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-209ENST00000488687 TRPC6Q9Y210 931 aa7.46□□□□□ -1.22
PSME4-209ENST00000488687 TNS1Q9HBL0 1735 aaKnown RBP7.45□□□□□ -1.22
PSME4-209ENST00000488687 IL6STP40189 918 aaPredicted RBP7.45□□□□□ -1.22
PSME4-209ENST00000488687 VPS72Q15906 364 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 TNNI3KQ59H18 835 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 NEUROD6Q96NK8 337 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 TLR7Q9NYK1 1049 aaKnown RBP7.45□□□□□ -1.22
PSME4-209ENST00000488687 TBC1D2BQ9UPU7 963 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 FPGT-TNNI3KV9GXZ4 949 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 HIP1O00291 1037 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 TRIM28Q13263 835 aaKnown RBP7.45□□□□□ -1.22
PSME4-209ENST00000488687 HLFQ16534 295 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 ZBTB38Q8NAP3 1195 aaPredicted RBP7.45□□□□□ -1.22
PSME4-209ENST00000488687 SMARCC1Q92922 1105 aaPredicted RBP7.45□□□□□ -1.22
PSME4-209ENST00000488687 FSD1Q9BTV5 496 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 ANTXR1Q9H6X2 564 aa7.45□□□□□ -1.22
PSME4-209ENST00000488687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.45□□□□□ -1.22
PSME4-209ENST00000488687 LOC102724428A0A0B4J2F2 783 aa7.44□□□□□ -1.22
PSME4-209ENST00000488687 FRAT2O75474 233 aaPredicted RBP7.44□□□□□ -1.22
PSME4-209ENST00000488687 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
PSME4-209ENST00000488687 PCCAP05165 728 aaPredicted RBP7.44□□□□□ -1.22
PSME4-209ENST00000488687 IL15P40933 162 aaPredicted RBP7.44□□□□□ -1.22
PSME4-209ENST00000488687 SIK1P57059 783 aa7.44□□□□□ -1.22
PSME4-209ENST00000488687 CCDC85AQ96PX6 553 aaPredicted RBP7.44□□□□□ -1.22
PSME4-209ENST00000488687 CCDC87Q9NVE4 849 aa7.44□□□□□ -1.22
PSME4-209ENST00000488687 TRMT112Q9UI30 125 aaKnown RBP7.44□□□□□ -1.22
PSME4-209ENST00000488687 SGSM2O43147 1006 aa7.44□□□□□ -1.22
PSME4-209ENST00000488687 NEK4P51957 841 aa7.44□□□□□ -1.22
PSME4-209ENST00000488687 ZNF594Q96JF6 807 aaPredicted RBP7.44□□□□□ -1.22
PSME4-209ENST00000488687 THSD7AQ9UPZ6 1657 aa7.44□□□□□ -1.22
PSME4-209ENST00000488687 EYA2O00167 538 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 EPB41L2O43491 1005 aaKnown RBP7.43□□□□□ -1.22
PSME4-209ENST00000488687 ANAPC15P60006 121 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 IFIT5Q13325 482 aaKnown RBP7.43□□□□□ -1.22
PSME4-209ENST00000488687 SF3B2Q13435 895 aaKnown RBP7.43□□□□□ -1.22
PSME4-209ENST00000488687 KRT27Q7Z3Y8 459 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 NLRP10Q86W26 655 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 PALLDQ8WX93 1383 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 TJP1Q07157 1748 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 ERVV-1B6SEH8 477 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 CRKLP46109 303 aaKnown RBP7.43□□□□□ -1.22
PSME4-209ENST00000488687 KCNJ4P48050 445 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 DNAJC2Q99543 621 aaKnown RBP7.43□□□□□ -1.22
PSME4-209ENST00000488687 CEP126Q9P2H0 1117 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 DBNLQ9UJU6 430 aaKnown RBP7.43□□□□□ -1.22
PSME4-209ENST00000488687 KCNQ2O43526 872 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 ATP5JP18859 108 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 LRRC24Q50LG9 513 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 GORABQ5T7V8 394 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 DBNDD2Q9BQY9 259 aa7.43□□□□□ -1.22
PSME4-209ENST00000488687 IRS4O14654 1257 aaPredicted RBP7.42□□□□□ -1.22
PSME4-209ENST00000488687 PSDA5PKW4 1024 aaPredicted RBP7.42□□□□□ -1.22
PSME4-209ENST00000488687 FAM177BA6PVY3 158 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 ONECUT3O60422 494 aaPredicted RBP7.42□□□□□ -1.22
PSME4-209ENST00000488687 CIAO1O76071 339 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 MCM2P49736 904 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 TIMM10P62072 90 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 INTS5Q6P9B9 1019 aaKnown RBP7.42□□□□□ -1.22
PSME4-209ENST00000488687 ATG9AQ7Z3C6 839 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 IL25Q9H293 177 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 PALD1Q9ULE6 856 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 AKAP2Q9Y2D5 859 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 RAD50Q92878 1312 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 CDHR2Q9BYE9 1310 aa7.42□□□□□ -1.22
PSME4-209ENST00000488687 ANKRD18BA2A2Z9 1011 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 HSPA4P34932 840 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 EIF5P55010 431 aaKnown RBP7.41□□□□□ -1.22
PSME4-209ENST00000488687 NMIQ13287 307 aaPredicted RBP7.41□□□□□ -1.22
PSME4-209ENST00000488687 SYNE4Q8N205 404 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 DDX27Q96GQ7 796 aaKnown RBP7.41□□□□□ -1.22
PSME4-209ENST00000488687 PLA2G12BQ9BX93 195 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 LSG1Q9H089 658 aaKnown RBP7.41□□□□□ -1.22
PSME4-209ENST00000488687 GPR108Q9NPR9 543 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 PDE8AO60658 829 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 ITPK1Q13572 414 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 NOL8Q76FK4 1167 aaKnown RBP7.41□□□□□ -1.22
PSME4-209ENST00000488687 PUS3Q9BZE2 481 aaKnown RBP7.41□□□□□ -1.22
PSME4-209ENST00000488687 ZMYND15Q9H091 742 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 CNNM1Q9NRU3 951 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 A0A1B0GUL7 405 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 CSF1RP07333 972 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 ITGA6P23229 1130 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 CTSWP56202 376 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 CCDC158Q5M9N0 1113 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 FAM182BQ5T319 152 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 LDHAL6AQ6ZMR3 332 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 FAM227BQ96M60 508 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 ZNF652Q9Y2D9 606 aa7.41□□□□□ -1.22
PSME4-209ENST00000488687 QSER1Q2KHR3 1735 aa7.4□□□□□ -1.22
PSME4-209ENST00000488687 ZKSCAN1P17029 563 aaPredicted RBP7.4□□□□□ -1.22
PSME4-209ENST00000488687 NUP98P52948 1817 aa7.4□□□□□ -1.22
PSME4-209ENST00000488687 METTL24Q5JXM2 366 aa7.4□□□□□ -1.22
PSME4-209ENST00000488687 TTC39AQ5SRH9 613 aa7.4□□□□□ -1.22
PSME4-209ENST00000488687 ZNF34Q8IZ26 560 aa7.4□□□□□ -1.22
PSME4-209ENST00000488687 EDC3Q96F86 508 aaKnown RBP7.4□□□□□ -1.22
PSME4-209ENST00000488687 HAUS7Q99871 368 aa7.4□□□□□ -1.22
PSME4-209ENST00000488687 UTP14AQ9BVJ6 771 aaKnown RBP7.4□□□□□ -1.22
PSME4-209ENST00000488687 UPF3BQ9BZI7 483 aaKnown RBP7.4□□□□□ -1.22
PSME4-209ENST00000488687 GREM2Q9H772 168 aa7.4□□□□□ -1.22
PSME4-209ENST00000488687 NDUFB9Q9Y6M9 179 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms