RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 HSPA6P17066 643 aa20.17■□□□□ 0.82
CTDSP1-209ENST00000488627 SUCLG2Q96I99 432 aa20.17■□□□□ 0.82
CTDSP1-209ENST00000488627 USP44Q9H0E7 712 aa20.17■□□□□ 0.82
CTDSP1-209ENST00000488627 GGA1Q9UJY5 639 aa20.17■□□□□ 0.82
CTDSP1-209ENST00000488627 GJA3Q9Y6H8 435 aa20.17■□□□□ 0.82
CTDSP1-209ENST00000488627 RIMBP2O15034 1052 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 UFL1O94874 794 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 IGHMBP2P38935 993 aaKnown RBP20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 SCNN1DP51172 638 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 SMC1BQ8NDV3 1235 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 EYA3Q99504 573 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 HACL1Q9UJ83 578 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 XDHP47989 1333 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
CTDSP1-209ENST00000488627 ANKRD18BA2A2Z9 1011 aa20.15■□□□□ 0.82
CTDSP1-209ENST00000488627 LTBP1Q14766 1721 aa20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 RAD17O75943 681 aa20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 EPHX2P34913 555 aa20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 IFIT5Q13325 482 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 CIAPIN1Q6FI81 312 aa20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 ZC3H12CQ9C0D7 883 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 DBNDD1Q9H9R9 158 aa20.14■□□□□ 0.81
CTDSP1-209ENST00000488627 BCAR3O75815 825 aa20.13■□□□□ 0.81
CTDSP1-209ENST00000488627 EPS15P42566 896 aa20.13■□□□□ 0.81
CTDSP1-209ENST00000488627 RABL6Q3YEC7 729 aaPredicted RBP20.13■□□□□ 0.81
CTDSP1-209ENST00000488627 ARHGAP45Q92619 1136 aa20.13■□□□□ 0.81
CTDSP1-209ENST00000488627 MPHOSPH8Q99549 860 aa20.13■□□□□ 0.81
CTDSP1-209ENST00000488627 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
CTDSP1-209ENST00000488627 KCNQ5Q9NR82 932 aa20.13■□□□□ 0.81
CTDSP1-209ENST00000488627 ECE2O60344 883 aa20.12■□□□□ 0.81
CTDSP1-209ENST00000488627 CCT4P50991 539 aaKnown RBP20.12■□□□□ 0.81
CTDSP1-209ENST00000488627 ANKRD44Q8N8A2 993 aa20.12■□□□□ 0.81
CTDSP1-209ENST00000488627 BICC1Q9H694 974 aaKnown RBP20.12■□□□□ 0.81
CTDSP1-209ENST00000488627 CHMP3Q9Y3E7 222 aa20.12■□□□□ 0.81
CTDSP1-209ENST00000488627 CHRNDQ07001 517 aa20.11■□□□□ 0.81
CTDSP1-209ENST00000488627 TNIP1Q15025 636 aa20.11■□□□□ 0.81
CTDSP1-209ENST00000488627 CCDC57Q2TAC2 916 aa20.11■□□□□ 0.81
CTDSP1-209ENST00000488627 ZNF594Q96JF6 807 aaPredicted RBP20.11■□□□□ 0.81
CTDSP1-209ENST00000488627 KIF16BQ96L93 1317 aa20.1■□□□□ 0.81
CTDSP1-209ENST00000488627 PSMD14O00487 310 aa20.1■□□□□ 0.81
CTDSP1-209ENST00000488627 GMPSP49915 693 aaPredicted RBP20.1■□□□□ 0.81
CTDSP1-209ENST00000488627 CHADLQ6NUI6 762 aa20.1■□□□□ 0.81
CTDSP1-209ENST00000488627 LDHDQ86WU2 507 aa20.1■□□□□ 0.81
CTDSP1-209ENST00000488627 ANKRD2Q9GZV1 360 aa20.1■□□□□ 0.81
CTDSP1-209ENST00000488627 GPRC5DQ9NZD1 345 aa20.1■□□□□ 0.81
CTDSP1-209ENST00000488627 LEMD3Q9Y2U8 911 aa20.1■□□□□ 0.81
CTDSP1-209ENST00000488627 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
CTDSP1-209ENST00000488627 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
CTDSP1-209ENST00000488627 LMOD1P29536 600 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-209ENST00000488627 APLP1P51693 650 aa20.08■□□□□ 0.81
CTDSP1-209ENST00000488627 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-209ENST00000488627 ZBTB12Q9Y330 459 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-209ENST00000488627 MED23Q9ULK4 1368 aa20.08■□□□□ 0.8
CTDSP1-209ENST00000488627 ZNF804BA4D1E1 1349 aa20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 SNAP23O00161 211 aa20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 VIL1P09327 827 aaKnown RBP20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 TRIM27P14373 513 aa20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 INTS3Q68E01 1043 aaKnown RBP20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 LDHAL6AQ6ZMR3 332 aa20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 HELBQ8NG08 1087 aaPredicted RBP20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 MYH3P11055 1940 aa20.07■□□□□ 0.8
CTDSP1-209ENST00000488627 IRS2Q9Y4H2 1338 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 CEP350Q5VT06 3117 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 SHTN1A0MZ66 631 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 IPO8O15397 1037 aaKnown RBP20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 TAF5LO75529 589 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 ITGBL1O95965 494 aaPredicted RBP20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 KLRK1P26718 216 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 ATF7IPQ6VMQ6 1270 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 PODNQ7Z5L7 613 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 DPF2Q92785 391 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 PUS3Q9BZE2 481 aaKnown RBP20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 SCN4AP35499 1836 aa20.06■□□□□ 0.8
CTDSP1-209ENST00000488627 USP50Q70EL3 339 aaPredicted RBP20.05■□□□□ 0.8
CTDSP1-209ENST00000488627 ADARB2Q9NS39 739 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-209ENST00000488627 CNOT7Q9UIV1 285 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-209ENST00000488627 RIPOR2Q9Y4F9 1068 aa20.05■□□□□ 0.8
CTDSP1-209ENST00000488627 G3V3G9 751 aa20.04■□□□□ 0.8
CTDSP1-209ENST00000488627 HIRAP54198 1017 aaPredicted RBP20.04■□□□□ 0.8
CTDSP1-209ENST00000488627 HTRA3P83110 453 aa20.04■□□□□ 0.8
CTDSP1-209ENST00000488627 TAF7LQ5H9L4 462 aa20.04■□□□□ 0.8
CTDSP1-209ENST00000488627 DCAF8Q5TAQ9 597 aa20.04■□□□□ 0.8
CTDSP1-209ENST00000488627 C15orf52Q6ZUT6 534 aaKnown RBP20.04■□□□□ 0.8
CTDSP1-209ENST00000488627 DNAJC5GQ8N7S2 189 aa20.04■□□□□ 0.8
CTDSP1-209ENST00000488627 FRAT1Q92837 279 aaPredicted RBP20.04■□□□□ 0.8
CTDSP1-209ENST00000488627 UBTFL1P0CB47 393 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-209ENST00000488627 RPS12P25398 132 aaKnown RBP20.03■□□□□ 0.8
CTDSP1-209ENST00000488627 RFX5P48382 616 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-209ENST00000488627 MEIS3Q99687 375 aa20.03■□□□□ 0.8
CTDSP1-209ENST00000488627 COA1Q9GZY4 146 aa20.03■□□□□ 0.8
CTDSP1-209ENST00000488627 CNNM1Q9NRU3 951 aa20.03■□□□□ 0.8
CTDSP1-209ENST00000488627 CLEC11AQ9Y240 323 aa20.03■□□□□ 0.8
CTDSP1-209ENST00000488627 PASKQ96RG2 1323 aa20.02■□□□□ 0.8
CTDSP1-209ENST00000488627 MAP1SQ66K74 1059 aaPredicted RBP20.02■□□□□ 0.8
CTDSP1-209ENST00000488627 MICALL2Q8IY33 904 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms