RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 CTSWP56202 376 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 UBE3BQ7Z3V4 1068 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 POLLQ9UGP5 575 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 RAD17O75943 681 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 SCNN1DP51172 638 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 GCKRQ14397 625 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 WASHC4Q2M389 1173 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 KLRG1Q96E93 195 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 ANKIB1Q9P2G1 1089 aa13.48□□□□□ -0.25
DDX56-212ENST00000485367 MYH3P11055 1940 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 ZNF521Q96K83 1311 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 LTBP1Q14766 1721 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 H7C1W4 665 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 TNIP1Q15025 636 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 ANKRD18AQ8IVF6 992 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
DDX56-212ENST00000485367 GPR101Q96P66 508 aaPredicted RBP13.47□□□□□ -0.25
DDX56-212ENST00000485367 F6X3S4 739 aa13.46□□□□□ -0.25
DDX56-212ENST00000485367 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.25
DDX56-212ENST00000485367 MAP1SQ66K74 1059 aaPredicted RBP13.46□□□□□ -0.25
DDX56-212ENST00000485367 IL27Q8NEV9 243 aa13.46□□□□□ -0.25
DDX56-212ENST00000485367 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
DDX56-212ENST00000485367 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
DDX56-212ENST00000485367 EYA3Q99504 573 aa13.46□□□□□ -0.25
DDX56-212ENST00000485367 BCL2L13Q9BXK5 485 aa13.46□□□□□ -0.25
DDX56-212ENST00000485367 GREM2Q9H772 168 aa13.46□□□□□ -0.25
DDX56-212ENST00000485367 DBNDD1Q9H9R9 158 aa13.46□□□□□ -0.25
DDX56-212ENST00000485367 ADAMTSL1Q8N6G6 1762 aa13.46□□□□□ -0.26
DDX56-212ENST00000485367 YDJCA8MPS7 323 aa13.45□□□□□ -0.26
DDX56-212ENST00000485367 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
DDX56-212ENST00000485367 CDC5LQ99459 802 aaKnown RBP13.45□□□□□ -0.26
DDX56-212ENST00000485367 GPRC5DQ9NZD1 345 aa13.45□□□□□ -0.26
DDX56-212ENST00000485367 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
DDX56-212ENST00000485367 UFL1O94874 794 aa13.45□□□□□ -0.26
DDX56-212ENST00000485367 ITGBL1O95965 494 aaPredicted RBP13.45□□□□□ -0.26
DDX56-212ENST00000485367 CNTROBQ8N137 903 aa13.45□□□□□ -0.26
DDX56-212ENST00000485367 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
DDX56-212ENST00000485367 PODXL2Q9NZ53 605 aa13.45□□□□□ -0.26
DDX56-212ENST00000485367 GGA1Q9UJY5 639 aa13.45□□□□□ -0.26
DDX56-212ENST00000485367 G3V3G9 751 aa13.44□□□□□ -0.26
DDX56-212ENST00000485367 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
DDX56-212ENST00000485367 USP50Q70EL3 339 aaPredicted RBP13.44□□□□□ -0.26
DDX56-212ENST00000485367 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
DDX56-212ENST00000485367 PASKQ96RG2 1323 aa13.44□□□□□ -0.26
DDX56-212ENST00000485367 E9PSI1 815 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 ECE2O60344 883 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 CASP7P55210 303 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 ADARB2Q9NS39 739 aaKnown RBP13.43□□□□□ -0.26
DDX56-212ENST00000485367 XDHP47989 1333 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 GSE1Q14687 1217 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 BEND3Q5T5X7 828 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 PLA2G12BQ9BX93 195 aa13.43□□□□□ -0.26
DDX56-212ENST00000485367 PSMD14O00487 310 aa13.42□□□□□ -0.26
DDX56-212ENST00000485367 FAM161AQ3B820 660 aa13.42□□□□□ -0.26
DDX56-212ENST00000485367 JMYQ8N9B5 988 aa13.42□□□□□ -0.26
DDX56-212ENST00000485367 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
DDX56-212ENST00000485367 BSDC1Q9NW68 430 aaPredicted RBP13.42□□□□□ -0.26
DDX56-212ENST00000485367 MKRN1Q9UHC7 482 aaKnown RBP13.42□□□□□ -0.26
DDX56-212ENST00000485367 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
DDX56-212ENST00000485367 TMEM88BA6NKF7 163 aa13.41□□□□□ -0.26
DDX56-212ENST00000485367 ITGA6P23229 1130 aa13.41□□□□□ -0.26
DDX56-212ENST00000485367 ATP2B4P23634 1241 aa13.41□□□□□ -0.26
DDX56-212ENST00000485367 IGHMBP2P38935 993 aaKnown RBP13.41□□□□□ -0.26
DDX56-212ENST00000485367 SLFN5Q08AF3 891 aa13.41□□□□□ -0.26
DDX56-212ENST00000485367 CNOT7Q9UIV1 285 aaKnown RBP13.41□□□□□ -0.26
DDX56-212ENST00000485367 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
DDX56-212ENST00000485367 SHTN1A0MZ66 631 aa13.4□□□□□ -0.26
DDX56-212ENST00000485367 H7C1D1 291 aa13.4□□□□□ -0.26
DDX56-212ENST00000485367 CSF1RP07333 972 aa13.4□□□□□ -0.26
DDX56-212ENST00000485367 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
DDX56-212ENST00000485367 SCN9AQ15858 1988 aa13.4□□□□□ -0.26
DDX56-212ENST00000485367 WTIPA6NIX2 430 aaPredicted RBP13.4□□□□□ -0.26
DDX56-212ENST00000485367 MICALL2Q8IY33 904 aa13.4□□□□□ -0.26
DDX56-212ENST00000485367 MRPL50Q8N5N7 158 aaKnown RBP13.4□□□□□ -0.26
DDX56-212ENST00000485367 C9orf78Q9NZ63 289 aaPredicted RBP13.4□□□□□ -0.26
DDX56-212ENST00000485367 CHMP3Q9Y3E7 222 aa13.4□□□□□ -0.26
DDX56-212ENST00000485367 GRM8O00222 908 aa13.39□□□□□ -0.27
DDX56-212ENST00000485367 FOXO4P98177 505 aa13.39□□□□□ -0.27
DDX56-212ENST00000485367 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
DDX56-212ENST00000485367 DPF2Q92785 391 aa13.39□□□□□ -0.27
DDX56-212ENST00000485367 MPHOSPH8Q99549 860 aa13.39□□□□□ -0.27
DDX56-212ENST00000485367 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
DDX56-212ENST00000485367 ANKRD18BA2A2Z9 1011 aa13.38□□□□□ -0.27
DDX56-212ENST00000485367 TRAF5O00463 557 aa13.38□□□□□ -0.27
DDX56-212ENST00000485367 ALDH1L1O75891 902 aa13.38□□□□□ -0.27
DDX56-212ENST00000485367 RPS12P25398 132 aaKnown RBP13.38□□□□□ -0.27
DDX56-212ENST00000485367 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
DDX56-212ENST00000485367 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
DDX56-212ENST00000485367 FMR1Q06787 632 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDX56-212ENST00000485367 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
DDX56-212ENST00000485367 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
DDX56-212ENST00000485367 ANKRD2Q9GZV1 360 aa13.37□□□□□ -0.27
DDX56-212ENST00000485367 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
DDX56-212ENST00000485367 VIL1P09327 827 aaKnown RBP13.37□□□□□ -0.27
DDX56-212ENST00000485367 IFIT5Q13325 482 aaKnown RBP13.37□□□□□ -0.27
DDX56-212ENST00000485367 TBC1D10BQ4KMP7 808 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms