RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 GRAPQ13588 217 aa16.6■□□□□ 0.25
NR1H3-223ENST00000486991 CIAPIN1Q6FI81 312 aa16.6■□□□□ 0.25
NR1H3-223ENST00000486991 SUPT20HQ8NEM7 779 aa16.6■□□□□ 0.25
NR1H3-223ENST00000486991 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
NR1H3-223ENST00000486991 TRPM4Q8TD43 1214 aa16.6■□□□□ 0.25
NR1H3-223ENST00000486991 MYD88Q99836 296 aa16.6■□□□□ 0.25
NR1H3-223ENST00000486991 MAP3K2Q9Y2U5 619 aa16.6■□□□□ 0.25
NR1H3-223ENST00000486991 SPEF2Q9C093 1822 aa16.6■□□□□ 0.25
NR1H3-223ENST00000486991 PI4KAP2A4QPH2 592 aa16.59■□□□□ 0.25
NR1H3-223ENST00000486991 MAP2K1Q02750 393 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-223ENST00000486991 KIAA2012Q0VF49 1180 aa16.59■□□□□ 0.25
NR1H3-223ENST00000486991 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
NR1H3-223ENST00000486991 KSR2Q6VAB6 950 aa16.59■□□□□ 0.25
NR1H3-223ENST00000486991 PI4KAP1Q8N8J0 262 aa16.59■□□□□ 0.25
NR1H3-223ENST00000486991 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
NR1H3-223ENST00000486991 GPR101Q96P66 508 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-223ENST00000486991 TLL2Q9Y6L7 1015 aa16.59■□□□□ 0.25
NR1H3-223ENST00000486991 CELF2O95319 508 aaKnown RBP16.58■□□□□ 0.24
NR1H3-223ENST00000486991 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
NR1H3-223ENST00000486991 CELF1Q92879 486 aaKnown RBP16.58■□□□□ 0.24
NR1H3-223ENST00000486991 VPS33BQ9H267 617 aa16.58■□□□□ 0.24
NR1H3-223ENST00000486991 ZNF408Q9H9D4 720 aa16.58■□□□□ 0.24
NR1H3-223ENST00000486991 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
NR1H3-223ENST00000486991 IRS4O14654 1257 aaPredicted RBP16.57■□□□□ 0.24
NR1H3-223ENST00000486991 RIMBP2O15034 1052 aa16.57■□□□□ 0.24
NR1H3-223ENST00000486991 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
NR1H3-223ENST00000486991 HSP90B1P14625 803 aaKnown RBP16.57■□□□□ 0.24
NR1H3-223ENST00000486991 FLIIQ13045 1269 aa16.57■□□□□ 0.24
NR1H3-223ENST00000486991 FRAT1Q92837 279 aaPredicted RBP16.57■□□□□ 0.24
NR1H3-223ENST00000486991 KCNQ5Q9NR82 932 aa16.57■□□□□ 0.24
NR1H3-223ENST00000486991 CNOT7Q9UIV1 285 aaKnown RBP16.57■□□□□ 0.24
NR1H3-223ENST00000486991 THSD7BQ9C0I4 1608 aa16.56■□□□□ 0.24
NR1H3-223ENST00000486991 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
NR1H3-223ENST00000486991 PCCAP05165 728 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-223ENST00000486991 ABHD8Q96I13 439 aa16.56■□□□□ 0.24
NR1H3-223ENST00000486991 DBNDD1Q9H9R9 158 aa16.56■□□□□ 0.24
NR1H3-223ENST00000486991 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-223ENST00000486991 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
NR1H3-223ENST00000486991 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
NR1H3-223ENST00000486991 CDHR2Q9BYE9 1310 aa16.55■□□□□ 0.24
NR1H3-223ENST00000486991 ECE1P42892 770 aa16.55■□□□□ 0.24
NR1H3-223ENST00000486991 GPSM2P81274 684 aa16.55■□□□□ 0.24
NR1H3-223ENST00000486991 TNIP1Q15025 636 aa16.55■□□□□ 0.24
NR1H3-223ENST00000486991 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
NR1H3-223ENST00000486991 SAPCD2Q86UD0 394 aa16.55■□□□□ 0.24
NR1H3-223ENST00000486991 JARID2Q92833 1246 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-223ENST00000486991 POLLQ9UGP5 575 aa16.55■□□□□ 0.24
NR1H3-223ENST00000486991 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
NR1H3-223ENST00000486991 SUPT16HQ9Y5B9 1047 aaKnown RBP16.55■□□□□ 0.24
NR1H3-223ENST00000486991 NEURL1BA8MQ27 555 aa16.54■□□□□ 0.24
NR1H3-223ENST00000486991 PSMD14O00487 310 aa16.54■□□□□ 0.24
NR1H3-223ENST00000486991 EGFRP00533 1210 aa16.54■□□□□ 0.24
NR1H3-223ENST00000486991 BRPF1P55201 1214 aaPredicted RBP16.54■□□□□ 0.24
NR1H3-223ENST00000486991 DOK7Q18PE1 504 aa16.54■□□□□ 0.24
NR1H3-223ENST00000486991 CWF19L2Q2TBE0 894 aaKnown RBP16.54■□□□□ 0.24
NR1H3-223ENST00000486991 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
NR1H3-223ENST00000486991 MICALL2Q8IY33 904 aa16.54■□□□□ 0.24
NR1H3-223ENST00000486991 ZIC5Q96T25 663 aa16.54■□□□□ 0.24
NR1H3-223ENST00000486991 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
NR1H3-223ENST00000486991 SCN9AQ15858 1988 aa16.53■□□□□ 0.24
NR1H3-223ENST00000486991 C6orf229H3BNL8 230 aa16.53■□□□□ 0.24
NR1H3-223ENST00000486991 IPO8O15397 1037 aaKnown RBP16.53■□□□□ 0.24
NR1H3-223ENST00000486991 PLIN1O60240 522 aa16.53■□□□□ 0.24
NR1H3-223ENST00000486991 FKBP5Q13451 457 aaPredicted RBP16.53■□□□□ 0.24
NR1H3-223ENST00000486991 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
NR1H3-223ENST00000486991 TBC1D10BQ4KMP7 808 aaPredicted RBP16.53■□□□□ 0.24
NR1H3-223ENST00000486991 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
NR1H3-223ENST00000486991 CASP7P55210 303 aa16.52■□□□□ 0.24
NR1H3-223ENST00000486991 RRP1P56182 461 aaKnown RBP16.52■□□□□ 0.24
NR1H3-223ENST00000486991 RBM26Q5T8P6 1007 aaKnown RBP16.52■□□□□ 0.24
NR1H3-223ENST00000486991 ZKSCAN2Q63HK3 967 aa16.52■□□□□ 0.24
NR1H3-223ENST00000486991 TMC4Q7Z404 712 aa16.52■□□□□ 0.24
NR1H3-223ENST00000486991 BEGAINQ9BUH8 593 aa16.52■□□□□ 0.24
NR1H3-223ENST00000486991 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
NR1H3-223ENST00000486991 PSME4Q14997 1843 aa16.52■□□□□ 0.23
NR1H3-223ENST00000486991 PTPRCP08575 1304 aa16.51■□□□□ 0.23
NR1H3-223ENST00000486991 H7C1D1 291 aa16.51■□□□□ 0.23
NR1H3-223ENST00000486991 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
NR1H3-223ENST00000486991 DNAAF4Q8WXU2 420 aa16.51■□□□□ 0.23
NR1H3-223ENST00000486991 ZNF646O15015 1829 aaPredicted RBP16.51■□□□□ 0.23
NR1H3-223ENST00000486991 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
NR1H3-223ENST00000486991 F6X3S4 739 aa16.5■□□□□ 0.23
NR1H3-223ENST00000486991 H7C1W4 665 aa16.5■□□□□ 0.23
NR1H3-223ENST00000486991 ECE2O60344 883 aa16.5■□□□□ 0.23
NR1H3-223ENST00000486991 PDE8AO60658 829 aa16.5■□□□□ 0.23
NR1H3-223ENST00000486991 MAP2K2P36507 400 aa16.5■□□□□ 0.23
NR1H3-223ENST00000486991 GCKRQ14397 625 aa16.5■□□□□ 0.23
NR1H3-223ENST00000486991 ZC3H15Q8WU90 426 aaKnown RBP16.5■□□□□ 0.23
NR1H3-223ENST00000486991 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-223ENST00000486991 API5Q9BZZ5 524 aaKnown RBP16.5■□□□□ 0.23
NR1H3-223ENST00000486991 CCDC85CA6NKD9 419 aa16.49■□□□□ 0.23
NR1H3-223ENST00000486991 ADM5C9JUS6 153 aa16.49■□□□□ 0.23
NR1H3-223ENST00000486991 CTSWP56202 376 aa16.49■□□□□ 0.23
NR1H3-223ENST00000486991 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
NR1H3-223ENST00000486991 NEXNQ0ZGT2 675 aa16.49■□□□□ 0.23
NR1H3-223ENST00000486991 ATF7IPQ6VMQ6 1270 aa16.49■□□□□ 0.23
NR1H3-223ENST00000486991 TBC1D16Q8TBP0 767 aa16.49■□□□□ 0.23
NR1H3-223ENST00000486991 ARHGAP45Q92619 1136 aa16.49■□□□□ 0.23
NR1H3-223ENST00000486991 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
NR1H3-223ENST00000486991 TNNQ9UQP3 1299 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms