RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PSME1Q06323 249 aa14.5□□□□□ -0.09
HSPG2-211ENST00000486901 COPS6Q7L5N1 327 aa14.5□□□□□ -0.09
HSPG2-211ENST00000486901 DDX41Q9UJV9 622 aaKnown RBP14.5□□□□□ -0.09
HSPG2-211ENST00000486901 CCAR2Q8N163 923 aaKnown RBP14.5□□□□□ -0.09
HSPG2-211ENST00000486901 XAGE3Q8WTP9 111 aa14.5□□□□□ -0.09
HSPG2-211ENST00000486901 ZSWIM4Q9H7M6 989 aa14.5□□□□□ -0.09
HSPG2-211ENST00000486901 KCNA6P17658 529 aa14.49□□□□□ -0.09
HSPG2-211ENST00000486901 IGKV5-2P06315 115 aa14.49□□□□□ -0.09
HSPG2-211ENST00000486901 XPO4Q9C0E2 1151 aaKnown RBP14.49□□□□□ -0.09
HSPG2-211ENST00000486901 SLFN14P0C7P3 912 aa14.49□□□□□ -0.09
HSPG2-211ENST00000486901 ATP1A3P13637 1013 aa14.49□□□□□ -0.09
HSPG2-211ENST00000486901 KDRP35968 1356 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 GIGYF1O75420 1035 aaPredicted RBP14.48□□□□□ -0.09
HSPG2-211ENST00000486901 SEC31AO94979 1220 aaKnown RBP14.48□□□□□ -0.09
HSPG2-211ENST00000486901 ZC3H6P61129 1189 aaKnown RBP14.48□□□□□ -0.09
HSPG2-211ENST00000486901 RBM6P78332 1123 aaKnown RBP14.48□□□□□ -0.09
HSPG2-211ENST00000486901 ANKRD1Q15327 319 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 DHX40Q8IX18 779 aaKnown RBP14.48□□□□□ -0.09
HSPG2-211ENST00000486901 KIF20AO95235 890 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 NDUFA8P51970 172 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 CCZ1BP86790 482 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 CCZ1P86791 482 aaPredicted RBP14.48□□□□□ -0.09
HSPG2-211ENST00000486901 STX1AQ16623 288 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 DNAI1Q9UI46 699 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 PAXBP1Q9Y5B6 917 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 CTDNEP1O95476 244 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 SNW1Q13573 536 aaKnown RBP14.48□□□□□ -0.09
HSPG2-211ENST00000486901 ZCCHC17Q9NP64 241 aaKnown RBP14.48□□□□□ -0.09
HSPG2-211ENST00000486901 CLIC4Q9Y696 253 aa14.48□□□□□ -0.09
HSPG2-211ENST00000486901 GYS2P54840 703 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 ERC1Q8IUD2 1116 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 IL17RAQ96F46 866 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 ZNF594Q96JF6 807 aaPredicted RBP14.47□□□□□ -0.09
HSPG2-211ENST00000486901 CFAP45Q9UL16 551 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 GNL2Q13823 731 aaKnown RBP14.47□□□□□ -0.09
HSPG2-211ENST00000486901 KRT222Q8N1A0 295 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 FEZ1Q99689 392 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 ELP1O95163 1332 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 TSPOAP1O95153 1857 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 FKBP4Q02790 459 aaKnown RBP eCLIP14.47□□□□□ -0.09
HSPG2-211ENST00000486901 SPECC1Q5M775 1068 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 AIFM3Q96NN9 605 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 ZNF446Q9NWS9 450 aa14.47□□□□□ -0.09
HSPG2-211ENST00000486901 HTATSF1O43719 755 aaKnown RBP14.46□□□□□ -0.09
HSPG2-211ENST00000486901 STK38Q15208 465 aa14.46□□□□□ -0.09
HSPG2-211ENST00000486901 ARHGAP29Q52LW3 1261 aa14.46□□□□□ -0.09
HSPG2-211ENST00000486901 NSUN7Q8NE18 718 aaKnown RBP14.46□□□□□ -0.09
HSPG2-211ENST00000486901 PCDHA7Q9UN72 937 aa14.46□□□□□ -0.09
HSPG2-211ENST00000486901 USP31Q70CQ4 1352 aa14.46□□□□□ -0.09
HSPG2-211ENST00000486901 RICTORQ6R327 1708 aa14.46□□□□□ -0.09
HSPG2-211ENST00000486901 NPHP4O75161 1426 aaPredicted RBP14.46□□□□□ -0.09
HSPG2-211ENST00000486901 URI1O94763 535 aaPredicted RBP14.46□□□□□ -0.09
HSPG2-211ENST00000486901 CEP57L1Q8IYX8 460 aa14.46□□□□□ -0.09
HSPG2-211ENST00000486901 PLCD3Q8N3E9 789 aa14.46□□□□□ -0.09
HSPG2-211ENST00000486901 CCDC34Q96HJ3 373 aa14.45□□□□□ -0.1
HSPG2-211ENST00000486901 ADD1P35611 737 aaKnown RBP14.45□□□□□ -0.1
HSPG2-211ENST00000486901 TERF2Q15554 542 aa14.45□□□□□ -0.1
HSPG2-211ENST00000486901 NFATC2IPQ8NCF5 419 aa14.45□□□□□ -0.1
HSPG2-211ENST00000486901 ZNF397Q8NF99 534 aaPredicted RBP14.45□□□□□ -0.1
HSPG2-211ENST00000486901 RNMTO43148 476 aaKnown RBP14.45□□□□□ -0.1
HSPG2-211ENST00000486901 ATP2B1P20020 1258 aa14.45□□□□□ -0.1
HSPG2-211ENST00000486901 E4F1Q66K89 784 aaPredicted RBP14.45□□□□□ -0.1
HSPG2-211ENST00000486901 PDILTQ8N807 584 aa14.45□□□□□ -0.1
HSPG2-211ENST00000486901 LINS1Q8NG48 757 aa14.45□□□□□ -0.1
HSPG2-211ENST00000486901 DENND2AQ9ULE3 1009 aa14.45□□□□□ -0.1
HSPG2-211ENST00000486901 RIMBP3CA6NJZ7 1639 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 RIMBP3BA6NNM3 1639 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 RIMBP3Q9UFD9 1639 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 SLU7O95391 586 aaKnown RBP14.44□□□□□ -0.1
HSPG2-211ENST00000486901 NEXNQ0ZGT2 675 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 ARMCX5Q6P1M9 558 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 NRKQ7Z2Y5 1582 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 WASHC4Q2M389 1173 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 NBPF11Q86T75 865 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 NEK11Q8NG66 645 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 A0A087WZG4 1122 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 TNNI3KQ59H18 835 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 ANO10Q9NW15 660 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 FPGT-TNNI3KV9GXZ4 949 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 PTPRUQ92729 1446 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 TMEM2Q9UHN6 1383 aa14.44□□□□□ -0.1
HSPG2-211ENST00000486901 CDK11BP21127 795 aaKnown RBP14.43□□□□□ -0.1
HSPG2-211ENST00000486901 SFPQP23246 707 aaKnown RBP eCLIP14.43□□□□□ -0.1
HSPG2-211ENST00000486901 SKIDA1Q1XH10 827 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 LMBR1LQ6UX01 489 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 ILDR1Q86SU0 546 aaPredicted RBP14.43□□□□□ -0.1
HSPG2-211ENST00000486901 CCDC82Q8N4S0 544 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 DPF2Q92785 391 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 C3P01024 1663 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 UBE2Q2LH0YL09 131 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 HIP1O00291 1037 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 PPP1R13BQ96KQ4 1090 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 UTP14AQ9BVJ6 771 aaKnown RBP14.43□□□□□ -0.1
HSPG2-211ENST00000486901 PLEKHO1Q53GL0 409 aaPredicted RBP14.43□□□□□ -0.1
HSPG2-211ENST00000486901 TNRQ92752 1358 aa14.43□□□□□ -0.1
HSPG2-211ENST00000486901 MCMDC2Q4G0Z9 681 aa14.42□□□□□ -0.1
HSPG2-211ENST00000486901 KCNB2Q92953 911 aa14.42□□□□□ -0.1
HSPG2-211ENST00000486901 ZNF609O15014 1411 aa14.42□□□□□ -0.1
HSPG2-211ENST00000486901 EPB41L2O43491 1005 aaKnown RBP14.42□□□□□ -0.1
HSPG2-211ENST00000486901 CLCN6P51797 869 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms