RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 HOXB7P09629 217 aa17.23■□□□□ 0.35
UBAP2-211ENST00000488443 KRT26Q7Z3Y9 468 aa17.23■□□□□ 0.35
UBAP2-211ENST00000488443 EYA3Q99504 573 aa17.23■□□□□ 0.35
UBAP2-211ENST00000488443 ANKIB1Q9P2G1 1089 aa17.23■□□□□ 0.35
UBAP2-211ENST00000488443 SPEF2Q9C093 1822 aa17.23■□□□□ 0.35
UBAP2-211ENST00000488443 SCN9AQ15858 1988 aa17.22■□□□□ 0.35
UBAP2-211ENST00000488443 APAF1O14727 1248 aa17.22■□□□□ 0.35
UBAP2-211ENST00000488443 MAP2K2P36507 400 aa17.22■□□□□ 0.35
UBAP2-211ENST00000488443 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
UBAP2-211ENST00000488443 TBC1D16Q8TBP0 767 aa17.22■□□□□ 0.35
UBAP2-211ENST00000488443 ZC3H15Q8WU90 426 aaKnown RBP17.22■□□□□ 0.35
UBAP2-211ENST00000488443 PGAP2Q9UHJ9 254 aa17.22■□□□□ 0.35
UBAP2-211ENST00000488443 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
UBAP2-211ENST00000488443 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.35
UBAP2-211ENST00000488443 DCPSQ96C86 337 aaKnown RBP17.21■□□□□ 0.35
UBAP2-211ENST00000488443 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
UBAP2-211ENST00000488443 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
UBAP2-211ENST00000488443 ZBTB38Q8NAP3 1195 aaPredicted RBP17.19■□□□□ 0.34
UBAP2-211ENST00000488443 DPF2Q92785 391 aa17.19■□□□□ 0.34
UBAP2-211ENST00000488443 GBA2Q9HCG7 927 aaPredicted RBP17.19■□□□□ 0.34
UBAP2-211ENST00000488443 GGA3Q9NZ52 723 aa17.19■□□□□ 0.34
UBAP2-211ENST00000488443 GGA1Q9UJY5 639 aa17.19■□□□□ 0.34
UBAP2-211ENST00000488443 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
UBAP2-211ENST00000488443 CCDC152Q4G0S7 254 aa17.18■□□□□ 0.34
UBAP2-211ENST00000488443 C8orf58Q8NAV2 365 aa17.18■□□□□ 0.34
UBAP2-211ENST00000488443 FBXW7Q969H0 707 aa17.18■□□□□ 0.34
UBAP2-211ENST00000488443 MCOLN1Q9GZU1 580 aa17.18■□□□□ 0.34
UBAP2-211ENST00000488443 SCAF8Q9UPN6 1271 aaKnown RBP17.18■□□□□ 0.34
UBAP2-211ENST00000488443 RPS12P25398 132 aaKnown RBP17.17■□□□□ 0.34
UBAP2-211ENST00000488443 GNAI1P63096 354 aa17.17■□□□□ 0.34
UBAP2-211ENST00000488443 DGKZQ13574 1117 aa17.17■□□□□ 0.34
UBAP2-211ENST00000488443 C2orf69Q8N8R5 385 aa17.17■□□□□ 0.34
UBAP2-211ENST00000488443 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
UBAP2-211ENST00000488443 CWC25Q9NXE8 425 aaPredicted RBP17.17■□□□□ 0.34
UBAP2-211ENST00000488443 PDE8AO60658 829 aa17.16■□□□□ 0.34
UBAP2-211ENST00000488443 ZNF853P0CG23 659 aa17.16■□□□□ 0.34
UBAP2-211ENST00000488443 ZNF157P51786 506 aaPredicted RBP17.16■□□□□ 0.34
UBAP2-211ENST00000488443 NOGQ13253 232 aa17.16■□□□□ 0.34
UBAP2-211ENST00000488443 TRIM28Q13263 835 aaKnown RBP17.16■□□□□ 0.34
UBAP2-211ENST00000488443 RGMBQ6NW40 437 aa17.16■□□□□ 0.34
UBAP2-211ENST00000488443 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
UBAP2-211ENST00000488443 HHIPL1Q96JK4 782 aa17.16■□□□□ 0.34
UBAP2-211ENST00000488443 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
UBAP2-211ENST00000488443 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
UBAP2-211ENST00000488443 CA12O43570 354 aa17.15■□□□□ 0.34
UBAP2-211ENST00000488443 PCCAP05165 728 aaPredicted RBP17.15■□□□□ 0.34
UBAP2-211ENST00000488443 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
UBAP2-211ENST00000488443 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
UBAP2-211ENST00000488443 DDX58O95786 925 aaKnown RBP17.14■□□□□ 0.33
UBAP2-211ENST00000488443 VIL1P09327 827 aaKnown RBP17.14■□□□□ 0.33
UBAP2-211ENST00000488443 KIF23Q02241 960 aaPredicted RBP17.14■□□□□ 0.33
UBAP2-211ENST00000488443 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
UBAP2-211ENST00000488443 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.33
UBAP2-211ENST00000488443 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
UBAP2-211ENST00000488443 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
UBAP2-211ENST00000488443 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
UBAP2-211ENST00000488443 CDCA5Q96FF9 252 aa17.14■□□□□ 0.33
UBAP2-211ENST00000488443 METTL22Q9BUU2 404 aaPredicted RBP17.14■□□□□ 0.33
UBAP2-211ENST00000488443 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
UBAP2-211ENST00000488443 SCARF1Q14162 830 aa17.13■□□□□ 0.33
UBAP2-211ENST00000488443 CCDC30Q5VVM6 783 aa17.13■□□□□ 0.33
UBAP2-211ENST00000488443 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
UBAP2-211ENST00000488443 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
UBAP2-211ENST00000488443 PSME4Q14997 1843 aa17.12■□□□□ 0.33
UBAP2-211ENST00000488443 MYH3P11055 1940 aa17.12■□□□□ 0.33
UBAP2-211ENST00000488443 AKAP11Q9UKA4 1901 aa17.12■□□□□ 0.33
UBAP2-211ENST00000488443 FAM155AB1AL88 458 aaPredicted RBP17.12■□□□□ 0.33
UBAP2-211ENST00000488443 TRPA1O75762 1119 aa17.12■□□□□ 0.33
UBAP2-211ENST00000488443 MLLT1Q03111 559 aaPredicted RBP17.12■□□□□ 0.33
UBAP2-211ENST00000488443 MXD3Q9BW11 206 aa17.12■□□□□ 0.33
UBAP2-211ENST00000488443 XDHP47989 1333 aa17.12■□□□□ 0.33
UBAP2-211ENST00000488443 CTSWP56202 376 aa17.11■□□□□ 0.33
UBAP2-211ENST00000488443 CWF19L2Q2TBE0 894 aaKnown RBP17.11■□□□□ 0.33
UBAP2-211ENST00000488443 PRAMEF18Q5VWM3 479 aa17.11■□□□□ 0.33
UBAP2-211ENST00000488443 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.11■□□□□ 0.33
UBAP2-211ENST00000488443 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
UBAP2-211ENST00000488443 ATP2B4P23634 1241 aa17.1■□□□□ 0.33
UBAP2-211ENST00000488443 MOB2Q70IA6 237 aa17.1■□□□□ 0.33
UBAP2-211ENST00000488443 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
UBAP2-211ENST00000488443 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
UBAP2-211ENST00000488443 GREM2Q9H772 168 aa17.1■□□□□ 0.33
UBAP2-211ENST00000488443 USP17L3A6NCW0 530 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 USP17L4A6NCW7 530 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 TTLL12Q14166 644 aaPredicted RBP17.09■□□□□ 0.33
UBAP2-211ENST00000488443 USP17L1Q7RTZ2 530 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 AGBL3Q8NEM8 1001 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 CCDC102AQ96A19 550 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 MYOZ2Q9NPC6 264 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 RNF186Q9NXI6 227 aa17.09■□□□□ 0.33
UBAP2-211ENST00000488443 SLC10A3P09131 477 aa17.08■□□□□ 0.32
UBAP2-211ENST00000488443 NEXNQ0ZGT2 675 aa17.08■□□□□ 0.32
UBAP2-211ENST00000488443 CCDC184Q52MB2 194 aa17.08■□□□□ 0.32
UBAP2-211ENST00000488443 KSR2Q6VAB6 950 aa17.08■□□□□ 0.32
UBAP2-211ENST00000488443 G2E3Q7L622 706 aa17.08■□□□□ 0.32
UBAP2-211ENST00000488443 UBE3BQ7Z3V4 1068 aa17.08■□□□□ 0.32
UBAP2-211ENST00000488443 ZNF280AP59817 542 aaPredicted RBP17.07■□□□□ 0.32
UBAP2-211ENST00000488443 MKRN3Q13064 507 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms