RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 RFC5P40937 340 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 ABL2P42684 1182 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 CLK2P49760 499 aaKnown RBP3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 RETREG2Q8NC44 543 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 PXYLP1Q8TE99 480 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 GOPCQ9HD26 462 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 ADGRG1Q9Y653 693 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 TLL2Q9Y6L7 1015 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 ECM29Q5VYK3 1845 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 ST20-MTHFSA0A0A6YYL1 179 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 A6NJR5 290 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 PHF14O94880 888 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 HSPA8P11142 646 aaKnown RBP3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 RFX1P22670 979 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 PARP10Q53GL7 1025 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 C6orf132Q5T0Z8 1188 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 POTEEQ6S8J3 1075 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 ZNF428Q96B54 188 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 CARD14Q9BXL6 1004 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 TAOK3Q9H2K8 898 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 WWC3Q9ULE0 1092 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 PCDHB15Q9Y5E8 787 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 RTL9Q8NET4 1388 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 HSP90AB2PQ58FF8 381 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 ZNF530Q6P9A1 599 aaPredicted RBP3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 MTMR14Q8NCE2 650 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 TMC1Q8TDI8 760 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 SLC4A9Q96Q91 983 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 RNF181Q9P0P0 153 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 HACL1Q9UJ83 578 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 TBC1D2BQ9UPU7 963 aa3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 ZNF330Q9Y3S2 320 aaPredicted RBP3.67□□□□□ -1.82
DEPDC1-203ENST00000488146 DDX11L8A8MPP1 907 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 NFKBIEO00221 500 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 ARHGAP33O14559 1287 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 RAD21O60216 631 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 IGSF3O75054 1194 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 SERPINB2P05120 415 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 COL9A1P20849 921 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 GUCA2AQ02747 115 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 HSP90AB3PQ58FF7 597 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 ARHGAP27Q6ZUM4 889 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 ZNF496Q96IT1 587 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 FMNL2Q96PY5 1086 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 TAF1DQ9H5J8 278 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 ZCCHC17Q9NP64 241 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 NUP98P52948 1817 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 COL4A1P02462 1669 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 SLX4Q8IY92 1834 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 MOXD2PA6NHM9 499 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 POTECB2RU33 542 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 CAMTA2O94983 1202 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 SRGNP10124 158 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 MTHFSP49914 203 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 NFIXQ14938 502 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 C2CD5Q86YS7 1000 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 DPF2Q92785 391 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 CCDC97Q96F63 343 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 BCL2L12Q9HB09 334 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 ASAP1Q9ULH1 1129 aa3.66□□□□□ -1.82
DEPDC1-203ENST00000488146 ITGBL1O95965 494 aaPredicted RBP3.65□□□□□ -1.82
DEPDC1-203ENST00000488146 FKBP1AP62942 108 aaKnown RBP3.65□□□□□ -1.82
DEPDC1-203ENST00000488146 IRF5Q13568 498 aa3.65□□□□□ -1.82
DEPDC1-203ENST00000488146 TYW1BQ6NUM6 668 aa3.65□□□□□ -1.82
DEPDC1-203ENST00000488146 ADGRD1Q6QNK2 874 aa3.65□□□□□ -1.82
DEPDC1-203ENST00000488146 KCTD17Q8N5Z5 321 aa3.65□□□□□ -1.82
DEPDC1-203ENST00000488146 TSC1Q92574 1164 aa3.65□□□□□ -1.82
DEPDC1-203ENST00000488146 CDCA7LQ96GN5 454 aa3.65□□□□□ -1.82
DEPDC1-203ENST00000488146 ZBTB7CA1YPR0 619 aa3.65□□□□□ -1.83
DEPDC1-203ENST00000488146 AP1G2O75843 785 aa3.65□□□□□ -1.83
DEPDC1-203ENST00000488146 MPRIPQ6WCQ1 1025 aa3.65□□□□□ -1.83
DEPDC1-203ENST00000488146 SPIRE2Q8WWL2 714 aa3.65□□□□□ -1.83
DEPDC1-203ENST00000488146 BCS1LQ9Y276 419 aa3.65□□□□□ -1.83
DEPDC1-203ENST00000488146 PPP2R3BQ9Y5P8 575 aa3.65□□□□□ -1.83
DEPDC1-203ENST00000488146 A0A1W2PPC1 479 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 RCCD1A6NED2 376 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 IARSP41252 1262 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 FOSBP53539 338 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 EIF4G2P78344 907 aaKnown RBP eCLIP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 TNIP1Q15025 636 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 RTL5Q5HYW3 569 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 PPP4R3BQ5MIZ7 849 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 PRPF38BQ5VTL8 546 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 PRR5LQ6MZQ0 368 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 HMX1Q9NP08 348 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 NMRK2Q9NPI5 230 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 ADARB2Q9NS39 739 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 TSKSQ9UJT2 592 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 CACNA1FO60840 1977 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 WDR33Q9C0J8 1336 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 GNAT3A8MTJ3 354 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 BBOX1O75936 387 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 SNRPA1P09661 255 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 PRMT2P55345 433 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 LMOD3Q0VAK6 560 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 NOGQ13253 232 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 TRIM28Q13263 835 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 PROX2Q3B8N5 592 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 INTS3Q68E01 1043 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms